Homarus americanus (American lobster): 121853082
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Entry
121853082 CDS
T07477
Name
(RefSeq) uncharacterized protein LOC121853082
KO
K04985
polycystin 1
Organism
hame
Homarus americanus (American lobster)
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hame03037
]
121853082
04812 Cytoskeleton proteins [BR:
hame04812
]
121853082
04040 Ion channels [BR:
hame04040
]
121853082
04091 Lectins [BR:
hame04091
]
121853082
Cilium and associated proteins [BR:
hame03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121853082
Cytoskeleton proteins [BR:
hame04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
121853082
Ion channels [BR:
hame04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121853082
Lectins [BR:
hame04091
]
C-Type lectins
Group 10: Polycystin
121853082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
REJ
PLAT
Ion_trans
WSC
Motif
Other DBs
NCBI-GeneID:
121853082
NCBI-ProteinID:
XP_042202945
LinkDB
All DBs
Position
Unknown
AA seq
3003 aa
AA seq
DB search
MNIKVLTVLTLLTAVLQVVWAPPVATFIDCVTATPAVPAFYYMALGPTFDTDIVAKCSQS
CLQSGYQYAGISEGTYCFCSALFDPAAAVSAPLCDFLCDGLACGTEDSNVFAAYDTGGGS
PAFTMVATNDPVTVQVDLTPEALGASFLVDLDVEAPPSYLTLASISTPGFLVPGLYTVKV
LAMIEGTKLSSYDETNLTQEAIPVIDEVACPIVWEPNELYYCNVSVTMQNELDSYTSTFS
DDLSAFSITGIGSEIYRLGTPPPRGISLEVAAPYSDIDEIRKAVPISRASQLLALDFYAY
AAGDITAGIIRPTCAGGVYSVDVGGCMTLPPDDPDGLIHTCEATGTFWPQEPTCGDGAGV
GMVEEAPATWAFVPGASVTMTFVEPGFYRELLAAPVDLLPGDTISATGPVGKSPVERQWG
DVVDGVPTTSHHYVAAVVKEKMPIQLAHICTTINVDVTLDVVDDDATAAALANHTSCERN
ITDIALVISQIETDLFNTTVNYVEPYYIRSNTDADFIFVFSVAGPTTFTLAYDPPIGLNN
TFVDLTDYPLGLAPHNKTEVLQMADDFVYIITVYAANQHNDLTGPVSNTAILYVQHPVLP
TWTVAPNHPVGFMIPSQLGEIIFINSDTLANFPTNASAYVEWGDGITQTLPFEHSGDKQP
ILKHNYTNHGIYNISVYIYNVVSGYNVSCQILIVEEIINFEVYVKYFPSETSTTPRDGFG
KYKNQYPLDKNLTFFPVMAQGTVSQYVAYNDTSTLEMFTFDVIDMFNPIEIPFKFHIDYE
TFVNMTVYAINVFQSVPVRLFIEIVGQVRNCMIDDFSDVVDQFEEKKFMVSYESVGAGTC
LVIHWGDTDLSLVDTWGENITCQGKYPDATYHEDPFLDMIMNISHTFTWRSLFNVSIYAF
NDLSFCSHRLMTVVTDIKCKPPIVSIIQGSISHETPLSFVKSKAANIYTLASLDCDLTST
TKKRWQLYRANGTGDLEAYIPTMDVIPSWNKAHLSIPKLHLDYNMYVAWYTITMWDDAIP
PGWTFQKRTMTYFEIGQTPLIPILMENAVSKVIRGVTQDLLLQPGTLSIDPDDPDNKNFK
VEWRCRKIEEAWPASDTTAKLMSPVAGGGGCFGHGPGLLDYAGTELLIAGDEFVAINQVY
EFQATVSKDVRTEAVIGQVHIVDYVAPVLTMRCASPALCKPFGDGVYMNPSSRMAIIAEC
LEACDGPLDYDWAATDVDGNLFPQNTDYFPLGFDNNEVSFSTQFFDDNPDLTDFHLSLSG
VNSFNRKGFASFFMKVNKRPENGYCQVIEPPTRLALVDTYTLVCDEWTDPEDIGVTHYVV
NLINELGTRSTVLEMKHFPITPQQEPMVLPPGKLLVEVKVYDEWGAYTVVNVADLEVLMP
NEDQVDQAAIEAYIAELQGAGDVQLLNMVLYAQSKVIQEAPWLSLDESLPEDELNARIIK
IAEANNVALAAIKENTNYDTLASVNIAAGIMSSILDYSLQTQYTLQTIDTKAREKVLDVS
EDAISSIMELDVPEPNDLVQLVTLIAGNNMAMGKNQATFGSKPEEGCFAVPSDFKDKDSF
DYNSEVTGLDMVQEADPDVAAKCHITDTTRETAVKMVPDSDKVLHNVSMKMMGGYVVGET
HEFQTSNGVYIKMGVVRRKDLIKLDIGITGSSVGLQNAFCPQLNCSMEMPFGFIIREWPV
ILHSFPKTVDKLSKGTKVIDYELYSRDLEVLVIQDLPPTQTIKVTISKTYGEDGNTTLPA
MTKVNAIKASAKKTIPVMYSTFNVTTSDSAISLEILPDNVTNRLFLMIDKPRLPTLKHNM
RFYFVKDLTLNDGIYSVFILAKDLAGIGRYFVGVGEFEDNFKISHMANPVKKKVKMNVVK
NMTTDFLLRITVNSVAFMNLTTLNWESGGLNVTKATQTLTYLDSSHLTSFGSGMFVMPNT
IDFNYVFANMGFSDNLTIYLTLIISLSIFLILLVWARVKDKKDVEKLGAAPLPDNKVEDK
YLYEILVFTGNLKGAQSDSIVQFIVSGDDDETDVRTLGDDKRKILRKADVDVFVMAVPRP
LGALQFLRVWHDNSGKGPNASWYLSYVVFRDVQTGDKYEFIANKWLAVESDDGQIDRILP
VAGKAQKREFQHLFQNTSNKNIADGHLWFSVFLRPPRSRFSRCQRVASCFALLFLSMLVN
AMWYDRVPEQPGTGGLKIGPFSLSPEQIGVGVMSNLIVFPPSFLIVFLFRNARPRVLRKS
RIEQAVERTRTSKRPGSSSSTRSLINSEQPPDKTPHSPDSADVPDITTKKIIEKKQKKKK
FTLPWLFALVAWLLVVGCIAVSCFFLLMYGVMFGNSKATKWITSLVISFFTSILFIEPLK
IFLMAILMSAIFKSGNLDEDDADEDEEDPLLEQDEAWLHKGERNKQTLHHNKVDEDILEK
LRKARKKEIEMWVILKEIFAYSCFLWVFLIITYGNRDPNAYLLQMNLRHSFLHEGNLDGL
DFTKVTNTDRLWYYLFHGLLNPLRAQRTYNDKPPYGLRGFLNDQCNRIMGYATIRQIRIK
DKTCRVPSALSYFGRNCSGYTTIFNEESRHYCAGWQLPNKYTANSPMCSIEEFRYSTAAQ
MQSLPIWGQRDWYSGGGYVIHLKGKTPDIMRKFRQLQRNHWIDEKTRAVIIEFSAYNTQV
NLFGMSLIIAEFTPGGGITPNFRFEGIRLLQHHDNFGIFIIACEVVFILFVIYFTVLETF
RFYKQRLEYFNNYWSYAEISIIVASYSAMIVYGIRYMATNDVLTTFDRTFGNGYVKLQYA
ASLDEMYGYIIAFIVFVGTLKFIKLLRFNKRMGVLSATLRQCWDDLSGFLMAFFLCFFSF
VALFFLLLNQYMLGFYNFLSAIETSFSMMLGKFQFEEMKQASYVVPFMFFIFVLFNSWVL
INLLLTVIIKSFTQVKHDLLKQPNEYEMVAFVWGRFQTFLGMGGPSQVSPVLNTTKKAKE
EEAQENKNVQEFPNKVDKFLDYLNTTYFDGTLDMSRKDALKSSMYKNPGTREGSGRFNTR
SSE
NT seq
9012 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaaagtgctgacagtgctgacactcctgacggcggtgctgcaggttgtctgg
gcgcccccagttgcaacgttcatcgactgcgtaacggccactcctgcggtgccagcgttc
tattatatggcacttggtcccacgtttgacactgacatcgtggcaaagtgctcccagtcg
tgcctacaaagtgggtaccagtatgcgggcatcagcgagggaacatactgcttctgttca
gcattgtttgaccccgccgcggccgtgagtgccccgttgtgtgacttcctctgtgacggt
ctggcttgtggtaccgaggatagcaatgtgttcgcggcctatgatactgggggtggaagt
cctgcgtttaccatggtagccactaacgatcctgtcaccgtacaagtggacctgactccg
gaggccctcggggcgtctttcctcgtggacctggatgtagaagccccgccctcctacctc
accctcgcctccatctcgacacctggttttctcgtgcctggactctataccgtcaaagtg
ctggccatgatagaggggacgaagctgtcctcgtatgatgaaactaacctgacccaggag
gccataccagtgatagatgaagtcgcctgtcctattgtatgggagccaaatgaactatac
tactgtaatgtctcggttacgatgcagaatgagctggactcgtacacctccaccttcagc
gacgacctctcagccttctccatcactggcattgggtcagagatctaccgtctgggcaca
ccacctcccaggggcatcagcttagaggtcgccgctccatactcggacatagacgagatc
cgtaaagcagtgccaatctcccgggcatcacagctcctcgctctagacttttatgcttat
gctgcgggcgacatcactgctggcattatccgtccaacgtgcgccggtggagtatattct
gtggatgtgggaggctgtatgactctaccccctgatgaccccgatggtctcatccacacc
tgtgaggccactggtaccttctggcctcaggaacctacctgtggggatggcgctggtgtt
ggaatggtggaggaagcaccggcaacatgggcgtttgtgccaggtgcttccgtcacaatg
accttcgtagagccaggtttctatcgtgaactgctggctgctcctgttgacctcctgcct
ggtgatactatctctgccactggaccagttggcaaaagccccgtggagagacagtgggga
gacgtggtcgacggtgtgcccacgacctcccatcactacgtagctgccgtcgttaaggag
aagatgcccatacagttagctcatatctgtaccactattaatgtagatgttaccctcgat
gttgtagatgatgacgccaccgccgctgctctggctaaccacacctcttgtgaacgaaac
atcactgacatagcgctggtaatatcacagatagagactgacctcttcaacaccactgta
aactacgttgagccttactacatcaggtccaatacagacgctgacttcatattcgtgttc
agcgtggcggggccgactacctttaccttggcatatgatccacccattggcctcaataat
acctttgttgatttaacggactacccacttggccttgcaccccacaacaaaacagaggtg
cttcagatggccgatgacttcgtgtacatcatcacagtgtacgcggccaatcagcacaat
gatctaacagggccagtatcaaacacggctatcctgtacgtccaacacccggtgctgccc
acctggactgtggctccaaatcatcctgttggtttcatgatcccgtcccagcttggtgaa
atcatcttcatcaattcagacaccttggctaatttcccaacaaacgcctcagcatacgta
gagtggggagacggcataacacagaccttacctttcgaacattctggggacaaacaaccc
atcttgaaacacaactacacaaatcacggcatctacaatatctccgtctatatctacaat
gtcgtctcaggatacaatgtctcttgtcagattcttatcgtggaggaaattatcaacttc
gaggtatacgttaaatatttcccgagtgagacgtcgacaactcctcgagacggcttcggc
aaatataagaaccagtatccattggacaagaatttaacttttttcccagtgatggcacaa
gggactgtgagtcagtatgtggcgtataatgacacgtccactctagagatgtttacattc
gacgtcattgatatgtttaacccaatagaaatccctttcaaattccacattgattacgaa
acgtttgttaacatgacggtgtacgccataaacgtcttccagagcgtcccagtgaggctc
tttatagagatcgtcgggcaagtgaggaactgtatgattgatgacttctcagacgtcgtg
gatcagtttgaggagaagaagttcatggtgagttatgagagtgtgggagcagggacgtgt
ctcgtaattcactggggtgacaccgacctctctctggtcgacacgtggggcgagaacatc
acctgtcagggtaaataccccgacgccacctaccatgaagatcctttccttgacatgatc
atgaatatatcacacacctttacgtggcgttccctgttcaatgtctctatctatgcattc
aacgatctcagtttctgctcacatcgcctcatgaccgttgtgacggacatcaagtgtaaa
ccaccaattgtatccattatacaaggttccatcagccacgagacgcccctgtccttcgtt
aagagcaaggcagccaacatttacacactcgcctccttggattgtgacctcaccagcacc
actaaaaaacgttggcagctgtacagagcaaacgggacgggagacttagaggcgtacata
ccaaccatggacgtcatcccctcctggaacaaggcacatctatcaatacctaagttacac
ctggactacaacatgtatgtggcctggtacaccatcactatgtgggatgacgcaatacct
ccaggttggacattccagaaacgaacgatgacatattttgaaattggccagacgcctcta
atacccatactgatggagaatgctgtgagtaaagtcatccgcggggtgactcaggacctc
ctccttcaaccgggtactctctctatagaccctgatgatcctgataataagaatttcaaa
gtagagtggcggtgtcggaagatagaggaggcttggcctgcttctgacaccacagcaaag
ctgatgtcaccagtcgcaggtggtggtggttgctttggtcatgggccaggtctgcttgat
tacgctgggacagagttgttgatagcaggtgatgagttcgtggccattaatcaggtgtac
gagttccaagcgactgtctccaaggatgtccgcactgaggctgtgattggccaagtgcac
attgtagattacgtggctcctgtcctgactatgagatgtgcatcaccagcactgtgtaaa
ccttttggagatggagtgtacatgaatccttccagtcgcatggccattattgctgaatgt
ctggaagcctgtgatgggcctctcgactacgactgggcagctacagatgtcgacggcaat
ctcttcccccaaaacacagactattttccacttggttttgataataacgaggtctccttc
agcactcagttcttcgatgacaatccagacttgacagattttcatttgtccctctctggt
gtcaactctttcaacaggaaaggttttgcctcattcttcatgaaggtcaataagcgacca
gagaacggttattgtcaggttatcgagccacccacacgccttgccctcgttgacacatat
accctagtctgtgatgaatggacagacccagaggacattggtgtcactcactacgttgtt
aatctaatcaacgaacttggcacgagatccacagtactggagatgaaacacttccccatc
acccctcagcaggagcccatggtactcccgcctggtaaactgctggtggaggtgaaggtg
tatgatgagtggggcgcctacaccgtcgtcaacgttgccgatctcgaggtattaatgcct
aatgaagaccaagttgaccaggcagctatcgaggcctacatcgcagagctacaaggtgct
ggcgatgtacagctgctgaacatggtgctctatgctcagtccaaagttattcaggaggca
ccgtggctgtctctagatgaaagtttacctgaggatgaattgaatgctcgaatcataaaa
atcgcagaagcaaacaacgtagctctggcggccataaaagagaacactaactacgacact
ctggcctctgtcaacattgctgcagggatcatgtcatccatcttggactactcgctgcag
acgcagtatactctccagaccatagacactaaagctcgcgaaaaagtcttagatgtgtca
gaggatgcgatcagcagtattatggagttagatgtaccagaaccaaatgacctcgtacag
ctggtgacccttattgcaggcaacaacatggccatggggaagaatcaagcaacgttcggt
agtaaaccagaggaagggtgtttcgccgtgccctctgatttcaaagataaggatagcttt
gattataattctgaagttactggtttggacatggtacaagaagctgaccccgatgttgct
gctaaatgtcacatcacggacaccacgcgggaaacagctgtgaaaatggttccagactca
gataaagtcttacacaatgtttcgatgaagatgatgggaggttacgtggtgggggaaact
cacgagttccaaacatccaatggcgtctacataaaaatgggcgtagtacgaaggaaggat
ttgattaaattagacattgggataacaggcagttctgtggggctgcagaacgctttttgc
cctcaactcaactgttcaatggagatgcctttcggatttatcattcgggagtggccagtg
atcctgcatagcttcccgaaaacagtggataaactttcaaaagggacgaaggttattgac
tacgaactgtactcgcgtgacttggaggtgctggtgatccaggacctccctcctacccag
acaattaaagtgactatttccaagacgtatggggaagacggcaacacaacactaccagca
atgacgaaggtgaacgccattaaagcatctgctaaaaagaccataccggtgatgtattct
accttcaacgttaccacgagtgactccgccatcagcttggaaattttgccagataatgtc
accaaccgcctctttctgatgatagacaagccccgtttgccaactctgaaacataatatg
agattctattttgtaaaagacctcacactgaatgatggtatatatagtgtgttcatccta
gctaaagatcttgccggcattggtcgatatttcgtgggtgttggagagtttgaggataat
ttcaagataagccacatggccaaccccgtcaagaaaaaagtcaaaatgaacgtggtgaaa
aacatgacaactgacttcctgctgcgcatcactgtcaatagcgtggcatttatgaacctc
accacactgaactgggagtctggaggtctaaatgtgacaaaagccacccaaaccttgact
tatttggacagtagccatctgacgagcttcgggtcggggatgttcgtcatgcccaacact
atcgacttcaactacgtgttcgccaatatgggattcagcgacaacctgaccatctacctc
accctcatcatctccctctccatcttcctcattctcctcgtgtgggcgcgtgtaaaagac
aagaaagacgtagagaagctcggtgctgccccgctgccagacaataaggtagaagacaaa
tacttatacgaaatcctagtctttacggggaacctcaaaggcgcacagagtgactccatc
gtgcagtttatagtgtccggtgacgatgatgagacagatgttcggacacttggagacgat
aagagaaaaattcttcgcaaggctgatgtggatgtctttgttatggctgttccaagacct
ctgggagcactacagttcctcagggtctggcatgacaacagcggtaagggacccaacgcc
tcctggtacctcagctatgtcgtgttcagggatgtccagacaggcgacaagtacgagttt
attgctaacaagtggctggctgtggagagtgatgacggtcagattgaccgaattcttcca
gtagccgggaaagcacagaagagggagttccagcacctcttccagaacactagtaacaag
aacattgctgatggtcacctctggttctccgtcttcctccggcctccccgctcacgtttc
tcaaggtgtcagcgagtggcctcttgttttgctctcttgttcctctccatgttggtcaac
gccatgtggtacgaccgagttcctgaacagcccggaacaggaggtcttaagattggtccc
ttcagcctgagtccagagcagattggtgttggagtaatgagcaacttgatcgtgttccca
ccatccttcctcatagtgttcctgttccgtaatgctcgtccaagagtcctgcgcaagtca
cgcatcgaacaggctgttgagaggactcgcacgtcaaagaggccgggcagttccagcagc
actcgttctcttattaactccgaacagccgcccgacaaaacaccacatagtcctgactca
gcagatgtccctgatataacgacgaagaaaataattgagaaaaaacagaagaagaaaaag
ttcacattaccttggttgttcgccctggtagcttggctcttagttgtgggctgtatcgcg
gtgtcttgcttcttcctcctcatgtacggcgtcatgttcggcaactctaaggctaccaag
tggatcacctccctcgtcatctccttcttcacctccatcctcttcatcgagcccctcaag
atcttcttgatggcaattctcatgagcgccatctttaagtctggtaacctggacgaggat
gacgctgacgaagacgaagaagacccgctgttggagcaggatgaagcctggctacacaaa
ggagaaagaaacaaacaaactctccaccacaacaaagtggacgaggatatcttggagaag
ttgaggaaagccaggaagaaggagatagaaatgtgggtcatcctgaaggagatctttgcc
tactcctgtttcctgtgggtcttcctcattattacatatggcaacagagaccctaatgca
tacctcctgcagatgaacttgagacattctttcttacacgagggtaacctggatggtcta
gattttacgaaggtgaccaacactgatcgtttatggtactacttatttcatggactcctc
aatcctctgagagcccagcgtacgtacaatgacaagcctccatatggcctgcggggcttc
ctcaacgaccaatgtaatcgcatcatgggttacgccaccatcagacagatacgtattaag
gataaaacttgcagggtaccaagtgcgctgagctactttgggcggaactgcagcggctat
acaactatattcaatgaagaatctcggcactactgcgctggctggcaactacctaataaa
tacactgccaactctcccatgtgttctatagaagagttcaggtactcaactgcagcgcaa
atgcaaagtcttccaatctggggacaaagagattggtacagtggtggtgggtacgtcatc
caccttaaaggcaaaacaccagatattatgaggaaatttaggcaactacaaagaaaccac
tggattgacgagaagactcgagctgtcataattgaattctcggcctacaacactcaggtt
aacttgtttgggatgtcgctgatcatagcagagttcaccccagggggaggcatcacaccc
aacttcaggtttgagggtatacgactactacaacaccacgacaacttcggtatttttatc
atcgcttgtgaggttgtgttcatcctcttcgtcatctacttcaccgtgttagagacgttc
cgcttctacaaacaaaggctcgagtacttcaataattattggtcctatgctgagatttct
atcatcgtggccagctactctgccatgatcgtatatggcatcaggtatatggccacaaac
gatgtcctcacgacgtttgacaggacctttgggaatggttacgtgaagcttcaatatgct
gcctcgctggatgagatgtatggctatatcatagccttcattgtcttcgtaggcacactt
aaattcatcaagcttctgaggttcaacaagagaatgggtgtcctctcggctactcttcgt
cagtgctgggatgacctcagtggtttcctgatggcgttcttcctctgtttcttctccttc
gtcgccttgttcttcctgctgctcaaccaatacatgttgggcttttataacttcctcagt
gccatcgagacctccttcagtatgatgcttggcaagttccagtttgaggagatgaagcaa
gcgtcatacgtggtccccttcatgttcttcatcttcgtgctgttcaactcatgggtgctc
atcaacctgctgctgaccgtcatcatcaagtccttcacacaggttaagcacgatctcctg
aagcagcccaatgagtacgagatggtggcatttgtgtggggtcgcttccagaccttcctg
ggcatgggaggcccgtcccaggtgtctcctgtcctcaacactactaaaaaggccaaagaa
gaggaagcacaagagaacaagaatgtccaagaattcccaaacaaagttgacaagttcttg
gactatctgaatacaacttactttgatggcacccttgatatgagcaggaaagatgccctc
aagtcctctatgtacaaaaacccaggaacccgtgaaggaagtggccgctttaataccaga
tcctcagagtga
DBGET
integrated database retrieval system
