Haloplanus rubicundus CBA1112: DU484_03005
Help
Entry
DU484_03005 CDS
T05557
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
haq
Haloplanus rubicundus CBA1112
Pathway
haq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DU484_03005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haq03400
]
DU484_03005
DNA repair and recombination proteins [BR:
haq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DU484_03005
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DU484_03005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_22
DUF87
HEM4
DUF4407
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AXG08913
UniProt:
A0A345E9P1
LinkDB
All DBs
Position
418011..420071
Genome browser
AA seq
686 aa
AA seq
DB search
MSDTNSGPLQPDRPDADRPFRVDAPFDPAGDQPDAIEELVAGYEAGMDEQTLLGVTGSGK
TNTVSWVIEELQQPTLVIAHNKTLAAQLYEEFRNLFPDNAVEYFVSYYDYYQPEAYVEQT
DTFIDKDASINDEIDRLRHSATRSLLTRNDVIVVASVSAIYGLGDPANYVDMAMRLETGQ
EIDRDDLLARLVDLNYDRNDVDFTQGTFRVRGDTVEVFPMYGRYAVRVEFWGDEIDRLTK
LDPLEGEVKSQEPAALIHPAEHYSIPEERLENAIDEIEELMQDRVAYFERQGNLVAAQRI
EERTTFDIEMLRETGYCSGIENYSVHLSDRASGESPYTLLDYFPDTFLTVVDESHQTLPQ
IKGQYEGDKSRKDSLVENGFRLPTAYDNRPLTFAEFEEKTDRALYVSATPGDYEQEHSEQ
VVEQIVRPTYLVDPAVEVASATGQVEDLMDRIDDRIERDERVLVTTLTKRMAEDLTEYLS
EAGVAVEYMHDETDTLERHELIRGLRLGDFDVLVGINLLREGLDIPEVSLVAILDADQEG
FLRSETTLVQTMGRAARNVNGEVVLYADEVTDSMRSAIDETQRRRRIQQEFNAEHGHEPT
TIQKEVGETNLPGSETDTSGVTGDAPESEEEARARIEALEERMAAAADNLEFELAADIRD
RIRELREDWAFDDADDGIAPEFDAEF
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacacgaactccgggccgctccagccggaccggcccgacgccgaccggcccttc
cgggtcgacgcgcccttcgatcccgcgggcgaccagcccgacgccatcgaggaactcgtc
gccggctacgaggccgggatggacgagcagaccctcctcggcgtgacggggtcgggcaag
accaacaccgtctcgtgggtgatcgaggagctccagcagccgacgctcgtcatcgcccac
aacaagacgctggccgcccagctgtacgaggagttccgaaatctgttcccggacaacgcc
gtcgaatacttcgtctcctactacgactactaccagcccgaggcgtacgtcgagcagacg
gacacgttcatcgacaaggacgcctcgatcaacgacgaaatcgaccgcctgcgccactcc
gcgacccggtcgctactcactcgcaacgacgtcatcgtcgtcgcgagcgtgtcggccatc
tacgggctgggcgaccccgcgaactacgtcgacatggccatgcgcctcgagacgggtcag
gagatcgaccgcgacgacctgctggcccggctcgtcgacctgaactacgaccgcaacgac
gtggacttcacgcagggcaccttccgggtgcgcggcgacaccgtcgaggtgttcccgatg
tacggccgctacgccgtccgcgtggagttttggggcgacgaaatcgaccgcctgacgaag
ctcgatccgctggaaggcgaggtgaagagtcaggagccggcggccctgatccacccggcc
gaacactactccattccggaggaacggctcgaaaacgccatcgacgaaatcgaggagctg
atgcaggatcgggtggcctacttcgagcggcaagggaatctggtcgccgcccagcgcatc
gaggagcgcaccaccttcgacatcgagatgctgcgcgagacgggctactgctcgggcatc
gagaactactccgtccacctctcggaccgggcgtccggcgagtcgccctacaccctgctg
gattacttccccgataccttcctcacggtcgtcgacgagtcccaccagaccctcccgcag
atcaagggccagtacgagggcgacaagtcgcgcaaggactcgctggtcgagaacggcttc
cggctcccgaccgcctacgacaatcgcccgctcaccttcgcggagttcgaggagaagacg
gatcgggcgctctacgtctcggcgacgccgggggactacgagcaggaacactccgagcag
gtggtcgaacagatcgttcgccccacgtatctggtcgaccccgccgtcgaggtggcatcg
gcgacggggcaggtcgaggacctgatggatcggatcgacgaccggatcgagcgggacgag
cgcgtcctcgtcacgacgctcaccaagcgcatggccgaggacctgacggagtacctctcg
gaggcgggcgtcgcggtggagtacatgcacgacgagacggacacgctggagcgccacgaa
ctgatcaggggcctgcgcctcggcgacttcgacgtgctcgtcggcatcaacctcctccgg
gagggactggacatccccgaggtgtcgctggtcgccatcctcgacgccgaccaggagggc
tttctccgctcggagacgacgctcgtccagacgatgggccgggccgcccgcaacgtcaac
ggcgaggtggtgctctacgccgacgaggtgacggattcgatgcggtcggccatcgacgag
acccagcgccgtcgccgcatccagcaggagttcaacgcggaacacgggcacgaaccgacg
accatccagaaggaggtgggtgagacgaacctgccggggagcgagacggacacctcgggc
gtcaccggcgacgcacccgagagcgaggaggaggcccgcgcccgcatcgaggcgctcgaa
gagcggatggcggccgccgccgacaacctggagttcgaactcgcggcggacatccgtgac
cggatccgcgaactccgcgaggactgggcgttcgacgacgccgacgacggcatcgccccg
gagttcgacgcggagttctga
DBGET
integrated database retrieval system
