| Entry |
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| Name |
(RefSeq) histone deacetylase HDAC1
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| KO |
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| Organism |
haw Helicoverpa armigera (cotton bollworm)
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| Pathway |
| haw03082 | ATP-dependent chromatin remodeling |
| haw04213 | Longevity regulating pathway - multiple species |
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| Brite |
KEGG Orthology (KO) [BR:haw00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110370102
03083 Polycomb repressive complex
110370102
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110370102
04350 TGF-beta signaling pathway
110370102
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
110370102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:haw03036]
110370102
Enzymes [BR:haw01000]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110370102
Chromosome and associated proteins [BR:haw03036]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
110370102
HDAC complexes
Sin3A-HDAC complex
110370102
BRAF-HDAC complex
110370102
REST complex
110370102
SHIP complex
110370102
MiDAC complex
110370102
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
110370102
Heterochromatin formation proteins
Other heterochromatin formation proteins
110370102
Chromatin remodeling factors
NuRD complex
110370102
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
11:join(5792885..5792933,5793300..5793412,5793746..5793863,5794174..5794274,5794387..5794630,5794765..5794941,5795069..5795171,5795263..5795497,5795590..5795679,5795966..5796116,5796318..5796394)
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| AA seq |
485 aa
MAMQPHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGRCVELVKRFGLPFLLVGG
GGYTIRNVSRCWTYETSVALGVEIANELPYNDYFEYFGPDFKLHISPSNMSNQNTSEYLE
KIKNRLFENLRMLPHAPGVQVQAIPEDAVNDESEDEDKVDKDERLPQSEKDKRITGDGEL
SDSEDEGEGGRRDNRSYRTPQPRKRPRLDKDGSTIKDEIKTEDSKDDVKNINSVEEPKKD
MPPIP |
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| NT seq |
1458 nt +upstreamnt +downstreamnt
atggcgatgcaaccacacagcaagaagagagtgtgctattattatgatagtgatattgga
aactattattatggacagggacatccgatgaaacctcaccgtatacgtatgactcacaac
ttgctacttaattatgggttatacagaaaaatggaaatatatagaccacacaaggctaca
gctgatgagatgacaaagttccactcggatgactacattcgcttcctgcgatcaatcaga
cctgacaacatgtctgagtacaacaaacagatgcaaagattcaatgtgggtgaagattgt
ccagtgtttgatgggctctatgagttctgccagctgtctgctggtggatcagtcgctgca
gcagtaaaacttaataaacaggcttccgaaatctgcatcaactggggtggtggtctccat
catgccaagaaatcagaagcatctggtttctgttacgtgaatgacatagtgttgggcatc
cttgagttgctgaaataccaccagagagtactgtacattgacattgatgttcaccatgga
gatggagtggaagaggctttctataccacggacagagtcatgacagtgtcattccacaaa
tatggagaatacttccctggaacaggtgatttacgtgacatcggcgccggcaagggcaaa
tactacgccgtgaacataccactgcgcgacggaatggatgacgaatcatatgaatccatc
ttcgtgcccatcatctctaaagtcatggagacattccagccgagcgcagttgtgcttcaa
tgtggcgccgattctcttacaggagacaggttgggttgtttcaatctaacagtacgaggc
cacggccgctgtgtagagctcgtaaagagattcggtttaccatttttgctggttggagga
ggaggctacacaattcgtaatgtttcacgttgctggacttacgagacgtcagtagcactt
ggtgttgaaattgcaaatgagcttccatacaatgactacttcgaatactttggtcctgac
ttcaaactgcatatatcaccaagcaacatgtcaaatcaaaacacgtcagagtatttggag
aaaataaagaacaggctctttgaaaatctgagaatgttaccgcatgcaccaggcgttcag
gtacaagccattccagaagacgcggttaacgatgaatctgaggatgaagacaaagttgac
aaagatgaaaggctgccacaaagtgaaaaagacaagcgcataactggtgacggtgagctg
tcggattctgaagatgaaggagaaggtggtcgtcgcgacaacaggtcgtaccggacgccg
cagccgcgcaagcgtccgcgcctagacaaggacggatccactatcaaggatgaaatcaaa
acggaagactcaaaggatgatgtcaaaaacatcaacagtgtagaagaaccaaagaaagac
atgcctccaattccctga |
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