Helianthus annuus (common sunflower): 110937570
Help
Entry
110937570 CDS
T05101
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110937570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110937570
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110937570
Spliceosome [BR:
han03041
]
Complex A
U2 snRNP components
U2 related factors
110937570
Complex B
110937570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
FeoA
Motif
Other DBs
NCBI-GeneID:
110937570
NCBI-ProteinID:
XP_022035699
LinkDB
All DBs
Position
4:complement(188541051..188546348)
Genome browser
AA seq
1102 aa
AA seq
DB search
MEDSKQDSKHKSSKKDDYVKKDEELKRGHRDKERNGDRRRDRERERDRERERERSVDEKH
KEREKHKERHRDKDKEKERDRERKEREREKERERERERERERLKEKENREKEREREKLKE
REREKEREREREKERERRERREREERDREKMREKRREAERDHNGGDVDDGKDRDRKRRRR
EDDYKESSKVSSRRREGSVDISSGKKVDEDSSDKKVSRTREEDMEEEQRKLDDEMEKRRR
RVQEWQEKRRKKEESEREQLGLTSETAGKTWTLDGESDDEEAVPVENADADMDLDGNAKD
VNQDGDVTVNGLDNGDTTHASQNGGDMEEDEIDPLDAFMDTMVIPEVNKLINTAVSGSDH
KSSDLEKDDKNKDNEQQKKKKTGGRSMGRIIPGEDSDEDYPDVENDDDPLEDEDDDEFMK
RVKKTKVEKLSLVDHSKIKYIEFRKNFYIEVKEIKKMTQEEVAAYRKELELKVHGKDVPK
PIKTWYQTGLTTKILETIRKLGYDKPMSIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLP
MLRHIMDQPELGSGDGPIGLIMAPTRELVQQIHSDIRKFTKVMGLRCVPVYGGSGVAQQI
SELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVSYLVMDEADRMFDMGFEPQITRIVQN
TQPNRQTVLFSATFPRQVEVLARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFFRL
LELLGEWYEKGKVLIFVQSQDKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNV
CNLLIATSIAARGLDVKELELVINYDVPNHYEDYVHRVGRTGRAGRKGCAITFLSTDDER
YAPDLVKALELSNQVVPDDLKALADGFMAKVNQGLVQAHGTGYGGSGFKFNEEEDEVRKA
AKKAQAKEYGFEEDKSDSEDDDDGVRKAGGDIAQQAVLAQAAALAAASQQPPTSGVPISL
PGILGMAGVAGGNDGAARAAALAAAMNLQHNLARIQADSLPEHYEAELEINDFPQNARWK
VTHKETLGPIAEWTGAAITTRGQYIQPGRIPGPGEKKLYLFIEGATEQSVKRAKAELKRV
LEDITTQALSLPNAQPGRYSVV
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcaaagcaggattcgaagcataagtctagcaagaaggatgattatgtgaaa
aaagatgaggaattgaagagagggcatcgtgataaggagcgtaacggtgaccgacgtaga
gaccgggagagggagagagatagagagagggaaagagaaaggagtgttgatgagaaacat
aaggagagagagaagcataaagagaggcacagagataaggataaggagaaagagagggat
agggagaggaaggaaagggagagagagaaggaacgggagcgcgaacgtgaacgcgaacgt
gaacggttgaaggagaaagagaacagagagaaggagcgagaacgggagaagttgaaagag
agagaaagggagaaggagagggagagggaaagagagaaggaaagggaaaggagggagaga
agagagagggaagaacgagacagagaaaagatgagggaaaaacgtagagaagctgaacgg
gatcataacggtggtgacgtagatgatggcaaggatagagatagaaaaaggcgtaggagg
gaagatgattacaaggagagtagtaaggtttctagcagacggagggaaggtagtgtggat
atcagttcggggaagaaggttgatgaagattcttccgataagaaagtgtcgaggacccgt
gaagaagatatggaggaagaacaacggaagttggatgatgaaatggaaaaacggaggagg
agagtgcaggaatggcaggaaaaacgaagaaagaaagaggaatctgaaagagaacaactt
ggattaactagtgagactgctggtaaaacatggactttagatggcgagtctgatgatgaa
gaagctgttcctgttgagaatgcagatgctgacatggatttggatggcaatgcgaaggac
gtcaatcaagacggagacgttacggttaatggattagataatggtgatactacccatgct
tcgcagaacggtggtgatatggaagaagatgaaattgatcctttagatgcttttatggac
accatggtgataccagaagttaacaagttaataaacactgcggtttctggttcagatcat
aagagttccgacttagagaaagatgacaagaataaggataacgaacagcagaaaaagaaa
aagaccggtggccgatcaatggggaggattattcccggtgaagattctgatgaagattat
ccagatgttgaaaatgatgatgatcctttagaagatgaagacgacgacgagtttatgaaa
cgagtgaaaaaaaccaaggttgagaaattatcacttgttgatcactcaaagatcaaatac
attgaattccgaaagaatttttacatcgaagtaaaagagataaagaaaatgactcaagaa
gaggttgctgcttacaggaaggaactggaactgaaagtacacggaaaagacgtacccaag
ccaattaaaacgtggtaccagaccggactcacgacgaaaattttagagacaattagaaag
ctcggttacgataaaccaatgtctattcaagcacaggctttgccagtcataatgagtggt
cgagattgtataggcgttgcaaagaccggttctggtaaaaccctagcttttgttttaccg
atgttgaggcatataatggatcaaccagaactcggttctggagatgggcccattgggctt
ataatggcacctacccgagagcttgttcagcagattcacagtgatataagaaagttcact
aaggtaatgggtcttcgctgcgtgccggtgtatggtggttccggtgttgcccaacaaatc
agtgagttgaagcgaggcgcggaaattgttgtttgtacgccaggtaggatgattgatatt
ctatgtacgagtgctgggaaaatcacgaatctgagaagggtttcgtatctggttatggat
gaagctgatcgtatgtttgatatgggttttgagccacaaatcacccgaattgtgcaaaat
acccaacccaatcgccagactgtacttttttctgccacatttcctcgccaggtggaggta
ttggcccggaaagttcttaacaaacccgtggagatacaggtaggcggaagaagcgttgtg
aataaagacatagcccagctagtggaagtgaggcccgaaaacgaaaggttttttagactt
ttagagttacttggagaatggtatgaaaaaggtaaggttttgatatttgttcaatcacag
gacaaatgtgatgctttatttagggatttgcttaaacacggatatccgtgtttatcgctt
catggggctaaagatcagacggatcgagaatcaaccatttctgatttcaagagtaacgta
tgcaatttattgattgcaacaagtattgctgctaggggtttggatgttaaagagcttgaa
cttgtgattaattatgatgtaccaaatcattacgaagactatgttcaccgtgttggccgt
acagggagggcagggagaaaagggtgcgctatcacgtttttgtcgactgacgatgaaaga
tatgcaccggatcttgtaaaagctttagagttgtcgaatcaagttgttcccgatgatttg
aaagctcttgctgatgggtttatggcgaaggttaatcagggacttgtgcaagctcatggt
accggttacggtggaagcggttttaagttcaatgaagaagaagatgaagtcagaaaagca
gcgaagaaagcacaggccaaagaatatggatttgaagaagataaatcggattcagaagat
gatgatgacggggtgcgaaaagcaggtggtgatattgctcagcaggctgttcttgctcaa
gctgccgctcttgctgccgccagtcaacagcctcctactagtggggtacctatatctctg
ccaggtattctcggtatggcgggtgttgctggcggcaatgatggtgctgctagggctgca
gcactggctgctgccatgaacttgcagcacaatctggctcggattcaagctgattctttg
ccggaacattatgaagctgagttggagattaacgatttcccgcaaaacgctaggtggaag
gtgacacataaagaaaccctcggaccaattgctgagtggactggggctgctattaccact
aggggtcagtatattcaacccggcaggatcccgggacccggcgagaaaaaactatatttg
ttcattgaaggtgctaccgaacaatctgttaaacgggccaaagccgaattgaaacgtgtt
ctagaagacatcacaacacaggcattatctcttccaaacgcacagccagggcgttactct
gttgtatga
DBGET
integrated database retrieval system
