Halomonas beimenensis: BEI_3049
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Entry
BEI_3049 CDS
T05125
Symbol
radD
Name
(GenBank) ATP-dependent RNA helicase YejH
KO
K19789
DNA repair protein RadD
Organism
hbe
Halomonas beimenensis
Brite
KEGG Orthology (KO) [BR:
hbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbe03400
]
BEI_3049 (radD)
DNA repair and recombination proteins [BR:
hbe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
BEI_3049 (radD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
zf-tcix
AAA_16
DZR
zinc_ribbon_2
AAA_30
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ATJ84036
UniProt:
A0A291PAV1
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Position
complement(3223486..3225252)
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AA seq
588 aa
AA seq
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MSAVPPSLRPYQQQAVARVVEHFRAGDEPAVVVLPTGSGKSLVIAELARLARGRVLVLAH
VRELVEQNHAKYRAYGLEADIFSAGLGRKDAGRKVVFGSVQSVVRNLDAFDDDAFTLLVI
DECHRVSLDEDSGYRRVIAHLREHNPRLKVLGLTATPYRLGQGFLYHRHYHGMVRGAEDC
FFRDCVFEQPLRLMVKQGYLAEPRLVDAAVERYDFSSLEPGSGGLFQEAELNRVVAGHRA
TPAIIEEVVARAAERAGVMLFAASVAHAEEILGYLPASEAALVTGATPAAEREGIIAAFK
ARSVKYLVNVSVLTTGFDAPHVDLIAILRPTESVGLYQQIVGRGLRLAPGKADCLILDYA
GNPWDLYAPEVGSPRPAADTEPVQVECPRCGHANLFWGRRDGELVIEHFGRRCQGLVEDV
GGRLAQCDFRYRFKVCDHCGAENDTAARRCHGCEALLVDADDKLREALKLRDARVLRVSG
MELEATVNGRGLPRLKVVYHDEDGATLAEWFALETPAQRGAFAAAFLREHLRAPGSRWSP
TTPDEVIRERRRLRAPDFVIGRKVGRHWQVRRKLFDYTGRYRRAAEAG
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgtcccgcccagcctaagaccctaccagcagcaggcggtggcccgggtggtc
gagcacttccgggccggcgacgagcccgccgtggtggtgctgcccaccggcagcggcaag
tcgctggtgatcgccgagctggcgcggctggcccgtggccgggtgctggtgctggcccat
gtgcgcgaactggtcgagcagaaccacgccaagtaccgggcctacggcctggaggccgac
atcttcagcgccggcctgggccgcaaggatgccggccggaaggtggtcttcggctcggtg
cagtcggtggtccgcaacctggacgccttcgatgacgacgccttcaccctgctggtgatc
gacgagtgccaccgggtctcgctcgacgaggactccggctaccgccgggtcatcgcccac
ctgcgcgagcacaatccccggctcaaggtgctggggctgaccgccacgccctaccggctg
gggcagggcttcctctatcaccgccactatcacggcatggtgcgcggcgcggaggactgc
ttcttccgcgattgcgtcttcgagcagcccctgcgcctgatggtcaagcagggctacctc
gccgagccgcgcctggtcgatgccgccgtggagcgctacgacttctcctcgctcgagccc
ggcagcggcggcctcttccaggaggcggagctgaatcgggtggtggccggccaccgggcc
acccccgcgatcatcgaggaagtggtcgcccgggccgccgagcgcgccggcgtcatgctc
ttcgccgccagcgtggcccatgccgaggagatcctcggctacctgccggcgagcgaggcg
gcgctggtcaccggggcgacccccgccgccgagcgcgagggaatcatcgccgccttcaag
gcgcgcagcgttaagtacctggtcaacgtgtcggtgctgaccaccggcttcgacgcgccc
catgtggacctgatcgccatcctgcggcccaccgagtcggtggggctctaccagcagatc
gtcggccgcggcctgcgcctggccccgggcaaggccgactgcctgatcctcgactatgcc
ggcaacccctgggacctctatgccccggaggtggggagccccaggccggcggcggacacc
gagccggtgcaggtggagtgtccccgctgcggccatgccaacctgttctgggggcgccgt
gacggcgagctggtcatcgagcacttcgggcggcgttgccagggactggtggaggacgtc
ggcggccggctcgcgcagtgtgacttccgctatcgcttcaaggtctgtgaccactgtggc
gccgagaacgacaccgccgcgcgtcgctgccacggctgcgaggcgctgctggtggacgcc
gacgacaagctgcgcgaggccctcaagttgcgcgacgcccgggtgctgcgcgtctcgggc
atggaactggaggccaccgtcaacggccgcggcctgccgcggctcaaggtggtctatcac
gacgaggacggggccaccctggccgagtggttcgccctggagacgccggcccagcggggt
gccttcgccgccgccttccttcgcgagcacctgcgcgcgccgggcagtcgctggtcgccg
accacgcccgacgaggtgatccgcgagcgacgtcggctgcgcgccccggacttcgtgatc
ggtcgcaaggtcggccgccactggcaggtacggcgcaagctgttcgactacacggggcgc
taccggcgcgccgccgaggccgggtga
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