Hafnia alvei: AT03_14165
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Entry
AT03_14165 CDS
T03425
Name
(GenBank) hypothetical protein
KO
K19789
DNA repair protein RadD
Organism
hav
Hafnia alvei
Brite
KEGG Orthology (KO) [BR:
hav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hav03400
]
AT03_14165
DNA repair and recombination proteins [BR:
hav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
AT03_14165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
zinc_ribbon_2
AAA_30
zf-tcix
DZR
AAA_22
AAA_16
SLFN-g3_helicase
AAA
UPF0547
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AIU73422
UniProt:
A0A097R3W4
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All DBs
Position
3035623..3037383
Genome browser
AA seq
586 aa
AA seq
DB search
MAFTLRPYQREAVEATIAHFRKHQEPAVIVLPTGAGKSLVIAELAKIARGRVLVLAHVKE
LVAQNHSKYCAYGLEADIFSAGLQQKESRGKVVFGSVQSVARNLPLFDGEFSLLIVDECH
RISESDDSQYQQILQHLRNNNPKLRLLGLTATPYRLGKGWIYQYHYHGITRGDSNSLFRD
CIYELPLRYMIKNKFLVPPERLDMPVVQYDFSRLEPSSNGLFREVDLNRELKDQQRITPH
IVSQIMEFAATRKGVMIFASTVEHAREIHGLLPPEQAALVSAETPGDERDAIINAFKRQE
LLYLVNVAVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLSPGKTDCLILDYAGNP
HDLFTPEVGTTKPHSDSQPVQVFCPGCGFANTFWGKTTENGDIIEHYGRRCQGWLEDDEG
GREQCDYRFRFKTCPHCGAENDIAARRCHQCNQVLVDPDDMLKEALKLKDALVLRCGGMQ
LQHGEDDKGEWLSITYYDEDGADVSERFRLNTPAQRTAFMQLFLRPHLRAPGIELVWRKA
ADIVAQQDKLRYPDFVVARMKGRFWQIRQKVFDYQGRYRKADSLSG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcctttactcttcgtccttatcagcgtgaggcggtggaagccaccatcgcgcatttt
agaaaacaccaagaacctgcggttattgtcttgcctaccggagcgggaaaaagcttggtg
attgctgagttggcgaaaattgcgcgtggccgcgttctagtgttagcccacgtgaaagag
ctggtggcgcaaaaccacagtaaatattgtgcctatggtttagaggccgatattttttca
gccggtttacagcaaaaagagagccgcggaaaagtggtgtttggcagcgtgcagtcggtg
gcgcgcaatcttccgctgtttgacggcgaattttcgctgctgatcgtagatgaatgccac
cgcatcagcgaaagcgatgacagccagtatcagcaaatccttcagcatttacgtaataat
aatccgaagctgcgcttattagggctcacggcaaccccctatcgtctgggcaaaggctgg
atttatcagtaccactatcacggcatcacgcgcggcgatagcaacagcctatttcgtgac
tgtatttacgaattgccgctgcgctatatgattaaaaacaaatttttggtcccgccggaa
cggttagacatgccagtggtgcaatacgatttcagccgattagaaccgagcagcaatggg
ctatttcgcgaagtcgatctcaaccgcgaattaaaagatcaacagcgcataacgccgcat
attgtcagccaaatcatggaatttgccgccacgcgtaaaggcgtgatgattttcgcttcc
accgttgagcacgcacgcgaaatccacggcttgctgccgccggaacaggccgcgctcgtc
agtgccgaaacgccgggcgacgaacgcgacgccatcattaatgcgtttaagcgccaagag
ctgttatatctggtgaacgttgccgtgctcaccaccggatttgatgcgccccatgtcgat
ctcatcgccattttgcgccccaccgaatccatcagcctgtatcaacaaattgttggtcgc
ggcctgcgattatcgccgggcaaaacggattgcttaatactcgactacgcgggtaatcca
cacgatctatttacccctgaagtcgggaccaccaaaccgcacagcgacagccaaccggta
caggtattttgtccaggctgtggttttgccaacacgttctggggtaagaccacggaaaat
ggcgatattatcgaacactatggccgtcgctgtcagggctggctagaagacgacgaaggt
ggacgcgagcagtgtgactatcgttttcgctttaaaacctgcccgcactgcggcgcggag
aatgacattgcggcacgtcgctgccatcaatgcaatcaggtgttagtcgatcccgacgac
atgctgaaagaagcgttgaaactcaaagacgccttggtgctacgctgtggcggtatgcag
cttcagcatggggaagatgacaaaggcgagtggctgtcgatcacctactacgacgaagac
ggcgctgacgtaagcgaacgtttccgccttaatacgcccgctcagcgtaccgcatttatg
cagctattcctgcgcccgcacctgcgcgcgcccggcattgagctggtctggagaaaggcg
gcagacatcgtggcgcaacaagataaactgcgttatcccgattttgttgtcgcccgaatg
aaaggccggttttggcagatcagacaaaaagttttcgattatcaagggcgctatcgcaaa
gccgattctctcagcggttag
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