Halorhabdus sp. SVX81: SVXHr_0456
Help
Entry
SVXHr_0456 CDS
T09281
Symbol
gtpBP1
Name
(GenBank) GTPase
KO
K03231
elongation factor 1-alpha
Organism
hasv
Halorhabdus sp. SVX81
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasv03019
]
SVXHr_0456 (gtpBP1)
03016 Transfer RNA biogenesis [BR:
hasv03016
]
SVXHr_0456 (gtpBP1)
03012 Translation factors [BR:
hasv03012
]
SVXHr_0456 (gtpBP1)
04131 Membrane trafficking [BR:
hasv04131
]
SVXHr_0456 (gtpBP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hasv04147
]
SVXHr_0456 (gtpBP1)
Messenger RNA biogenesis [BR:
hasv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
SVXHr_0456 (gtpBP1)
Transfer RNA biogenesis [BR:
hasv03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
SVXHr_0456 (gtpBP1)
Translation factors [BR:
hasv03012
]
Eukaryotic type
Elongation factors
SVXHr_0456 (gtpBP1)
Membrane trafficking [BR:
hasv04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
SVXHr_0456 (gtpBP1)
Exosome [BR:
hasv04147
]
Exosomal proteins
Proteins found in most exosomes
SVXHr_0456 (gtpBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP_EFTU_D3
MeaB
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
WEL16637
LinkDB
All DBs
Position
466846..468483
Genome browser
AA seq
545 aa
AA seq
DB search
MTPDRAVLERAIERGEHEGGSVEFKERLTRDTHLVDGRLESLAAQLRHRVLSGDGEATYV
VGITDDGNLAGIDPEAFSESMDVLSLLADEAGAHIEDVETWGVDGEGNAVRGQSGERGIA
GVATIREGAVMDDDEHIVVGTAGHVDHGKSTLVGSLVTGQADDGQGGTRSYMDVRPHEVE
RGLSADLSYGVYGFDDDGPVRMDNPDRKTDRARIVEEADRLVSFVDTVGHEPWLRTTIRG
LVGQKLDYGLLTVAADDGPTKTTREHLGILLATELPTIVAITKADLVDADRIATVEREVE
RLLRDVEKTPLPVERHGVDAAIEEISETVVPVVTTSAVTGDGLDTLDELFERLPKTGGDE
TAEFRMYVDRSYNVTGVGAVASGTINAGRVEAGDELLLGPMADGTFREVEARSIEMHYHR
VDEGRAGRIVGIALKGVEEQDVERGMVLLPREADPQPVREFEAEVMVLNHPTRIGEGYEP
VVHLETISEAAAFYPEGGQLLPGDSGRARVRFKFRPYLVEEGQRFVFREGRSKGVGTVTD
VTGVE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgactcccgaccgggccgtcctcgaacgcgcgatcgagcgcggcgagcacgagggcggc
agcgtcgagttcaaggaacgcctgactcgcgatacgcacctcgtcgacggtcgcctcgaa
agtctggccgcccagcttcgccaccgcgtcctcagcggcgatggcgaagcgacctacgtt
gtggggatcaccgacgacgggaacctggctggtatcgaccccgaggcgttctccgaatcg
atggacgtcctctcgctgctcgccgacgaagccggggcgcacatcgaggacgtcgagacc
tggggggtcgacggggagggcaatgccgtccgtggccagtccggcgagcgcgggatcgcc
ggtgtggcgacgatccgggagggcgcggtcatggacgacgacgagcacatcgttgtcggg
accgccggccacgtcgaccacggcaagagcaccctcgtcggctcgctcgtaacgggccag
gccgacgacggccagggcgggacgcgctcgtacatggatgttcgcccccacgaggtcgag
cgcggcctctccgccgatctttcgtatggcgtctacggcttcgacgacgacggccccgtc
cggatggacaaccccgaccggaagaccgaccgcgcacggatcgtcgaggaggccgaccgc
ctcgtgagcttcgtcgatacggtcggccacgagccctggctccggaccacgatccgcggg
ctcgtcggccagaagctcgattacggcctgttgacggttgctgccgacgatgggcccacc
aagacgacccgcgaacacctgggcatcctgctggcgaccgaactgccgacgatcgtcgcc
atcacgaaggccgatctcgtcgacgccgaccggatcgccacagtcgagcgtgaggtcgag
cgcctgctgcgggacgtcgagaagacaccgctgccggtcgagcgccacggcgtcgacgcc
gcgatcgaggagatctcagagaccgtcgtccccgtggtgacgaccagcgccgtcacgggc
gatggactcgacaccttagacgaactcttcgagcgactccccaagaccggtggcgacgag
acggccgagttccggatgtacgtcgaccggagctacaacgtcaccggcgtcggcgcggtc
gcctcggggacgatcaacgccggccgcgtcgaggccggcgacgaactcctgctgggcccg
atggccgacggcaccttccgcgaggtcgaggcccgatccatcgagatgcactaccaccgc
gtcgacgagggccgtgccggtcggatcgtcggtatcgcgctgaaaggcgtcgaagaacag
gacgtcgaacgcgggatggtcctcctgccccgcgaggccgatccccaaccggtccgggag
ttcgaggccgaggtgatggtgctcaaccacccgacgcggatcggcgagggctacgaaccc
gtggtgcacttagagaccatcagcgaggccgccgcgttctatcccgagggcggccagcta
cttccgggcgacagcgggcgggcgcgcgttcgattcaagttccgcccgtatctggtcgag
gaaggccagcgcttcgtcttccgggaggggcgttcgaagggcgtcgggacagtgaccgac
gtgactggcgtggagtaa
DBGET
integrated database retrieval system