Hyalella azteca: 108669548
Help
Entry
108669548 CDS
T07535
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
hazt
Hyalella azteca
Pathway
hazt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108669548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hazt03041
]
108669548
Enzymes [BR:
hazt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108669548
Spliceosome [BR:
hazt03041
]
Complex A
U2 snRNP components
U2 related factors
108669548
Complex B
108669548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
108669548
NCBI-ProteinID:
XP_018012407
UniProt:
A0A8B7NFL2
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MNLRERRSKSRSRSRSHSVEKDLKQSKSRSRRSRSKDRRRSRSRDRRDRTKRSRSRERKR
SKSRERKDRKRSRSRSRDRKDRSKRSRSRDRKRSRSRDRKKSKKSKSRSRSKSRDDPKVF
DPTVLDKEEAEKQLEAEMRKRRERIEKWRAEKKKKEIEMTKREAEKGTITVPKGSAKAWN
LEDDEDEEDGAGEKKDNADDEVDPLDAFMTGIQEEVRRINRAGKPSTTIHSKKADTLVTP
PAPAVTTQPDAVPQPPPLPPATTTTTDAATTTITNTVKNGTGELEVPAVKPVIVTGVAST
VKKPVIITGVANKKSRKKGELMEQNQDGLEYSSEEEGEDLKDTMLSIAKKGRKELAKVDH
GTVEYVPFRKDFYIEVPEIASMSKEEVETYREELEGIKVKGVGCPRPIKSWPQCGVSKRT
LDVLKKCKYEKPTPIQAQAIPAIMSGRDVIGIAKTGSGKTLAFLLPLIRHVVDQPPLLDT
DGPIAIIMTPTRELAMQIGRECRKFCRSSLRIAVVYGGTGISEQIAELKRGAEIIVCTPG
RMIDMLAANNGRVTNLKRVSYIVLDEADRMFDLGFEPQVMRIIENVQPERQTVMFSATFP
RQVEALAKKILQKPIEIMVGGRSVVCKDVSQHVVILEEDDKFLKLLELLGQFYELGQTII
FVDKQESADSLYKDLLSHSYRAMVLHGGVDQIDRDTNIMDFKAGRVPVLVATSVAARGLD
VKQLVLVVNFDAPNHYEDYVHRCGRTGRAGNKGHAYTFLSPDQPRYAGNIIRAMEMSETP
VPQELHDLWNAYKARMESEGKKVKTGGGFHGRGFKFDDEEANFATEKKKFQKAALGLQDS
DDEDIEGDIEQHIIKLLNTKRTVKEVKPTPLISPALLASIGGGPGTLGGTLLNMQASASA
AAATAASKLELAKRLAQKFNAQHGAGGHESTVKGASQQAAEFVMKGGTSMMQPAISAKTV
AEQMAQKLNNRLNYQPSGDLDDEDNPNSSMAEESYQKYEEELEINDFPQQARWRVTSKEA
LAQISEYSEAGITVRGTFCPASKNPPEGERKLFLAIESTSELAVSKAKAEIIRLIREELV
KLRTSGGGLKSQGRYKVL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcgagaaaggcggtcaaagagccgctcaagaagcagatctcacagcgttgaa
aaagatcttaaacaatccaaatcgcgatcgcggcggtcgagaagcaaagatcgacgtcga
tcaagatcgcgggatcgtcgtgaccgaaccaaaagatcgagatcgcgcgagaggaagcga
tcgaagtcccgtgaacgaaaagatcgcaagcgctctcggtcaagatctcgtgaccggaaa
gacagatctaaaagatcccgatccagggatagaaaaagatctaggtccagggatcggaag
aagagcaagaagagtaagagcagaagtaggagcaagagtagggatgatcctaaagtgttt
gatcctaccgtcctagataaggaagaagcagagaagcagctggaggcggagatgcgtaag
cggagagagcgcatagagaagtggagagcggagaagaagaagaaggagatcgagatgacg
aagagggaggcggagaagggcaccatcaccgtgcctaagggctcggctaaggcctggaac
ctcgaggatgatgaggatgaagaggatggtgcgggcgagaagaaggataatgcagacgat
gaagttgacccgctggacgcgttcatgacaggcatacaggaggaggtgcggcgcatcaac
agggccggcaaacccagcactacaatacactctaaaaaagcagatactttggttacccct
cccgcccctgcggtaaccacccaaccagacgcagtccctcaaccaccaccattaccaccc
gcaaccaccaccaccacggatgctgcaaccaccaccataaccaacaccgtgaaaaacggc
acgggtgaacttgaagtccccgcggttaagcccgttattgtcacgggtgtcgcgagcacg
gttaagaagcccgttataataacgggcgtcgctaacaagaagagtcgcaagaaaggggag
ctaatggagcagaaccaagacggtctggagtacagctccgaggaggagggagaggatctc
aaggataccatgcttagtatagctaagaagggcaggaaggaactggccaaagtagaccac
gggacggtggagtacgtaccatttcgtaaggatttctacatcgaggttcccgagatcgcg
agcatgagtaaagaagaggtcgagacctacagagaagagctcgagggcattaaagttaag
ggtgtggggtgcccacgtcctatcaagtcgtggccgcagtgtggcgtcagcaaacgaacg
ctcgatgtcctcaagaaatgcaaatatgagaagccaacgcctatacaggcccaggccatc
ccagcaatcatgtcaggccgtgacgtcatcggcatcgccaagactggcagtggcaagact
ttggctttcctcctgccgctgatacgccatgtcgtggaccagccgccactgctggataca
gatggacctatagccattattatgacccctacacgggagctggctatgcaaataggtcga
gagtgtcggaagttttgccgctcgtcactgcggatcgccgtagtttacggaggcaccggc
atcagcgaacaaatcgcggaactgaagcgaggagcggaaatcatcgtgtgtactccgggt
cgcatgatcgacatgctggccgctaacaacggacgcgtgaccaacctcaagcgagtctca
tacatcgtcctggacgaggctgatagaatgtttgatctcggctttgaaccgcaggtaatg
cgtatcatcgagaacgtgcagccagagcgacagacggtgatgttctcggccaccttccct
cggcaagtcgaagctttggccaagaagatccttcagaagcctatagaaattatggtgggc
ggtcggtcggtggtgtgcaaggacgtaagtcagcacgtggtgatcttagaggaggacgac
aagttcctgaagttgctggagctgctggggcagttctacgagctcggacaaactatcatc
tttgtggacaagcaagagagcgctgactcactctacaaggacctactgagccactcgtac
cgtgccatggtgctacacggcggggtggaccagatagaccgcgacacgaacatcatggac
ttcaaggcgggccgcgtgcccgtcttggttgccacgtccgtcgctgcccgcggcctcgac
gtcaagcagctcgtcctcgtcgttaactttgatgctcccaaccactacgaggactacgta
cacaggtgcggacgcaccggacgtgcgggcaacaagggccacgcgtacaccttcctctcc
cccgaccagccccgctatgccggcaacatcatcagagccatggagatgagcgagactcca
gtccctcaggagctccatgacctgtggaacgcgtacaaagcgcgcatggagtctgagggt
aaaaaagtaaaaactgggggcggtttccacggccgaggcttcaaattcgacgacgaagag
gcaaactttgccactgagaagaaaaaattccagaaagctgcgcttggtctgcaggattct
gacgatgaggacatcgagggcgacatcgaacaacatattattaaacttctgaacactaaa
cgcactgtcaaggaagtcaagcctacaccgctgatctcaccggcgctactagcgtcaatc
gggggcgggccaggaacgcttggcgggaccctgctgaacatgcaggcctccgcctctgct
gctgctgctacagctgccagcaaacttgaacttgctaagagacttgcccagaagttcaac
gctcagcatggtgcaggcggtcatgaaagcaccgtgaaaggcgccagccaacaggcggcc
gagtttgtgatgaagggcggcacgtcgatgatgcagcccgccatcagcgccaagaccgtc
gctgagcagatggcgcagaagctgaacaaccgtctgaactaccagccctctggagacctg
gacgatgaagacaaccccaacagcagcatggcggaggagagctaccagaaatatgaagag
gagctcgagatcaacgacttcccccagcaggcgaggtggcgtgtcaccagcaaggaggcc
ctcgctcagatatctgagtactctgaagctggcatcactgtcagaggcaccttctgccca
gctagcaagaaccctccagaaggagaacgtaaactcttccttgccatcgagtcaacatct
gagcttgccgtctccaaagccaaagccgagatcatcagactcatcagggaagaactggtc
aagctccgcacaagtggcggaggactcaagagtcagggtcgttataaagttttgtaa
DBGET
integrated database retrieval system
