Halomonas sp. TD01: HPTD01_108
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Entry
HPTD01_108 CDS
T08977
Name
(GenBank) RND efflux system, inner membrane transporter
KO
K18138
multidrug efflux pump
Organism
hbp
Halomonas sp. TD01
Pathway
hbp01501
beta-Lactam resistance
hbp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HPTD01_108
01503 Cationic antimicrobial peptide (CAMP) resistance
HPTD01_108
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hbp02000
]
HPTD01_108
01504 Antimicrobial resistance genes [BR:
hbp01504
]
HPTD01_108
Transporters [BR:
hbp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HPTD01_108
Antimicrobial resistance genes [BR:
hbp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HPTD01_108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
CAH1041630
UniProt:
A0AA35DY90
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All DBs
Position
HaloTd01MainCirc:complement(123341..126532)
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AA seq
1063 aa
AA seq
DB search
MNFSNFFISRPIFATVLAIILTLVGTMAMRILPIEQYPSVVPPTVSVQAQFPGADAETVA
QTVAAPLAEAINGVEDMLYMTSNSADNGTMSLSVAFNIGTDGDINTINVNNRVQGALSQL
PEAVQSQGVKVELRSDSILMLVALTSPSGDYNKIYMQNYATLNILDELRQVPGVGNAEVL
GGGEFAMRVWMDPDKLAQYNLTPSEVASAIRAQNTEIPAGNLAATPQSEPRAYTYTITAG
GRLSGTDDFRNIFLRTNPDGSSLRLEDVARIELGASFYGVDARLNGATMTPIIINQQPGA
NALETADAVRTTMEELSGRFPPGLEYVTPYDTTLFIDASVETVLKTFIEAFLIVIVILFI
FLQNWRFTVIAMSVVPVSVIGTFAGFYLFGFSINLLTLFALVLSIGIVVDDAILVVENVE
RVLSEEDDISVRDATIRAMKEVGGPVIATSLIMAAVFVPVAFLGGFTGQIYQQFAITVAI
SVALSALMALTFTPALSAIFIKHNLHKTKQSAFRRAITTPLRLFDRFFAGFTAVYMWFVK
KLVRFWVLALALTVAVGAGSYWLYANTPSTLVPETDQGIVLVSVSLPDAASLSRTQAYMA
ELSSQIEAIPGVEYSSAVAGYDILSSAVNTARGIMFINMKTWAERDLTANELVGRIMQLG
ASIDGGSAMAFNVPPIMGLSTTGGFTGYLQSFEGASTRELYQASLQIMQAANQHPALSRV
FTTFNVNVPSYRADIDQQKALSYGVALENINSALANTFGNGFVNFFSYQNRNFQVYLQNE
DEFRKTPDDVSSVYVRGGNGERIPLSEFVTLERQTGPSVVSRFGVYAGAQFQGNPAPGYS
SAQAIEAMEEVVQETLGRNWGMGWTGTAYQESNLGNTATLAIVFGILMVFLILAAQYESW
SLPLAVLTATPFAFLGGIGGIVLRGLDTSVYVQIGMLVVVGLAAKNAILIVEFAEMQRKE
QGKSIREAAITAAELRFRPIVMTSLAFIFGTLPLALASGASDVSSHHIGTTVAVGMASVA
VLGSLFIPSFYAMIATVSDWLYRKRHPDRDGNNEQAALGHDQP
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttccaacttcttcatcagccgaccgattttcgccaccgttttggcgattatc
ttgacgctggtaggtacgatggcgatgcgaatactgccgattgagcagtatcccagcgtt
gtacctcccacggtgtcggtacaggctcagttcccaggggctgatgctgaaacagttgcg
cagactgtagccgcaccgcttgctgaggccatcaatggtgttgaggacatgctgtacatg
acctcaaacagtgctgataacggcaccatgagcctgagcgtggcgttcaatatcggcacg
gatggtgatatcaataccatcaacgtgaacaaccgagtgcagggcgcactttcacagcta
cccgaggcagttcagtctcaaggggtgaaagtcgaattacgctctgactctattttgatg
cttgttgccttgacgtcacctagcggtgactacaacaagatatacatgcagaactacgcc
acgcttaatatcttggatgagctacgccaagtaccaggcgtaggtaatgccgaagtgttg
ggtggtggtgagtttgctatgcgggtgtggatggatcccgataagctggctcagtacaac
cttacgcccagtgaagtggccagtgctattcgtgcgcagaacaccgagattcctgcgggt
aacttagcggcaacgccacaaagcgaaccgcgcgcctatacctatacgattaccgccggc
gggcgtttgtcgggcactgatgatttccgcaatatcttcctgcgcaccaacccggacggc
tcttcgctgcggctagaggatgtggcgcgtattgagttgggcgcttcgttctatggcgtg
gatgctcgcttaaacggcgccaccatgacgccaattattattaaccagcaacctggtgca
aacgcgctggaaactgcagatgcggtacgcaccaccatggaagagctttcggggcgtttc
ccgccagggcttgagtatgtaacgccttatgacaccactctgtttattgatgcatccgta
gaaacggtactaaagaccttcatcgaagcgttcctgatcgttatcgttattctgtttatc
ttcttgcagaactggcgctttacggtcattgctatgtcggtcgtgccggtgtcggttatc
ggcacctttgcgggcttttacttgtttggcttctcaatcaacctgctaacgcttttcgcc
ctggtgctatcgatagggatagtagtggacgatgcgattctggtggtcgagaacgtcgag
cgggtactgagcgaagaagacgatatttcggtgcgtgatgcgactattcgcgcgatgaaa
gaggtcggtggcccagttattgccacgtcgcttattatggcggcggtatttgtgccggta
gcatttttgggtggttttaccgggcaaatttatcagcagtttgcgattaccgtggcgata
tcggtggcgctgtcagcgttgatggcactgacattcacccccgcgctgtcggctatcttt
attaagcataacctgcataaaacgaaacagtccgcgtttcggcgtgcgattaccacgccg
ctgcgtctgtttgaccgcttcttcgctggctttaccgccgtttatatgtggttcgtgaaa
aagttggtgcgcttctgggtgttagcgctcgcgctaactgtggcggtgggggctggttct
tactggctctatgcgaatacgccttccacgctagtgccggaaactgaccaaggtatcgtg
ctggtcagcgtttccttgccagatgccgcgtcacttagccgaacgcaagcttacatggcc
gagctcagttcacagatagaagctattcctggcgttgagtactcctctgcggtcgcaggt
tatgacattctgtcgagcgcggttaatacggcgcgtggcatcatgtttatcaacatgaaa
acctgggctgagcgagatctaaccgcgaatgaattggtaggccgtatcatgcagctgggc
gcgagcattgatggtggttcggcgatggcgtttaacgtgccgccaataatgggactctcg
acaacgggtggcttcactggctacttgcaatcttttgagggtgcttccacgcgtgagctt
tatcaagcgtcattgcaaattatgcaggcagctaaccagcatccggctctgagtcgcgta
ttcacgacatttaatgtcaacgtaccttcttaccgtgcggatatagaccagcaaaaagca
ctcagctatggcgttgctcttgaaaatatcaactcagcgctagccaatacctttggtaat
ggttttgttaacttctttagctaccaaaaccgcaacttccaggtctatttacagaatgaa
gatgaattccgtaaaacaccggatgatgtcagtagtgtttatgtgcgcggtggcaatggc
gagcgtattccgctttccgagtttgtaacgcttgaacgccaaactggcccatcggtggtc
tcccgtttcggtgtttatgcgggcgctcagttccaaggcaacccagcgccaggttacagc
tctgcacaggctattgaagccatggaggaagtggttcaggaaacgctaggtagaaactgg
ggcatgggctggacaggtacggcgtaccaagagtctaaccttggtaataccgccacgctt
gctatcgtgtttggtatcttgatggtgttcttgatcctggcggcgcagtatgaaagttgg
tcgcttcctctcgcagtactaaccgccacgccgttcgccttcttaggggggattggtggc
attgtgctgcgcggcctggacaccagtgtttatgtccagattgggatgctggtggtcgtt
ggcttggctgctaagaacgcgatattaattgtcgagtttgctgagatgcagcgcaaagag
cagggcaagtcgattcgtgaagcagcgattactgctgcagagcttcgcttccgtcccatc
gtcatgacctcgctggcctttatcttcggcaccttgccgttggcactggcctctggcgca
agtgatgtgagcagtcaccacataggtaccaccgttgcggtcggtatggcatctgttgcc
gtgctaggaagcctgtttattccaagcttctacgcaatgattgccacggtctccgattgg
ctctatcgcaaacgccaccctgaccgggatggtaacaacgagcaggcagcgctaggtcac
gaccaaccgtaa
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