Hyphomonadaceae bacterium UKL13-1: AEM38_05015 Help Entry AEM38_05015       CDS       T04338                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism hbc  Hyphomonadaceae bacterium UKL13-1 Pathway hbc03030   DNA replication hbc03410   Base excision repair hbc03420   Nucleotide excision repair hbc03430   Mismatch repair Brite KEGG Orthology (KO) [BR:hbc00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     AEM38_05015    03410 Base excision repair     AEM38_05015    03420 Nucleotide excision repair     AEM38_05015    03430 Mismatch repair     AEM38_05015  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:hbc03032]     AEM38_05015    03400 DNA repair and recombination proteins [BR:hbc03400]     AEM38_05015 Enzymes [BR:hbc01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      AEM38_05015 DNA replication proteins [BR:hbc03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      AEM38_05015 DNA repair and recombination proteins [BR:hbc03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      AEM38_05015    NER (nucleotide excision repair)     GGR (global genome repair) factors      AEM38_05015    MMR (mismatch excision repair)     DNA ligase      AEM38_05015   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       AEM38_05015 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 PTCB-BRCT Motif Other DBs NCBI-ProteinID:  AMS30818 UniProt:  A0A7U4QWF3 LinkDB All DBs Position 1114232..1116613 Genome browser AA seq 793 aa AA seqDB search MSTLPVDSLTKDQAAHELERLAREISENRRAYFEEDAPTLSDAEYDALERRNRLIEQRFP ALVRADSPSKSVGSAASTKFTKITHQVSMLSLDNAFTDGDVADFLGRAQRFLGFEDQSAL ACTAEPKIDGLSLSVRYEKGQFKHAVTRGDGKEGEDVTANVLTIGDIPKHLYGSDWPEIL EVRGEVYLSHAAFEALNQAQIEAGLPLYANPRNAAAGSLRQLDPAITAQRPLSFFAYAWG EVSTPFATTQMDAVASFARWGFKTNADMKLCADTADLLAHYQDLGLRRAELGYDIDGVVY KVNDLALQARLGIVTRFPRWAIAHKFPPERAITILDAIDIQVGRTGALTPVARVRPVTVG GVVVSNATLHNEDFIAGKALDRVTGLPVRGGKDLRLGDHIVIQRAGDVIPQIVDILEDKR DTDSQPFAFPHICPCPLKTPAIRGGDEQGGDLDVVRRCTGEFACPFQRLRHLELFVSRKA FDIDGLGPRQLQDFFDWGLVKEPADIFKLADHRAQLEGRDGYGQTSLNNLFAAIDQRRDI DLARFIFGLGVRHVGETTSGVLARAFGSWDTFKAAIDLAQSQRANEAYRQFEAIHGLGPR ALEALLNWAAGAEPPAQANMFDDVAENLAKLRLSEVAMPARKALIEVFPDWAGLVATLKT AAAGRPQDGYAALAAIDGMGPVATDALLDFFAEPHNRDAVDRLLEQVRPRDEEAPASDSP VTGLTIVFTGSLETMTRDEAKAQAIRLGAKVAGSVSAKTDIVVAGPGAGSKLTKASELGV RVMSEAEWAAFVG NT seq 2382 nt NT seq  +upstreamnt  +downstreamnt atcagcacgcttcccgtcgattcgctcaccaaagaccaagccgcccacgagctggagcgg cttgcccgcgaaattagtgagaataggcgggcctatttcgaagaagatgcccccacgctc tccgatgccgaatatgacgcattagagcggcgcaatcgcctcatcgagcaacgtttcccg gccttggtgcgggccgacagcccatcgaaaagcgtgggcagcgccgcctcgacgaaattc accaaaatcacccaccaggtctcgatgctctcgctcgacaatgcctttaccgatggcgat gttgcagactttctgggccgggcgcagcgctttttggggtttgaggatcagagcgctttg gcctgtaccgcagagcctaaaattgacggcctgtcgctgtcggttcgctatgaaaagggt cagttcaagcacgccgtcacccgaggggatgggaaagagggtgaggatgtcaccgccaat gtgctgaccattggcgatattcccaagcatttatacggctccgattggccggaaatcctg gaggtgcgtggcgaagtctatctcagccatgcggcgtttgaagcgctgaaccaagctcag atcgaagcgggcctgccgctttatgctaatccacgaaatgcggcagcgggcagcttgcgc caattggatcccgccatcactgcccaacgcccgttgagcttttttgcctatgcttggggg gaggtgagcacaccgtttgcgaccacccaaatggatgcagtggcaagttttgcgcgctgg ggctttaagaccaatgcggacatgaagctgtgcgccgataccgcagaccttctggcccat tatcaggatttgggcctgcgccgggctgaactcggctatgatattgatggggtggtgtat aaggtcaatgatctggccttacaggcccgcctcggcattgtgacccgcttcccccgttgg gccatcgcccacaaattcccgccagagcgggcgatcaccatcctcgacgcgattgatatt caagtgggccgcacaggcgctttgacccccgttgcccgcgtccgcccggtgacggtcggg ggcgtcgtggtttccaatgcgacattgcataatgaggactttatcgccggcaaggcgctg gaccgggtgacaggcctgccggtgcgcgggggcaaggatttgcggctaggcgaccatatt gtcatccagcgggctggtgatgtgatcccgcaaatcgtcgatatcctggaagataagcgc gacacagacagtcagccattcgccttcccccatatctgcccatgccctttgaagacgccg gccattcgcggcggggatgagcaaggtggcgatcttgatgttgtgaggcgctgtaccggg gaatttgcctgcccattccagcgcttgcggcatttggaactatttgtcagccgcaaggcc tttgacattgacggcctaggcccccgccaattgcaggactttttcgactggggtctcgtc aaagagcctgccgacattttcaagctagcagaccatcgcgcgcaattagaaggccgcgac ggctatggccaaacctcgctcaacaatctgtttgcggccatcgatcagcgccgggatatt gatttggcccgcttcatctttggtttgggcgtgcgccatgtaggcgagacgaccagcggt gtgctggcccgtgcgttcgggtcttgggatactttcaaagcggccattgatttggcccaa tcccagcgcgccaatgaggcttatcgtcagtttgaggccatacatggcttgggaccgcgt gcgctggaggcgctgttgaactgggccgcgggtgctgagcctccggcgcaggcgaatatg tttgacgatgttgccgaaaatctcgcgaagctgcgcctttccgaagtcgctatgccagcc cgcaaagccttgatcgaggtctttcccgattgggccggtttggttgcgactttaaaaact gccgctgcagggcgcccccaagatggctatgccgccttagccgcgattgacggtatgggc ccggtcgccaccgacgcgcttctcgacttctttgctgagccccataatcgcgacgcggtg gaccgtctgttagagcaggttcgcccgcgcgatgaagaagccccggcctcagatagcccc gtgaccggcctcaccattgtgtttacgggaagtctcgaaaccatgacccgcgacgaggca aaggcgcaagccattcgccttggggccaaggtcgctggcagtgtctctgccaagaccgat attgtggtcgcaggcccgggtgctggctcaaaactcaccaaggcgagcgaattgggtgtg cgggtgatgagcgaagccgaatgggctgcgtttgttggctga

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