KEGG T05609: 110373700

Helicoverpa armigera (cotton bollworm): 110373700

Entry

110373700         CDS       T05609

Name

(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1

K12815

pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6]

Organism

haw Helicoverpa armigera (cotton bollworm)

Pathway

haw03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:haw00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110373700
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:haw03041]
    110373700
Enzymes [BR:haw01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     110373700
Spliceosome [BR:haw03041]
Complex C
  Other components
   Step II factors
    110373700

SSDB

Motif

Other DBs

NCBI-GeneID:

110373700

NCBI-ProteinID:

XP_063892820

EnsemblRapid:

LOC110373700

LinkDB

Position

11:join(1378422..1378753,1379120..1379419,1379696..1379905,1380333..1380427,1380857..1381059,1381427..1381525,1382079..1382208,1383355..1383444,1383613..1383750,1387136..1387288,1388035..1388228,1472000..1472179,1481032..1481115,1481647..1481797,1482308..1482405,1482780..1483007,1483423..1483594,1484080..1484221,1484791..1484951,1485359..1485599,1486112..1486298)

AA seq 1195 aa
MSEDDENLHRLAGSSGDAPGGLIIKKKEPPGEFQFAKPSLLGLDKLAAAKRKQNRLISFQ
DDNNDDEVEDNKTDASGSKERKYRKHNEETPTYTGGISEQARERMLERLQKREKEAKEKG
VHHSTQEEKKSRSKDDEDDRYYRHRYDRRDRDRRRDDRRDDRRDDRRDRDRDRRRDGRDS
DRRDRDSDRRGESSRRSYYEPRFKDEPRTPSMKVLKPTDKTPWDDDDDDKAPLRKSSWDF
PTPLTKDGGGDRSQRSDRYGKPMRDYKGRPYENTPRATPHKFASSRRGADIDDSDWEEAE
KKLDRAWYNMGEGEADESDPFAGTSAEYVSRKEEQIEKRRNRKVSAQRQQIDKDNELWER
NRMLTSGVVHAINVNNDLDEENVDRVHLLVHNIVPPFLDGRIVFTKQPEPVIPVKDPTSD
MAMNARKGSALVKAFREQKERRKAQKKHWKLEGTKIGNIMGIQKKEEEMEDGPTKDAYKY
AEHMDNQPQEVESKSDFVKKMTISEQRRFLPVFAVREELLQVIRENSVVIIVGETGSGKT
TQLTQYLHEEGFSRLGMIGCTQPRRVAAMSVAKRVSDEMNTKLGDEVGYAIRFEDCSSPN
TVIKYMTDGILLREGLREPDLDNYCAIIMDEAHERSLSTDMLFGLLREVVARRSDLKLIV
TSATMDSTKFSTFFGNVPTFTIPGRTFPVETFFAKNVCEDYVDGAVKQALQIHLQPEEGD
ILIFMPGQEDIEVTCEVLTERLADLDSAPPLTVLPIYSQLPADLQAKIFQRAPPGQRKCI
VATNIAETSLTVDGIMYVIDSGYCKLKVYNPRIGMDALQIYPVSQANARQRAGRAGRTGP
GKAFCLYTQRQYQHELLASTVPEIQRTNLANTVLLLKSLGVEDLLAFHFMDPPPQDTILN
SMYQLWILGALDGTGSLTPLGRQMAEFPLDPPQCHMLIVSAEMGCSVEVLIIVSMLSVPS
VFYRPQGREEEADSVKEKFQVPESDHLTLLHLYNQWKANNYSGQWCTEHFVHGKAMRKVR
EVRQQLKDIMQQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLH
PTSALFGLGNSPDYVVYYELMMTTKEYMHCVTAVDGRWLAELGPMFFSVKETGKTNRDKR
KEAAVHLQRMEEEMKQAEQKMAEERKRREEDVPVKQEIATPGLNTPRRTPHRLGL

NT seq 3588 nt +upstreamnt +downstreamnt
atgtcggaagacgatgaaaacttgcatcgtttggcgggatcttctggtgatgccccgggt
ggcttaatcatcaaaaagaaggaacctccgggggagtttcagttcgccaagccttcgttg
cttggtcttgataaactggcggccgctaaacgcaagcaaaaccggctgatatcatttcaa
gacgacaataatgatgatgaagtggaggataacaaaactgatgccagtggatcgaaagaa
cgtaaatataggaagcataatgaagaaactcctacttataccggtggtatatcggagcaa
gcgcgggaacgcatgctggagcggttacagaaaagggaaaaagaagcgaaagaaaaaggt
gtacaccactccacacaagaagaaaagaaatcacgttcaaaagatgatgaggatgaccgt
tactaccggcatcggtacgacaggagggacagagacagaagaagagatgacaggagggat
gatcggagggatgacagaagggacagagatagggatagacggagggacggtagggactct
gatagaagggatagggatagtgacagaagaggtgaaagttccagaagaagttattatgaa
cctaggtttaaggatgagcctaggactcccagcatgaaagtattaaaaccgactgacaag
acaccctgggatgatgatgatgatgacaaggcacctctccgcaagtccagttgggacttc
ccaacgccactgactaaagatggtggtggtgatcggtcacagagaagtgatcggtatggc
aagccgatgagggattataagggacgaccgtatgagaatacgccaagagctacaccacat
aaatttgctagttcgcgtcgtggtgctgatattgacgattcagattgggaagaggctgaa
aagaaactagatcgagcttggtataatatgggtgaaggtgaagccgacgaatcggatccc
ttcgcgggcacatcagcggagtacgtgtctcgcaaagaggaacagatagaaaagaggcgc
aaccgcaaagtttccgcccagagacaacagatagacaaggacaatgagctgtgggagagg
aataggatgctcaccagtggtgttgtccatgctattaatgttaataatgatttggatgag
gagaacgtagaccgagtacatttgttagtacacaacatagtgccgccattcctcgacggt
cgcatcgtcttcaccaagcagcccgaacctgtcatacctgtaaaagatccaacttcagat
atggcaatgaacgcccgcaaaggttctgcgctagttaaagcattcagagagcagaaggaa
cgcagaaaagcgcagaaaaaacactggaagttagagggaactaagatcggtaatataatg
ggcatacagaagaaagaagaagagatggaggatggaccaactaaagatgcttacaaatat
gctgagcacatggataatcaacctcaagaagtggaatcgaagtcagactttgtgaagaag
atgacaatatctgaacagaggcggttcttacctgtgtttgctgtcagagaagaattactt
caagttattagagaaaatagcgttgtcattattgttggtgagacgggcagcggtaaaact
acgcagctaactcagtacttacacgaggaagggttcagtcgtctcggtatgatcggttgt
acgcaacccaggcgcgtcgccgctatgtccgtcgctaagagagtgtccgatgagatgaat
actaagcttggtgacgaagtgggctacgccatccgtttcgaagactgttcatcacccaac
acggtgatcaagtacatgactgacggtatcctgctccgcgagggtctacgcgagccggac
ctggacaactactgcgccatcatcatggacgaagctcatgagcggtcactgtctaccgat
atgctgttcggattgttgagagaggtggtagcccgtcgttccgacctgaagctgatcgtg
acatcagctaccatggactccacaaagttctccacattcttcggcaacgtcccgacattc
accatccctggacgtaccttccccgttgagactttcttcgccaagaatgtctgcgaagac
tatgtggatggtgctgtgaaacaggcgcttcaaatacatttgcagcctgaagaaggagat
atacttatattcatgcctggacaggaagatattgaagtgacttgtgaggtgttaacagaa
cgtctagcagacttggacagtgcgccccccctcacagtgctgccgatatactcgcagctg
ccagctgacctgcaagccaagatcttccagcgagcaccaccaggacagaggaagtgtatc
gtcgctacaaatattgctgagacatcactgacggtcgatggtattatgtacgtaatagat
agtggatactgcaaactgaaggtgtacaacccaaggatcggtatggatgcgctacagatc
tacccagtaagtcaagcaaacgctagacagcgtgccggccgcgccgggcgaacggggccc
ggcaaggccttctgtctatacacacagcggcagtaccaacatgagttgttagcctccacc
gtgcctgagatacagaggaccaatctagctaacactgtgttactgttgaagagtctgggt
gttgaggatctgttggctttccattttatggacccgccgccgcaggacacgatcctgaac
tcgatgtaccaactgtggatcctgggcgcgttagacggcacgggctcgctaaccccgctg
gggcggcaaatggcggagttcccgctcgacccgccgcagtgccacatgctcatcgtcagc
gcagagatgggctgcagtgttgaagtgcttattattgtatcgatgctgtcagtgccgtca
gtgttctaccggcctcagggtcgcgaggaggaagctgactccgtcaaggaaaagttccaa
gtgcccgagtctgatcatcttactctactgcatttgtacaaccagtggaaggctaacaat
tactcaggccagtggtgtaccgaacactttgttcacggcaaggcgatgcgtaaagtacgc
gaagtgcgtcaacagctgaaagacatcatgcaacaacaacgactgccgctcgtgtcgtgt
gggactgactgggatactgtccgcaagtgtatctgttcagcatacttccagcaagcagct
cgcctcaaaggcataggagaatacgtgaactgccgcacaggcatgccttgtcaccttcac
ccgacttcagcactgttcggtcttggcaactcgcccgactatgtggtctactacgagctg
atgatgaccacgaaggagtacatgcattgtgtgacggctgtcgatgggagatggttggct
gagctgggacccatgttcttttcggttaaggagactggcaaaacaaatcgcgacaaacgc
aaagaagcagccgtccacctccaacgaatggaagaagaaatgaagcaagcagaacagaag
atggcagaagaacgaaagagaagagaagaagacgtgccagttaaacaggagattgcgacg
ccaggactcaacacgcctaggagaacgccacataggctgggactttga

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