Hyalella azteca: 108678131
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Entry
108678131 CDS
T07535
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
hazt
Hyalella azteca
Pathway
hazt03022
Basal transcription factors
hazt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hazt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108678131
09124 Replication and repair
03420 Nucleotide excision repair
108678131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hazt03021
]
108678131
03400 DNA repair and recombination proteins [BR:
hazt03400
]
108678131
Transcription machinery [BR:
hazt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108678131
DNA repair and recombination proteins [BR:
hazt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108678131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA_3
IBR
VWA
Motif
Other DBs
NCBI-GeneID:
108678131
NCBI-ProteinID:
XP_018021967
UniProt:
A0A8B7P820
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MDEEDPKEYRWESGYEKTWEAVTEDTAGRIESSVTDMVLRSKRKRMLARQEAGVRLGIMR
HVFIVLDMSSAMNEQDLKPTRHHCLVKILQEFVPEFHEQNPISQLGLIITHNKIAKKFTD
LSNNPLKHLENLTKLLEVPCRGEPSLQNSLELAVSSLCHLPPHTSREVLILYAALTTCDP
GEISQTIQKVHANNIRVSVVGLAAELHICKLLSSTTGGTFSVCLNDLHLRELVRDQLEPP
PAAASMDHTLIKVGFPHQVTANAKPAMCMCHLDDFPSLSTRGYYCPQCNAKYCDLPAECR
VCGLMLVTAPHLARSYRHLFPLKQFVEEEYSADLAPNCYGCFKLFDKDGFDKHVYRCSSC
KQLFCVDCDIFLHDTVHTCPGCASNPHF
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaagatccaaaagagtaccgctgggagagtggatacgaaaaaacatgggag
gccgtcacggaggacaccgctggccgcatcgagtcgtccgtcacagacatggtgctgcgc
agcaagcgcaagcgaatgcttgcacgtcaggaggcaggagtgcgtcttggcatcatgcga
cacgtcttcatcgtcttggacatgtccagcgccatgaacgaacaagacctcaagccaact
cgtcaccactgcctcgtcaagattttacaagagtttgttccggaattccacgagcagaat
cccatcagtcagctcggcctcatcatcacacataacaaaatagccaagaagttcacggac
ctcagcaacaaccctctgaagcacctcgagaacctgacgaagctattggaggttccttgt
cgaggcgagccaagccttcagaactcccttgagctggcggtgtcttctctatgccacctg
ccgccccacacctcgcgtgaagttctcatcctctacgctgccctcaccacctgcgaccct
ggcgagatcagccagaccatacagaaagtccatgccaacaacattcgagtatccgtggtg
ggactcgctgctgaactgcacatctgcaaactgctcagctcaacaaccggcggtacattt
tcggtttgtctcaatgacctccacctgcgagagctggtgcgtgaccagctcgagcctcca
ccagccgccgccagcatggaccacacgctcatcaaagtcggcttcccacatcaggtgacg
gcgaacgcgaagcctgcgatgtgcatgtgtcacctcgacgactttcccagcctcagcacc
cgcggctactactgccctcagtgcaacgccaaatactgcgacctgcctgccgagtgccgc
gtgtgtggcctcatgctggtcacggcgccccacctagccaggagctacagacatttgttt
ccactgaagcagttcgtcgaggaggagtatagtgctgatttggcccccaactgctatggc
tgcttcaagctcttcgacaaagacggtttcgataagcatgtataccggtgcagcagctgt
aagcagctcttctgtgtagactgcgacattttcctgcatgacaccgtccacacgtgtcca
ggctgtgcctccaacccccacttttga
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