Homarus americanus (American lobster): 121870130 Help Entry 121870130         CDS       T07477                                  Name (RefSeq) DNA ligase 1-like isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism hame  Homarus americanus (American lobster) Pathway hame03030   DNA replication hame03410   Base excision repair hame03420   Nucleotide excision repair hame03430   Mismatch repair Brite KEGG Orthology (KO) [BR:hame00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     121870130    03410 Base excision repair     121870130    03420 Nucleotide excision repair     121870130    03430 Mismatch repair     121870130  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:hame03032]     121870130    03400 DNA repair and recombination proteins [BR:hame03400]     121870130 Enzymes [BR:hame01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      121870130     6.5.1.6  DNA ligase (ATP or NAD+)      121870130     6.5.1.7  DNA ligase (ATP, ADP or GTP)      121870130 DNA replication proteins [BR:hame03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     121870130  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      121870130 DNA repair and recombination proteins [BR:hame03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      121870130    NER (nucleotide excision repair)     Other NER factors      121870130    MMR (mismatch excision repair)     Other MMR factors      121870130 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  121870130 NCBI-ProteinID:  XP_042227834 LinkDB All DBs Position Unknown AA seq 1121 aa AA seqDB search MVQKTILSFFSAPKVKKPDEGASGGSSQGENKNTKNDYTEEDDSPVKKTPRHKARVIESD SEEEGEQVPSTSSSPHKSDEEKENMTKTSQETSTNKEEENVKDQSTKQSNGSPSTKKDVN TKKKKTAMKKSLTTKKGVNANKEKKKQTKRKKIPVPRPSQKKNKVEDENKNLEETELKES DDEARDTDTKDDKSTGSEKNSAAEDEEEMETEGSDEDTKTDNKMQEDQEDEIKEDASTEK KENEMKESKNEPTPGSSKFSTVTTPEKSSTSSLKRSPGFTPETVPPIRKTARKQMKRKSD SLESKQTEMVKRLKGDNETSSTSNKEGTGDEDSELEKDEEENLENKKQKDVKESMEVDNC DDAVENKESPVKTKEKAAQGRLKPKAIHSFFAPRPAKQNDTSLTTKSCVEEDEASEEEND SSPRKKDKSQKNESSPGKDSSKASSMAKKPVINPFAPKPAGADDMGASYNPAKSKYHPIT DAFWKRNEKVPYLALAKTMELIEKTSGRLKTIEILANLFRSVIVLSPDDLLHCVYLCLNK VAPAFEGVELGIGETILMSAIAQASGRSMEKIKLDAEQKGDLGIVAEQSRSNQRIMFQPA KLTVRAVFDKLKDIALMTGNASRSKKVDKVKGMFVACRFSEARYLIRSLGGKLRIGLAEQ SVLQAIAQACFLTPPGQEYPPEVADAGKGIHPDNLKTKLDNYGFILKTTYCEFPSYDEII PILLNEGLEELPNRCQLTPGIPLKPMLAHPTPGVSEVLKRFENAKFTCEYKYDGERAQIH LKEDGTVNIYSRNQEDNTSKYPDIIARLKGALGEEVKSCVIDSEAVAWDREKKQILPFQI LSTRRRKNASESEIKVQVCVFPFDLLYLNGKPLVREPFEQRRALLREHFKEVEGEFVFAK SMDSTNTEDIEEFLEESIKGNCEGLMVKTLDVDATYEISKRSRNWLKLKKDYLDGVGDTI DVVVLGGYMGKGKRAGHYGGFLLACYDPDNEEYQTLCRIGTGFTDEELQTHSAFFKDHII EKPKSYYRYENSVAPDQWFDAVQVWEIKCADLSISPVHKAAAGIVDREKGISLRFPRFLR IREDKVPEDATSASQIADLYNSQDQIKNKKSSGKTVEEDFY NT seq 3366 nt NT seq  +upstreamnt  +downstreamnt atggtgcagaagaccatactgtcatttttctcggcccctaaggtgaaaaagccagatgaa ggagcatctggaggaagctcacaaggagaaaataaaaatacaaagaacgactatacagag gaagacgattctcctgtgaaaaaaacgcctcgtcataaagcccgggtaattgagagcgat agcgaggaggagggggaacaagttccctctacaagttcttcacctcataaatctgatgaa gaaaaagaaaatatgaccaagaccagccaagagacaagcacaaacaaggaggaggagaat gtgaaggatcagagtacaaaacaatccaacggtagtccttctacaaagaaagatgttaat actaagaaaaaaaagactgccatgaagaaaagtcttacaacaaagaagggagtaaatgca aacaaagaaaagaagaaacaaacaaaacgaaagaagatcccagtcccaagacccagccaa aagaagaacaaggttgaagatgagaacaagaacttggaggagacggagttaaaagaatca gatgacgaggcccgggacacagatacaaaagatgataagagtacagggtcagaaaagaac tcggcagcagaagacgaagaagagatggagacggaaggtagtgatgaagatacaaagaca gacaataaaatgcaggaagaccaagaagatgagataaaggaagatgctagtacagaaaag aaagaaaatgaaatgaaggaaagtaagaatgaaccaactcctggttcatcaaagttcagt actgttaccaccccagagaaatcatccacttcatcgttgaagaggtctccgggattcaca ccagaaactgttccacccatcagaaaaacagctcgtaaacagatgaaacgtaagagtgac agtctggagagtaaacaaacagagatggtaaagaggctgaaaggagacaatgagacatcc agtacatcaaacaaggaaggcactggagatgaggactcggaattggagaaagatgaggag gagaacttagagaacaaaaaacaaaaggatgtaaaagaatcaatggaggttgacaattgt gatgatgctgttgaaaataaagagagtccagtcaaaactaaagagaaggccgcacagggc aggcttaaacccaaagctatccacagtttttttgctcccagaccagcaaaacaaaatgat acatccctgaccactaagagttgtgtggaggaggacgaggcatcagaagaagaaaatgac tcgtctccacggaagaaagataagtctcaaaagaatgagtcgtcacctggcaaagattcc tcaaaagcttcaagtatggcaaagaaaccggtgataaatccctttgctcccaagcctgct ggtgctgatgatatgggtgccagctataacccggccaagagtaaatatcatccaatcaca gatgccttctggaaacgcaatgaaaaagtgccttatcttgccttggccaaaacaatggaa ctgattgagaagacaagcggccgactcaagacaattgaaattctggctaatttattccgc tcagtaatagtgttatcacctgatgacctcctgcattgtgtgtacctgtgtctcaacaaa gtggctcctgcttttgaaggcgttgagttgggcatcggagagacaatcttgatgagcgcc atagctcaggcgtcaggacggagtatggagaagataaagctggacgcagagcaaaaagga gatcttggaattgtggcagaacaatcacggtccaaccagaggataatgttccagccggcc aagttgactgtccgagcggtgtttgacaagctgaaagacattgctctcatgaccggcaat gcatcacgaagcaagaaagtagacaaagttaaaggtatgtttgtagcctgtcgtttctct gaggcaagatatctcattcgctcccttggtggaaagttgcgcattggcctggccgagcag tctgtactgcaggctatagctcaggcatgcttcttaactccacctggccaagagtatcca ccagaagttgctgatgcagggaagggtattcatcctgataatttgaagacaaaattagac aattatggattcattttgaagacaacatattgtgaattcccatcctatgatgagatcatc ccaattctcttgaatgaaggacttgaggaactcccaaatagatgtcagttgacaccaggc attccactgaagcccatgttggcacacccgacccctggggtgtcagaagttctgaaacgt tttgaaaatgccaagttcacctgtgaatataaatatgatggagaaagggcgcaaatccat cttaaagaggacggtacagtaaatatttacagcaggaaccaggaggacaacacctccaag tatcctgacatcattgcacgactcaaaggtgcactcggggaggaagtgaaatcttgtgtt attgattcagaagctgtagcgtgggatcgtgagaaaaaacagatccttcccttccaaata cttagcacacggagaagaaaaaatgccagtgaaagtgagattaaagtacaagtgtgtgtg tttccatttgacttgctctacttgaatggtaagcctctagtgcgcgaaccttttgagcag cgtagagctcttttaagagagcatttcaaagaggtcgaaggagagtttgtctttgccaaa agcatggactccacaaacactgaagatattgaagagttcctggaggaatctattaaagga aactgcgaaggcctcatggtcaagacccttgatgttgatgccacgtatgagatatccaag cgttcacgtaattggctgaaactgaagaaggactaccttgatggggtgggagatacaata gatgttgtggtactgggaggctacatgggaaagggcaaacgtgcaggccactacggaggt ttcctcttggcatgttatgatccagataatgaagaatatcagacactttgcaggattggg actggcttcactgatgaagaactacagacacactcggcattcttcaaggatcatattata gaaaaaccaaaatcttactatcggtatgagaacagtgtagctcctgatcagtggtttgac gctgtacaagtgtgggagatcaagtgtgctgatctctctatatcaccggttcataaggct gctgcaggaatcgttgatcgcgagaaaggtatatctttgaggttcccaagattcttgcgt atcagggaggataaggtgccagaggacgccaccagtgcatcacaaattgctgatctctac aatagtcaagatcaaataaagaataaaaagtcatcaggaaaaactgtagaggaagatttt tattaa

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