Halococcoides cellulosivorans: HARCEL1_06610
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Entry
HARCEL1_06610 CDS
T05406
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
harc
Halococcoides cellulosivorans
Pathway
harc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HARCEL1_06610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
harc03400
]
HARCEL1_06610
DNA repair and recombination proteins [BR:
harc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HARCEL1_06610
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HARCEL1_06610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_19
AAA_22
DUF87
AAA_30
UB2H
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AWB27396
UniProt:
A0A2R4X0T9
LinkDB
All DBs
Position
1333686..1335740
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AA seq
684 aa
AA seq
DB search
MSDSRSGPLTVDRPDAESAFRVDAPFDPAGDQPDAIDELVAGYEAGHDEQTLLGVTGSGK
TNTVSWVIEQLQQPTLVIAHNKTLAAQLYEEFRTLFPDNAVEYFVSYYDYYQPEAYVEQS
DTHIEKDASINDEIDRLRHSATRSLLTREDVIVVASVSAIYGLGDPSQYTDMALRLERGQ
QIGREEVIARLVDLNYERNDVDFTQGTIRVRGDTIEVYPMYGRYPVRIEFWGDEIDRLCK
LDPMEGEVVSEEPAVMVHPAEHYSIPDEHLQRAIEEIEQLRDDRVAHFERQGNLVAAQRI
DERTTFDLEMLAETGYCSGIENYSVHLSDRDSGDAPYTLLDYFPDDFLTVIDESHRTVPQ
IRGQYAGDRSRKESLIENGFRLPTAYDNRPLTFDEFEERTDRTLYVSATPGEYEREQSGQ
IVEQIVRPTYLVDPDIEVAPAEGQIEDLLDRIAAMPEDERVLVTTLTKRMAEDLTEYLDE
AGVDAAYMHDETDTLERHELIRSLRLGEIQVLVGINLLREGLDIPEVSLVAILDADQEGF
LRSETTLVQTLGRAARNREGRAVLYADDSSDAMEAAISETERRREIQREFNRTHDVEPQT
IEKPVGETNLPGSETDTSEAAGVDPEDSEAAAELIDQLEQRMDEAAGNLEFELAADIRDR
IRTLQQEFDLGADDVGVPPETGEF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacagtcgatccggaccgctaacggtagaccgcccggacgccgagtcggcgttc
cgggtcgacgcgccgttcgaccccgccggcgatcagccagacgcgatcgacgagttggtc
gcgggctacgaggccggacacgacgaacagacgctgctgggcgtgacgggatcgggcaag
accaacaccgtctcgtgggtgatcgaacagctgcaacagccgacgctggtgatcgcccac
aacaagacgctggccgctcaactgtacgaggagtttcgaacgctgtttccggacaacgcc
gtcgagtatttcgtcagctactacgactactatcagcccgaggcgtacgtcgagcaaagc
gacacccacatcgagaaagacgcctcgatcaacgacgaaatcgatcgcttgcgccactcc
gcgacgcgatcgctgctgactcgcgaggacgtcatcgtcgtcgcctcggtgtcggccatc
tatgggctgggtgacccttcccagtacaccgacatggcactccgcctggagcggggccaa
cagattggtcgcgaggaggtcatcgcccgactggtcgatctgaactacgagcgcaacgac
gtcgacttcacccaggggacgatccgcgtgcggggcgacaccatcgaagtctacccgatg
tacggccggtatcccgtgcgcatcgagttctggggcgacgagatcgatcgactgtgcaaa
ctcgatccgatggaaggcgaggttgtgagcgaagagccggccgtcatggtccaccccgcc
gaacactactcgatccccgacgagcacctccagcgcgccatcgaagagatcgaacagttg
cgcgacgaccgtgtcgcgcacttcgagcgccagggcaatctcgtcgccgcccagcgcatc
gacgagcgcacgaccttcgacctggagatgctcgcggagacgggctactgttcgggcatc
gagaactactcggtccacctctcggatcgcgattcgggcgatgccccgtacacgctcctg
gattacttccccgacgactttctgacggtgatcgacgagtcccaccgaacggtcccccag
attcgcgggcagtacgcaggcgaccgctcgcggaaggaatcgctgatcgagaacggattc
agactgccgaccgcctacgacaaccggccgctgaccttcgacgagttcgaggagcgcacc
gatcggacgctgtacgtctccgcgacgcccggcgagtatgagcgcgagcagagcggccag
atcgtcgaacagatcgtcaggccgacttacctcgtcgatcccgacatcgaggtcgcgccc
gccgaaggccagatcgaagacctcctcgaccggatcgccgcgatgcccgaggacgagcgc
gtgctcgtgacgacactcaccaagcgcatggccgaggacctcaccgagtatctcgacgag
gcgggcgtcgacgccgcgtacatgcacgacgagaccgacacgctcgaacgccacgaactg
atccgctcgctccgcctgggcgagatccaggtgctcgtcgggatcaacctcttacgagag
ggcctggacatccccgaggtgtcgctggtcgcgatcctcgacgccgaccaggaaggattt
ttgcggagtgagaccacgctcgtccagacgctggggcgggccgcgcgcaaccgcgagggg
cgggctgtcctctacgccgacgactctagcgacgcgatggaggccgcgatctcggagacc
gagcgccgtcgcgagatccaacgcgagttcaatcgaacccacgacgtcgagccgcagact
atcgagaagcccgtcggcgagacgaacctccccggcagcgagactgacacctcggaggcg
gcaggcgtcgatcccgaggacagcgaggccgccgccgaactgatcgaccagctcgaacag
cgcatggacgaggccgcaggcaacctggagttcgaactcgcggcggacatccgcgatcga
atccgaacgctccagcaggagttcgacctcggggcggacgacgtcggcgtcccgcccgag
acgggcgaattttaa
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