Halococcoides cellulosivorans: HARCEL1_10365
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Entry
HARCEL1_10365 CDS
T05406
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
harc
Halococcoides cellulosivorans
Brite
KEGG Orthology (KO) [BR:
harc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
harc03016
]
HARCEL1_10365 (endA)
Enzymes [BR:
harc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HARCEL1_10365 (endA)
Transfer RNA biogenesis [BR:
harc03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
HARCEL1_10365 (endA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
AWB28080
UniProt:
A0A2R4X2Q7
LinkDB
All DBs
Position
complement(2074426..2075433)
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AA seq
335 aa
AA seq
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MNLRFADGLVRGGREARERFHDTRAYGRSDDGSLVLAPVEAAHLLARGDVDRIDGLGVRD
LLATERVSLAEFAVYADLRDRGFYLTPGRLLDERAAFVVYPRGSGPWDDAVAYRIDVVGE
RETVAPTPGVLAVVDEDGEVSYIECTTRDPAGSVDRVETSLAGRLVEDRVLVAEPPAGVY
DPSFYGQPLPGGLDGIGLSILEATHLAATDRLALAEHADPDARLRAVGRDLEGDRFERRL
AAYRALRSAGIAPKTGYKFGADFRSYASIESVDNLGHSEWLVRVRPADRPVAPRDLALDV
RMAHGVRKTMVYALVDPETPRPDSVEWLAIERLTP
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcggttcgcggacggtctcgtccggggtggtcgcgaggctcgcgagcgattt
cacgacacgcgcgcgtacggccgctccgacgacgggagtctcgtgctcgcgccggtcgag
gccgctcacctgctcgcccgcggtgacgtcgatcggatcgacgggctcggggtgcgggac
ctgttggccaccgagcgggtctcactcgcggagtttgcggtgtacgccgacctgcgcgac
cggggcttctatctcacgccgggccgactcctcgacgagcgcgcggcgttcgtggtctac
ccccgtggatcgggcccctgggacgacgcggtcgcctaccggatcgacgtggtcggggag
cgcgagaccgtcgcccccacaccgggcgtgctcgccgtcgtcgacgaggacggcgaggtc
tcctatatcgagtgcacgacgcgcgaccccgcgggatcggtcgatcgcgtcgagacgtcg
ctcgcgggccgtctcgtcgaggatcgcgtcctcgtggctgagccgccagcgggcgtctac
gacccatccttttacggccagcccctgccgggtgggctcgacggcatcggcctctcgatc
ctcgaagcgacgcatctcgcggcgaccgatcgactggcgctggccgagcacgcggacccc
gacgctcgtctccgcgcggtcgggcgcgacctggagggcgaccgcttcgagcgccgtctc
gcggcgtatcgcgcgcttcgatcggcggggatcgcccccaaaacaggatacaaattcggc
gcggacttccggagctatgcgtcgatcgagtccgtcgataatctgggccactcggagtgg
ctggtgcgggtgcggcccgccgaccgcccggtcgcgccgcgggatctggcgctcgacgtc
cggatggcccacggcgtccggaagacgatggtgtacgcgctcgtcgatccggagacgccg
cgtccggacagcgtcgagtggctcgcgatcgagcggctcacaccctga
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