Helianthus annuus (common sunflower): 110878972
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Entry
110878972 CDS
T05101
Name
(RefSeq) DNA ligase 6
Organism
han
Helianthus annuus (common sunflower)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
Lactamase_B_2
UBA_4
RMMBL
Med14
Anticodon_2
Motif
Other DBs
NCBI-GeneID:
110878972
NCBI-ProteinID:
XP_021983066
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All DBs
Position
9:complement(140509643..140515949)
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AA seq
1369 aa
AA seq
DB search
MSSSSSHHSKTLTLDSTTLFLNSPQTTTTPLPPIPTDFPLSKLIPKTKFIIDGFRFSGDH
SISYFLTHFHSDHYTGLNSTWNKGIIYCSPTTARLLIQVLNVSSSFVVSLPLSKPVSIDG
CEVSLIDANHCPGAVQFLFRVPTEEGNWMRYVHTGDFRYCGSMKSDPVLSEFIGADAVFL
DTTYCNPKYVFPSQDESIDYVVNVINKYSVDNGNGNGNGNGVKSVLFLVATYVIGKEKIL
LEISRRCGRKIQVEDRKLGILRTLGFGEDGVFTNEECESDVHVIGWNVLGETWPYFKPNF
VKMKEIMEARGYSKVVGFVPTGWTYEVKRNKFAVRVKDSFEIHLVPYSEHSNYEELREYV
KFLRPKRVIPTVGVDVENVDGKHVNKMLKHFAGLVDEMAIKQDFLMGFHRGPKELNGSLE
KNSHNLKEKVSEPEKEEHGSRDSVLVTDKEMDEMILELHDCLPAWVTRDQMMDLISKSDK
NVVEAASYFFEHETEYHEQVITSTSASASQESSVDILKHVIAHASSTCTPVKTFTKGFAS
SSTPIKTKLKTEGSPSSKRKKPSSTKQSSKNNASPSQKRKTSETKSSKKPIATSQLETSG
PKQCTITKFFNKATPTAEPSQNDDKVLPSIDITHYKDEVDQFIQIVNGSESLRSYATTIL
EETKGDINKALDLYYTNSKDKQSEDTEVSMKDNVDKTCSKQSKESLTPQPPAGNVASDLV
SLPPEKYSPTDHACWKEGQSAPYLHLARTFSLLEDEKGKIKATSMLCNMFRSLLILSPED
VLPAVYLCTNKIAPDHENMELNIGGSVVTAAMEEACGTNRSKIRDLYNSLGDLGDVAQLC
RQTQKLLAPPAPLSIRGVYSVLREISVQTGSGSTMRKRSLIVNLMRSCREMEIKFIVRTL
VRNLRIGAMMRTVLPALAHAIVMNSCQGKTIENLKEMLQGLSAAVIEAYNILPNLDLLIP
SVMDKGIKFSSETLSMVPGIPIKPMLAKITNGVPQVLKLFQGKALTCEFKYDGQRAQVHK
LADGSIRVFSRNGDDTTSRFPDVISILNELCKPETMTFIIDAEVVAIDRKSGPKLLSFQE
LSSRDRGGKNSVIAVDNIKVDICVFAFDVMLANGEQLLGLPLRQRRKYLKDLFGEEKIGY
FEYSKQITVEADNAYVENEATVTKMNLFFEEAFHSSCEGIMVKSLDVEAGYLPSKRSDSW
LKVKRDYVEGLNDSLDLVPIGAWYGNGRKAGWYSPFLMACYDPDTDEYQSVCRVMSGFSD
AFYIEMKEFFIDDKILGKKDKPVYYQTGEEPDMWFTPEVVWEIRGADFTVSPVHHAAMGL
VHPTRGISVRFPRYVRSRSDKKPSDCSTPADIAEMFHLQTRKMDVRGGN
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcatcctcatcacaccactccaaaaccctaaccctagactccacaaccttattc
ctaaactccccacaaacaaccaccactcctctccctcccatccccaccgacttccccctc
tccaaactcatccccaaaaccaaattcatcatcgacggtttccgcttctccggcgaccac
tccatctcctacttcctcacacacttccactccgatcactacaccggcctcaactccacc
tggaacaaaggcatcatatactgctccccaaccacagctcgccttcttatccaagtcctc
aacgtttcatcttctttcgttgtgtcgttgccgctttccaagccggtttcgatcgatgga
tgtgaggtttcgttgatcgatgcgaatcattgtcctggtgccgttcagtttttgttcaga
gttcccactgaggaggggaattggatgaggtatgtgcataccggtgactttaggtattgc
ggttcgatgaaatcggatcctgtgttgagtgagtttattggcgctgatgctgtgttttta
gatactacttattgtaatccgaaatatgtgtttccgtcgcaagacgagagtattgattat
gttgttaatgtgattaataagtatagtgttgataatgggaatgggaatgggaatgggaat
ggtgtgaagtcggttttgtttcttgttgctacttatgttattgggaaggagaagattttg
cttgagatttcgcgtaggtgtggtaggaagatacaagttgaagaccggaaattggggatt
ctgcgtactctagggtttggggaagatggagtttttactaatgaagagtgtgaaagtgat
gttcatgttattgggtggaatgttttaggggaaacttggccgtattttaaaccgaatttt
gtgaagatgaaggagattatggaggctagaggttactcgaaggtggtgggatttgtacct
acgggttggacgtatgaagtaaagcgtaataagtttgctgtgagggtaaaagattcattt
gagatacatttagtaccttatagtgagcactcgaattacgaagagcttagggagtatgta
aagtttttaagaccaaaacgggttattccaacagttggtgtggatgttgagaatgttgac
gggaagcatgttaacaaaatgctgaagcattttgctggtttggttgacgaaatggccatc
aagcaagacttcttgatgggctttcatcgggggcccaaggaactgaacgggagccttgag
aagaactcgcacaacctaaaggaaaaagtttcggagcccgagaaagaggaacatggttca
cgggattcggtattagtaaccgacaaagaaatggatgaaatgatactggaacttcatgat
tgcttgccagcttgggtcactagggatcaaatgatggatcttataagtaaatcggataaa
aacgttgttgaagcagcctcttattttttcgaacatgaaaccgaatatcatgaacaggtc
attactagtacatctgcttctgcttcacaagaaagctcagttgatatacttaagcacgtc
attgctcatgcttcatccacctgcacacccgttaaaacttttactaaaggctttgcatca
tcttcaactcctattaaaactaaattaaaaaccgagggtagtccttcaagtaaaagaaaa
aaaccatccagcactaaacaatcaagtaagaacaacgcttctcctagccaaaagaggaag
accagtgaaactaagtcaagcaagaagccgatagccacttcacaacttgaaactagtgga
ccgaagcaatgtacaataactaaattcttcaataaggctacacctacggctgaaccgtct
caaaatgatgacaaggtgttaccaagtattgacatcacacattacaaagacgaggtggac
cagtttattcaaatcgtaaatggcagcgagtcattgcgtagctatgctaccactatctta
gaggaaacaaagggtgatattaataaagctctcgacttgtattacaccaactccaaagat
aaacaaagtgaagacactgaagtatctatgaaagataacgttgacaagacctgttccaag
cagtcaaaagagtctttgacacctcaaccgccagctggcaatgttgcttctgatcttgta
tcactaccacctgagaagtattctcccacagaccatgcctgctggaaagagggccagtct
gctccttatctacatctcgccaggacattcagtttgttggaagatgaaaaaggaaagatt
aaagctacatctatgctttgcaatatgtttagaagcttgttaattttgtcgccagaggat
gtactgccagccgtgtacttgtgcacaaacaagattgcacctgaccatgaaaacatggaa
ctaaacattggtggaagtgttgtcacagcagcaatggaagaggcatgtgggacaaacaga
tcaaagattcgggatttgtacaacagcttaggtgatcttggtgatgttgctcaactttgc
cgtcagacacaaaaattacttgcacctccagccccgctttcaattcgaggtgtttattcg
gtgcttcgggagataagtgtgcagacaggtagtggaagtaccatgagaaagagaagcctc
attgttaatctaatgagatcttgtagagagatggagatcaagtttatagtcagaacactg
gttagaaatttaagaatcggggccatgatgagaactgttctgcctgcgttagctcatgca
attgttatgaactcttgccaaggaaaaactatagaaaatctcaaagaaatgcttcagggt
ctctccgcagcagttattgaagcatacaatatcctcccaaatttggatctgctcattcct
tctgttatggataaagggattaaattttcatcggaaacactgtctatggttcctggcata
ccaatcaagccaatgctggcaaaaattactaacggagtccctcaagtgttgaagcttttt
cagggaaaagcacttacctgtgagtttaaatatgatggtcagcgtgcgcaagttcataaa
ttagctgacgggtctatacgtgtgttttcacggaatggggacgacacgacatctagattt
ccagatgtaataagtatattaaatgagctctgcaagcctgagaccatgactttcataatt
gatgccgaggtggttgctatcgatagaaaaagtggtcccaaacttctttcattccaagaa
ctatcttcccgtgatagaggtggcaaaaattcagttattgcagtagataacataaaggtt
gatatatgtgtattcgcttttgatgtcatgcttgctaatggggaacagctgttgggttta
cctttgcgtcaaagaagaaaatatctgaaagatttgtttggtgaagaaaagataggatat
tttgaatattccaagcaaataacagtggaggcggataatgcttacgtggaaaatgaagcc
acagtgactaaaatgaacctgttttttgaagaagctttccattcctcatgtgaaggaatc
atggttaaatctcttgatgttgaagctggttatctcccatcaaagcgttctgattcttgg
ttaaaggtgaagcgagattatgtagaaggtttaaatgattccttggacttggttcctatt
ggtgcttggtacgggaatggaaggaaggctggatggtacagtccatttctcatggcttgc
tatgatcccgacactgatgaatatcaaagtgtctgtcgtgtaatgtccggcttctctgat
gccttctatatagagatgaaagagttcttcatagatgacaagattctaggtaaaaaagat
aaaccagtgtattatcaaacaggtgaggagcctgatatgtggtttacacctgaagtggtg
tgggagatacgaggtgctgatttcactgtttccccggttcaccatgctgcaatgggttta
gtgcatccaacacgtggcatttccgtcagatttcctagatatgttagatctaggtcagat
aagaagccaagtgattgtagtacacctgcagatatagctgaaatgtttcatctgcaaacc
cgaaagatggatgttcgcggtggcaactaa
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