Homarus americanus (American lobster): 121876058
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Entry
121876058 CDS
T07477
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03022
Basal transcription factors
hame03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121876058
09124 Replication and repair
03420 Nucleotide excision repair
121876058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hame03021
]
121876058
03400 DNA repair and recombination proteins [BR:
hame03400
]
121876058
Transcription machinery [BR:
hame03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
121876058
DNA repair and recombination proteins [BR:
hame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
121876058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
121876058
NCBI-ProteinID:
XP_042236876
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MLEDDDPKEYRWESGYEKTWEAIQEDESGRLEPSVTEMIQRAKRRRLLDREASVRLGIMR
HVYIILDLSQAMSEQDLKPTRQICTLKILEDFIQEFHDQNPISQLGIITTQNKVAKRHSE
LSNNPQRHLDCIKKLRELPARGEPSLQNSLEVALSSLRHLPPHTSREILIIFAALTTCDP
GEIAATLQKVKDANIRVSVVGLAAELHVCKEISKDTGGSFSVSINDLHLKELIHEHLEPP
PASVKMDHTLIKVGFPHQINADAKPALCMCHLDDLPLLNTRGYYCPQCTAKYCDLPAECR
VCGLMLVTAPHLARSYRHLFPLKHFDEIVAEEISTKHCYGCLKQFTGCTADKRVYVCRTC
KQVFCFNCDIFLHETVHSCPGCASNPTISQFNSN
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaggacgatgaccctaaggagtaccgctgggagagtggatacgagaaaacatgg
gaagcaatacaagaagacgaatctggtcggctggagccatcggtgactgagatgatccag
agagcaaaacgacggagactgttagatcgtgaggccagtgtgaggctgggaataatgcgt
catgtgtatatcatcctcgacctctctcaagcaatgtcagaacaggacctgaagcccaca
cgacagatctgcactctgaagattcttgaagattttatccaagagtttcatgaccagaac
ccgatcagtcagctgggaataattaccactcagaacaaggtggccaagagacacagtgaa
ctaagtaataacccacaaaggcatcttgattgtatcaagaagctacgggagttgcctgcc
agaggagaaccatcactacagaactctctggaagtagcactatcctctctccgccacctt
ccaccacatacctcaagagagatcctcattatctttgcagctctgactacctgtgaccca
ggggaaattgcagccacactacagaaagtgaaggacgcaaatattcgtgtgtcagtggtg
ggtcttgcggctgagcttcatgtgtgcaaagaaatcagcaaagacactggaggctccttc
tcagtcagtattaatgacctccacctgaaggagttgatccatgaacacttagaacctccg
cctgcatctgtaaaaatggatcacacgctcataaaagttggctttccacatcagattaat
gctgatgctaaacctgctttatgcatgtgccacctggatgatctccctcttcttaacact
cgtggctattattgcccccagtgtacagctaaatactgtgaccttcctgctgagtgccgt
gtgtgtggtctcatgttagtgacggcaccacatcttgcccgatcatacaggcatctcttc
ccactgaagcacttcgatgagatagtggcagaggagatctcaactaagcattgttatggt
tgtctgaagcagttcactggatgcactgctgataaaagagtgtatgtgtgtagaacgtgc
aaacaagtgttttgcttcaactgtgatatcttcctccacgaaacagttcactcatgccca
ggatgtgcatctaatcctacaatatcccagtttaatagtaattag
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