Halothece sp. PCC 7418: PCC7418_0181
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Entry
PCC7418_0181 CDS
T02379
Name
(GenBank) Phycobilisome linker polypeptide
KO
K02096
phycobilisome core-membrane linker protein
Organism
hao
Halothece sp. PCC 7418
Pathway
hao00196
Photosynthesis - antenna proteins
hao01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hao00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
PCC7418_0181
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
hao00194
]
PCC7418_0181
Photosynthesis proteins [BR:
hao00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Allophycocyanin (AP)
PCC7418_0181
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBS_linker_poly
Phycobilisome
Motif
Other DBs
NCBI-ProteinID:
AFZ42419
UniProt:
K9Y6I2
LinkDB
All DBs
Position
complement(209190..212450)
Genome browser
AA seq
1086 aa
AA seq
DB search
MISASGGSSVARPQLYQTVPLSKLSQAEQQDRFLEQGELKELDTFFQLGTQRVEIAQVIT
RNSELIVSRAANRIFTGGSPMAYLEKPREEAPVMVPAGGEESEDVSRQMQLGTVSYIESS
GGGFLEGLRSLFTVSGSSVPVPPGFRPINVSRYGPQNMQKSLRDLSWMLRYVTYAIVAGD
PNIITVNVRGLREVIENACSSDATVVALGEMQAAALGYFKQDEAARETVEQYFQVLISEF
KAPTPSNKLRQRPSGDQQGLELPQSYFNAAENRQKYAMKPGLSSFEKQAVVKAAYRQVFE
RDITRAYSLAISDLESKVKNSEISMKEFIRRLGKSPLYRKQFYEPFINSRALELAFRHFL
GRGPSSREEVQTYFSIVSEGGLPALIDALVDSKEYSDYFGEETVPYIRGLGQEAQECRNW
GMQQDLFNYSAPFRKIPQFITTYAQYNRPLADQHPYGSGNDPLEIQFGAIFPKETRNPSK
SPAPFSKDTRRILINRGPATYNQTGNPKARGLFPGSLGPKVFRYDQGAFSGLTDKTNNSY
GVKYSESSTQKLILACYRQVFGRDVYDGQRMKTAEIKLENGELTVREFVRMLAKSELFRK
LYWTSLYVTKSIEYIHRRLLGRPTYGRQEMNKYFDICSKKGFYALVDAIIDTTEYSETFG
EDTVPYERYLTPAGLQLRTRTNNLRQDVGTEIKPEETPRYQELGQVASDRSEPDVQYRIQ
QGVNKRREQTKQFKLTNLQDKVALETVISAAYRQVFERDIEPYVVKAEFTNLESKLGNGE
ITVKEFIEGLGCSDLYIKEFYTPYPNTKVIELGTKHFLGRAPLNQKEIQKYNQLLATQGI
RAFVKALVNSMEYVQEFGEDVVPYRRYPTLPAANFPNTESLYNKLTKQDDELVVPSFEPT
RAKMDNSKLPLASQANGQNGAGQVTNYLELARSMNTLEAAQETATVARIFRHSPQASAAK
TQSVINGIYAQILDVPYDNVPEDFRLEAWEATLLAGNCTVREFVKALATSDVYQERFVSP
YPDPKVVECLYRHLLGRSASGIEVHQMTTLFAEQGLSAVVDYLVDGAEYNRFFGDMVVPY
AKENNR
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgattagtgcctccggtggaagttcagtcgcacgtcctcagctttatcaaaccgttccc
ctttctaagttatcccaagcggaacaacaagaccgctttttggaacaaggggagttaaaa
gaacttgatactttcttccagttgggaacacaacgggtggaaattgctcaagtgattact
cggaattccgagttgattgtttctcgcgctgcgaaccgcatttttacagggggttccccg
atggcttatctggagaaacccagagaagaagccccagtaatggttccagcaggtggcgaa
gaaagcgaggatgtcagtcgtcagatgcaactgggaacggttagctatattgaaagcagt
ggcggtggtttcttagaagggctgcgatcgctgtttacagtttcgggtagcagtgttcct
gttccgccaggattccgtcccattaacgtttctcgttatggtccccaaaatatgcagaaa
tctttgcgggacttatcttggatgttgcggtatgtcacttacgcgatcgttgctggtgat
cctaatattattaccgttaacgttcgcggtttgcgggaagtcatcgaaaatgcttgctct
agcgatgcgactgtggttgctttgggagaaatgcaagcagcagctttaggttacttcaag
caagatgaagcagcccgggaaacggttgagcaatacttccaagttctgatctcagaattt
aaagcaccaaccccctccaataaactgcgtcagcgccccagtggagaccaacaagggtta
gaactgcctcaaagctacttcaatgctgcggaaaatcgccaaaaatacgcgatgaaacct
ggactctctagctttgaaaaacaagcggtggtcaaggctgcatatcgccaagtctttgaa
cgggatatcactcgtgcttatagcctagcgatttctgatttagaatccaaggttaaaaat
tctgaaatttcgatgaaagagtttatccgccgtctgggtaaatctcccctttatcgcaaa
cagttttatgaaccctttatcaatagtcgtgctttagaacttgcgttccgtcacttcctc
ggacgcggtccctcttctcgcgaagaagtccaaacctacttctccattgtctctgaaggt
ggtttaccagcactgattgatgctttagttgatagcaaagaatattccgattactttggg
gaagaaactgttccttatattcgcggtttaggacaagaagcgcaagaatgtcgcaactgg
ggaatgcagcaagacctgtttaactacagtgcacccttccgcaaaattcctcaattcatc
accacttacgcccaatataatcgtcctctggcggatcaacacccctatggtagcgggaat
gatcctctcgaaattcaatttggcgcgattttcccgaaagaaacccgcaaccccagcaag
agtccagcgccattcagcaaagatacccgtcggattttaattaatcgcggaccagccact
tataaccaaacgggtaatcccaaagctcgcggtttattccctggatctctgggtccgaaa
gtcttccgctatgaccaaggtgcattttctggcttaacggataaaaccaacaacagctat
ggcgttaaatattctgaaagcagcacgcagaaactcatcctcgcttgttatcgccaagtc
tttggtcgcgatgtctatgacggacaacgcatgaagactgctgaaatcaagctggaaaat
ggggaattgacggtgcgcgagtttgtgcggatgttggcaaaatcggaactcttccgcaaa
ctctactggacttccctttatgttacgaagtccattgaatacatccatcgtcggctttta
ggtcgtcccacttatggtcgtcaagaaatgaataaatactttgatatttgttccaagaaa
gggttctacgccttagtggatgcgattattgacaccacagagtacagtgaaacctttggg
gaagataccgttccctatgagcggtatttaacgcctgctggcttgcaactgcggactcgg
acgaataacctccgtcaagatgtgggtacggaaatcaaacctgaagaaactcctcgttat
caagagttgggtcaagtggcttcagatcgcagtgaacctgatgtgcagtatcgcattcag
caaggggtgaataaacggcgtgagcaaaccaagcaatttaagctcacaaacctccaagat
aaagttgcgctagaaactgtgatcagtgctgcgtatcgtcaagtctttgaacgggatatt
gaaccttatgttgttaaagcagagttcaccaatctcgaaagtaagctcggtaacggcgaa
attactgtgaaagagtttattgaaggactcggttgctctgatttatatatcaaagagttc
tacacgccttatcctaatacgaaggtgattgagttgggaacaaagcatttcttagggcgt
gcgcctttgaatcagaaagagattcagaaatataaccaactgttggcaacacaagggatt
cgcgcttttgtgaaggctttggttaacagcatggagtatgtgcaagagtttggtgaagat
gtggttccctatcgtcgctatcccaccttacccgcagccaacttccccaatacggaaagc
ctgtataacaagctgacaaaacaggatgatgagttggttgttcctagctttgaacccact
cgcgccaaaatggataacagcaagttacctttagcgagtcaggcgaacggacagaatggt
gcgggacaagtcactaactatttagagttagcgcgatcgatgaatacgctagaagctgct
caagaaacggcaactgtggcgcgtattttccgccattctccccaagccagtgcagcgaaa
actcaatcggtcattaatgggatttatgctcaaattctggatgttccttatgataatgtt
cctgaggacttccgtttagaagcatgggaagcaaccctgctcgctggcaattgcactgtg
cgggagtttgtgaaagcactagcaacatctgatgtttatcaagaacgttttgtttctcct
tatcctgatccgaaggtcgttgagtgtctctatcgccatctattgggacggagtgcaagc
ggaattgaagttcatcagatgacaactctcttcgctgaacaaggtttaagtgcagtggtt
gattatctggttgatggtgcagaatacaaccgtttctttggagacatggttgttccttat
gcgaaggaaaataaccgctaa
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