Helianthus annuus (common sunflower): 110943025
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Entry
110943025 CDS
T05101
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
han00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110943025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110943025
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
110943025
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
F-box-like
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
110943025
NCBI-ProteinID:
XP_022040476
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Position
1:complement(4836622..4841183)
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AA seq
580 aa
AA seq
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MAISFPEEVLEHVFSFITSHTDRNVVSLVCKSWYEIERWCRRRIFIGNCYAVSPAMMIRR
FPEVRSVELKGKPHFADFNLVPDGWGGYFYPWICEMARAYPLLEEIKLKRMVVTDECLEL
ISKSFKNFKVLVLSSCEGFSTDGLAAIAANCRNLRELDLRESEVEDLSGHWLSHFPDSCT
SLQSLNMSCLASEVSFSALQRLIARSPNLKTLRLNRAVPLEKLSTLLHRAPQLVELGTGA
YSAEIRPDVYSNLAEAFSRCKELMGLSGFWDVVPSYLPAIYSVCSRLTSLNLSYATIQSP
DVTKIVTQCPNLQSLSVLDYIEDAGLNALSLSCKDLRELRVFPSDPFVADANVSLTEQGL
VAVSEGCLKLQSVLYFCRQMSNAALTTIAKNRPNLNCFRLCILEPRAPDYLTLEPLDNGF
GAIVDHCKQLQRLSLSGLLTDRVFEYIGKHAKKLEMLSIAFAGDSDMGLHHVLSGCDSLR
KLEIRDCPFGDKALLDNVSKLETMRSLWMSSCSVSLGACKRLSQKMPRLNVEVIDEQGDV
DSRSDNSPVEKLYVYRTVAGPRFDMPSFIRNMDQNPTCRR
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcgatatcgttcccggaagaggtgttggagcatgtattctcgttcataacgtcgcat
acagaccggaatgttgtatcgttggtgtgtaagtcgtggtatgagatagaacggtggtgt
cggaggaggattttcattggaaattgttacgcggtgagtccggcgatgatgattaggagg
tttccggaggtgagatctgtggagttgaaagggaaaccgcattttgcggactttaatttg
gtgccggatggttggggagggtatttttatccttggatctgtgaaatggctagggcttat
ccgttgttagaggagattaagctgaaaagaatggtggttacggatgagtgcttggagttg
atttcgaagtcgtttaagaactttaaggtgttggtgttgtcttcttgtgagggtttcagt
accgatgggcttgctgccattgccgccaattgcaggaatttgagagaactggatttgagg
gagagtgaagtggaagacctgagtgggcattggctaagtcatttccctgattcttgcacc
tcattgcagtccttaaacatgtcttgtttggcttccgaggtgagtttttcagcgctccaa
cgcctcatcgctcgctcacccaacctaaagactcttcgactcaatcgcgctgttcccctt
gaaaaactctccaccctacttcaccgggccccacagcttgttgaactgggcacaggtgcc
tattctgctgaaattcgacccgatgtgtactcaaatctagcagaggctttctctagatgc
aaggaacttatgggtctttctggattttgggatgttgttccttcttatcttccagctatt
tattctgtttgttctagactcacctcgttaaacttgagttatgccactattcaaagccca
gatgttaccaaaatcgtcactcaatgtcctaatctgcagagtttatcggtgctggattac
attgaagacgccgggctcaacgcgctttcgttatcctgtaaggacttgcgagaacttcga
gtttttccgtctgacccgttcgtagcagatgcaaacgtatcattaacagaacaaggtcta
gttgcggtttccgaagggtgcttgaagctccaatcggttctttacttttgtagacagatg
tcaaacgctgcattgaccaccatcgctaaaaaccgtcctaacctaaactgtttccgtctc
tgcattctcgaaccacgagcccctgattacctaaccctcgaaccactcgacaacggtttc
ggagcgatagtggaccactgtaagcaacttcaacgtctctcgttatccggtctgttaaca
gaccgtgtgtttgagtacatcgggaaacacgctaagaagttggaaatgctttcgatagcg
tttgctggtgatagtgatatgggtttgcatcatgtgttatcggggtgtgacagcttacgg
aagcttgagattagagattgcccgttcggggacaaggctttgttggataatgtttccaaa
ttggagacaatgcgatccctttggatgtcttcgtgttcggttagtctcggtgcttgtaag
cggctgagtcagaagatgcctaggcttaacgttgaagttatcgatgagcagggagacgta
gattccagatctgataattctcctgttgagaagctttatgtataccgcacggttgctggg
cctcggtttgacatgcctagctttatacggaatatggatcaaaaccctacatgtaggagg
tag
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