Halogeometricum borinquense: Hbor_02260
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Entry
Hbor_02260 CDS
T01359
Name
(GenBank) ERCC4-like helicase
Organism
hbo
Halogeometricum borinquense
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
DEAD
RNA_helicase_helical
ResIII
HHH_2
HHH_5
HHH
Helicase_C_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ADQ65836
UniProt:
E4NSU8
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Position
206141..208672
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AA seq
843 aa
AA seq
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MAAADDPAHVDHPLLSPSFIERRLYQIRLASAARDAHTLVCLPTGLGKTTVSLLVTAERL
HEVGGKALFLAPTKPLVQQHADFYREALEIPDDEIVVFTGDVRPDDRAALWDDARIVIAT
PQVVENDLIGNRISLREVTHLTFDECHRGTGDYAYVYIAERYHADAERPLVTGMSASPGG
DKESILEVCENLGLVEVEVMTEEDADVDEYTYDTDVEWERIQLPDEILAIRDAVNEVIKD
RLEKLKSLGVTNTTSPDVSQKQLNGMRAELQKLMNNDQSEGYKGMSTHAEVMKLRRAVEL
VETQSVESVRRYFERQRNAARSSGASKASQRLVAEPKVREAMRKAESFDGLHPKFSQTRI
LLAQTLGIQDGERVIVFTESRDTAEALTDFLSESFDARRFVGQGDKEGSDGMTQKEQQET
LDEFRNGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAIRSIQRKGRTGRQAEGRVIVL
MAENTRDEAYFWISRRREKEMKSELRDLKGVADEVEEELDDSQKGLDAFSGGDSAGTDDG
ESSGAIANGGTAAATTETPDASTAEADSGTDGGTASGTDATDTNSNDDQAGLDSFSASDE
EIARADEESEAAVEDGDGTVATAGRDDEVVEIVVDQRELDSNIAKDLSTRDGIETRLETL
AVGDYVLSDRVAVERKSVSDFLDTLTGGDRSLFEQIGDLSRAYARPILILEGEGLFEERN
IHPGAIRGALASLAVDFDVSVLQTRDEDDTAELLLTIATREQTERERSVSVHGGKSTKTL
SEQQEYVVSAIADIGPVTARSLLEEFGTVEAVMTAREEDLLEVSGIGSVTAERIRDVIGS
EYE
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgatgaccccgcacacgttgatcatcctctcttgagtccgtcgttcatc
gagcgacgactgtatcagattcgactggcgagtgctgcacgcgacgcgcacacgctggtt
tgtcttcccacgggtctcggcaagaccacagtcagcctcctcgtgactgctgagcgactc
cacgaggtgggcggcaaagcgctctttctcgcgccgacgaaaccgctggtccagcagcac
gccgacttctaccgcgaagccctcgaaattcccgacgacgagattgtcgttttcactggc
gacgttcgccccgacgacagggcggccctctgggatgacgctcgcatcgtcatcgcaacc
ccgcaagtcgtcgaaaacgacctcatcgggaatcgaatctccctccgagaggtgacgcat
ctcacgttcgacgagtgccaccgcggcaccggcgactacgcgtatgtctatatcgccgaa
cgctaccacgccgacgccgagcgtccacttgtcaccgggatgagtgcgtcgcccggcggc
gacaaggagtcaatcctcgaagtttgtgagaacctcgggctagtcgaagtcgaggtgatg
acggaggaggacgccgacgtagacgaatacacgtacgacaccgacgtcgagtgggaacgt
atccaactccccgacgagattctggcgatacgtgacgccgtcaacgaggtcatcaaggac
cgactggagaaactgaaatcgctgggcgtgacgaacaccacaagtccggacgtgtcccaa
aagcagttgaacgggatgcgagcggagttgcagaagttgatgaacaacgaccagtcggag
gggtacaagggtatgtcaacgcacgcggaagtgatgaaactccggcgtgccgtcgaactg
gtcgagacgcagtcggtcgaatccgtccgacgttacttcgaacgccagcggaacgccgca
cgttcttcgggtgcatcgaaggcgagtcaacgactcgtcgccgaacccaaagtccgagag
gcgatgcggaaggccgagtcgttcgacggcctgcacccgaagttctcgcagacgcgtatc
ctcctcgcacagacgctcggcatccaagacggcgaacgcgtcatcgtcttcaccgagtcg
cgtgacactgcggaggccctcaccgacttcctctcggagtcgttcgacgctcggcgattc
gtcggacagggcgacaaagagggttccgacgggatgacgcaaaaagagcaacaggagacg
ttagacgagttccgaaacggcgagttcgaggtcctcgtctccacttccgtcgccgaagaa
ggacttgacgtacccgaagtcgatttggtgctctttttcgaacccgttccgacggcgatt
cgctccatccagcggaagggccgaaccggccgccaagcggaaggacgtgttatcgtcctg
atggcggagaacacgcgcgatgaggcgtacttttggatctctcgccgccgcgagaaggag
atgaagtccgaactccgcgacctgaagggcgtcgcagacgaggtcgaagaggaactcgac
gactcacagaaaggtctcgacgcgttctcaggcggcgatagtgcgggcacggacgacgga
gagtcgtccggagcgatagcgaacggcggaactgcggccgcaactactgagacacccgac
gcgtccactgccgaggctgattccggaaccgacggcggaaccgcctccggaaccgacgct
accgacaccaactcgaacgatgaccaagccggattggattcgttttccgcgtcggacgag
gaaatcgctcgcgccgacgaggagagcgaggccgcggtagaggatggagacggtaccgtc
gccaccgccgggcgagacgacgaggttgtcgaaatcgtcgtcgatcaacgcgaactcgac
tcgaacatcgcaaaggatctctcgacgcgcgacggcatcgagacgcgactggagacgctt
gccgtcggcgactacgtcctttcggaccgcgtcgcagtcgagcggaagtccgtgtcggac
ttcctcgacaccctgactggcggtgaccgctcgctgttcgagcagatcggtgacctctct
cgcgcgtacgcacgaccaatcctgattctcgaaggtgaggggctgttcgaggagcggaat
atccacccgggcgcgattcgcggcgcactcgcctcactcgcggtggatttcgacgtgagc
gtccttcagacccgtgacgaggacgacacagccgaactgctcctcactatcgccacgcgg
gaacagaccgaacgcgaacgttcggtgagcgtccacggcggcaagagtacgaagacgctg
agtgaacaacaggagtacgtcgtctccgccatcgcggacatcggccccgtcacggcccgc
tcgctcttagaagagttcggtaccgtcgaagcggtgatgaccgcccgcgaggaggacctt
ctcgaagtgtcgggaatcggatcggtcaccgctgaacgtattcgggacgttatcggatcc
gagtacgaatag
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