KEGG   Helicoverpa armigera (cotton bollworm): 110378545
Entry
110378545         CDS       T05609                                 
Name
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:haw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    110378545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:haw03400]
    110378545
Enzymes [BR:haw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     110378545
DNA repair and recombination proteins [BR:haw03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     110378545
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT RNA_ligase DNA_ligase_IV BRCT_2 RTT107_BRCT_5 LIG3_BRCT
Other DBs
NCBI-GeneID: 110378545
NCBI-ProteinID: XP_049692521
EnsemblRapid: LOC110378545
LinkDB
Position
3:join(10302065..10302229,10302702..10303011,10303184..10303359,10303688..10303861,10304141..10304336,10304565..10304778,10304933..10305068,10305516..10305636,10306456..10306649,10306740..10306877,10306955..10307216,10307921..10308192,10308483..10308812)
AA seq 895 aa
MANEVTPANEIKFEKLCNLLEQLHKRKKQRQEQDKILGAFINEFKMTASQIVGQKNPSIF
PILRLLLPKLDRERNAYNLKENKLGVLLVKVLSLSKQSRDAQKLLNYRSVSNSTDSDFAG
VAYFVFKSRLSPKSDGFTVGDINEILDKIASAEVGKKASVLDDMFSHVINKVTADQLKWF
LRIILKDLKLEIGSNRILGLFHPDAPEYFETCGLLSKVCEELGDGDARPLELGIQMFLAI
SPMLSERLDVKHIARQLSSDKTYQIENKFDGERFQMHMENGRFEYFSRRGFSFAKNYGSS
YDSGLLTPYLKECFSSEVSSIILDGEMMGWHKERECFSCKGMAFDVKKITENSKFRPCFC
AFDILYFNGRTLVGPPEKGGLPLSERLRILDKIFANVPGVIQHSERQIISQRTIFPDILE
ALNKAIENQDEGIVVKDVDSYYIPNKRNAGWYKIKPEYTEGTMSDLDLVIIGAEEAANKR
QGRAKSFLVACSDGGAPGKTPDRWVLVGRVSTGLTFDERESLCAALERHWVSYRQTPAPT
HLYFNKEKPDFWILPEHSIVLTVRASELIRTTGFGADYTLRFPRVMRVRDDKPYQDCMTL
AEFNQLCAHKGPVVKLSTNLINGEQMDEIKPRAKRKTQQPQVAEQFQISSTGDVEATSKA
LLGRKVCILSDDDDCKRPELCKIIESHGGKVVANTGLDTWCCIAGRVTAHVKAVMTARAY
DVLPTSWLRALPPSPAPAHPAPLDMLALSDVTRRKLARHYDVHGDSYTELIDEDTLVKCF
KKMDDDIPIYLTTQEMLNLDKEIFGDNNPHSFLRPCCIHIRNPESIDAIVARMYGATVLD
NTASHCTHIVVPTTIDKTELDNIKKSSNGLIVSEDWLNECFSQKQLVPEEKFLVM
NT seq 2688 nt   +upstreamnt  +downstreamnt
atggccaatgaagtaacgccagcaaatgaaataaagtttgaaaagctgtgcaatctctta
gaacaattgcacaagaggaaaaagcaaagacaagagcaagataagatattgggagctttt
ataaacgagttcaaaatgactgcatcacaaatcgtaggccaaaagaaccccagcattttt
cctatcctaagactgctgttacccaaactggatagagaaaggaatgcatacaatttaaaa
gagaacaaattgggtgttctactggtcaaagttctatcgttgagcaagcagtcgcgagat
gctcaaaagctgttgaactacagatccgtcagtaattccacagacagtgacttcgctggc
gtggcctactttgtgtttaagagtagacttagcccaaaatcagatggattcaccgttggt
gatatcaatgaaatccttgataaaattgcttctgctgaagttggaaagaaagcctctgtt
cttgatgacatgttcagtcatgtgataaacaaagtgaccgcggatcaattgaagtggttc
ctgaggataattctcaaagacctaaagcttgaaataggaagcaatcgtatattagggctg
tttcatcccgacgctcccgaatattttgagacatgtggacttttgtccaaggtgtgtgaa
gaactaggcgatggagacgctcgtcccctagagctcggaatacagatgttcctagccata
agccccatgctttctgaacgccttgatgtcaaacatatagccagacaactttcctcggac
aaaacttatcagatagaaaataagtttgatggggagcggtttcagatgcacatggaaaac
gggcggtttgaatacttttcgagaagagggttttcctttgccaagaattacggaagctca
tacgactccgggttgttgacgccttatctcaaggagtgcttttcgtcagaagtctcaagt
attattctagacggcgagatgatgggctggcacaaggaacgagagtgtttcagctgtaaa
ggaatggctttcgacgttaagaagataacggagaactcaaagttccgtccatgtttctgt
gcgtttgatatcctgtacttcaatggcagaactctagtggggccgccggagaaaggaggt
ttaccactcagtgagagacttcgtattttagacaagatatttgctaacgtccctggagtt
atacagcatagtgaacgccagattatttcgcagaggacgatatttcctgatatactggaa
gctttgaacaaggccatagagaaccaagacgagggtatagttgtcaaagatgtggattcc
tactacattccaaataaacgcaacgctggctggtacaagattaaacctgagtacacagag
ggaactatgagcgaccttgacctcgtcatcatcggtgctgaagaagctgcaaacaagaga
caaggacgcgccaagagctttctcgtcgcctgctccgatggtggcgctcccggtaaaacg
cctgatcgctgggtattagtggggcgagtatcaacgggcctaacatttgacgagcgtgag
agtttgtgtgccgctctcgaacgtcactgggtctcctacagacagacgcctgccccgact
cacttgtatttcaataaggagaaaccagacttctggatattacctgaacattccattgtt
ttaacggtccgggcgtcggagctgatcagaaccacgggatttggggcggattatactctt
cgctttccgcgtgtcatgagagtacgagatgataaaccttatcaagactgcatgactttg
gccgaattcaatcaactttgcgcacataaaggaccagtagtcaagttgagcactaatcta
attaatggagagcaaatggatgagataaaaccccgggcgaaacggaagactcaacagccg
caagtcgccgagcagtttcagatcagctcaactggtgacgtcgaagctacgtcaaaagca
ttgctcggaagaaaagtgtgtatattgtcggatgatgacgattgtaagcgaccggagctt
tgtaagatcattgagtcccacggagggaaggttgtggcgaatacggggttggacacatgg
tgctgcatagcgggtcgtgtcacagctcacgtgaaggcagtcatgacggctcgagcatat
gacgtgttgcccacatcctggctgcgggccctgccgccctcccccgcgcccgcgcacccc
gcgcctctcgacatgctggccctcagtgacgtcacgcgacgcaagctcgctcgacactac
gatgtgcatggagacagctatacggagctaatagatgaagacacgctcgtcaagtgtttt
aagaaaatggatgatgatataccgatctacctaacaactcaagagatgctgaacttagat
aaggagatatttggcgataacaacccacactcgtttctacgcccgtgctgcatacacata
cggaaccctgaaagcatagacgctatagtagctcgaatgtacggggccacggtacttgac
aatacggcttctcactgcacccatatagttgtacccaccactatagataaaacagaactt
gataatattaaaaagtcatccaatggcttgatagtcagtgaagattggctaaatgaatgc
ttttcgcaaaaacagttagttcctgaagaaaagtttcttgttatgtga

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