Halomonas sp. TD01: HPTD01_398
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Entry
HPTD01_398 CDS
T08977
Name
(GenBank) Chromosome partition protein smc
KO
K03529
chromosome segregation protein
Organism
hbp
Halomonas sp. TD01
Brite
KEGG Orthology (KO) [BR:
hbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hbp03036
]
HPTD01_398
Chromosome and associated proteins [BR:
hbp03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
HPTD01_398
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CAH1041920
UniProt:
A0AA35GVT8
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Position
HaloTd01MainCirc:complement(405228..408719)
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AA seq
1163 aa
AA seq
DB search
MRLTSIRLVGFKSFVDPVTVPFDGNMTAIVGPNGCGKSNIIDAVRWVMGESSAKTLRGES
MADVIFNGSTGRKPISQASIELKFDNRDGGMGGVYAQYSEIAVKRLVTRDGQSNYFFNGQ
KCRRRDIADLFMGTGLGPRSYAIIGQGMISRLIEARPDDLRATLEEAAGISKYKERRRET
ENRMRRTQENLERLDDIREELDKQLERLKRQAEAAKRYQELKQQEYRLKGELALVRGRAL
RAEQSHQESRVRELEIAVEKDVFGVRQCETRLEQAREQHDELADVLDRHQQQFFETTTRI
ARLEQDQAHRRSREAQLASDIATARRDLDEQRRVSEGDQERFVAIEARLEDLLPEHEALE
EQLETLEQTLADATPVLEAAEQQWADAENHWRDASREADRSQDQLRDLEQRIARMQAQNQ
RRRQQRGELADVTELRNEHAECQAQREEAEQRAEAFQAERDQWQQRYSDAKTAYQQASQA
RDHQRAELTQHQGELSSLKALIDAALADHDPDLSDALVAQGLADAPRLGEAISVAPGWER
VISWLLAPWLNARLVSANQLTALPNALATDWCLIDQAERPASSAQRLDSLVKGAGALGGW
LSSIHYAETNEDADARLADLAPGESVVSREGVWRGRGWLHQQANGEGVDALLVTRRRFDE
LDARLTQDEDALALLDEQCEAASEAIEALEQTREQQAEQERAHAAVLQQLAVKEQRLAQR
LEHLESRATELDDELAQLQEDEAELTLTLEEQRARWHAAMEQLEAATEARETSAEHRGHQ
REQRDLLNQQHAPMKARQQALALERERLNAERDSLRAQQSRSSDSEERLSLRIAELEESR
EMLVEPDELAAEELEELLHQREQQERRLNDTRQQAQALAEQLRNDELARQQHERNLEQSR
EQLQQRRMDVQALALKAATQDEQLAELGHDPDVLAEHLPSDASETAWQERLENTTDKIRR
LGAINLAAIEEYDQQAERRNYLEAQHAELTEALETLERAIKRIDQETRVRFRETFDQVNT
GLQTLFPRVFGGGAAWLTLTGDDLLETGVAIMARPPGKKNSTIHLLSGGEKALTALSLVF
AIFQLNPAPFCMLDEVDAPLDDANVGRYAKLVKEMSESVQFIYITHNKIAMEAAERLMGV
TMQEPGVSRLVSVGIDEAAALVD
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttaacctctattcgtcttgttgggttcaagtcttttgttgatccagtaacggtg
cctttcgatggcaatatgactgccatcgttgggccaaatggctgtggcaaatccaatatc
atcgatgcagtgcgctgggtaatgggggagtcctccgctaaaactctgcgcggcgaatcc
atggctgatgttattttcaacggctccacgggccgtaagccgatcagtcaagcttctatc
gagctcaaattcgataaccgcgatggcggtatgggcggcgtttacgctcagtactcagaa
attgcggtaaaacgcttagtcacccgcgacggccaatccaattacttctttaacggtcaa
aagtgccgtcggcgagatatcgccgacctgtttatgggcaccggtttaggcccacgttct
tacgccattattggccagggaatgatttcacggctaatcgaagcacgtcccgatgacctg
cgtgccacgcttgaagaggctgccggtatttcaaaatacaaagagcgccgccgggaaacc
gaaaaccgcatgcgccgcactcaggagaacttggaacgcctggatgatatccgtgaagaa
ctggacaaacagctcgaacgtctcaagcgtcaggcagaagcagccaagcgctatcaagag
ttaaaacagcaggagtaccgcctaaaaggcgagctggcgttagtgcgcggacgtgcattg
cgcgctgagcaatctcatcaagagagccgagtacgcgagctggaaattgcggtagagaaa
gatgtctttggcgtgcgccagtgtgaaacgcgcctggaacaagcgcgcgaacagcacgat
gaactggccgatgtactggatcgccatcagcaacagttttttgaaaccaccacccgtatt
gcccgcctggagcaagatcaagcgcaccgacgcagtcgtgaagctcaattggccagcgat
atagcaacggcccgccgcgatcttgacgaacagcgtcgggtcagcgaaggcgaccaggag
cgttttgtcgccatagaggctcgcttggaggatttgcttccggagcatgaagcccttgaa
gagcagctagagacgcttgagcaaacgttagcggatgcgactcccgtcctagaagctgcc
gaacagcagtgggcagatgcggagaatcactggcgcgatgccagtcgggaagcggaccgt
agccaagaccagttacgcgacttagagcagcgcattgcgcgcatgcaggcgcaaaatcag
cgccgccgtcaacagcgtggcgaacttgcagatgtcactgaattgcgtaacgaacacgct
gaatgccaagcccagcgagaagaggctgagcaacgtgctgaagccttccaagccgaacgt
gaccagtggcagcaacgctatagcgatgccaaaacagcttatcaacaggcctcccaggct
cgtgatcaccagcgtgccgaattaactcaacatcaaggcgaactctcgtcactaaaggcg
ttaattgatgctgccctagcagatcacgaccctgatttaagtgacgcattagtggctcaa
ggcttagccgatgcgccacggctcggtgaagcgattagtgtggcacctggctgggagcga
gtgatttcctggctgcttgcgccgtggttaaacgcccgcttagtgtctgcgaaccagcta
accgcgctacctaacgcccttgccactgattggtgcttgattgatcaagctgagcggcct
gcgtcatcagcgcagcgcttggattcgttggtgaagggagccggtgcgttaggggggtgg
ttatcaagtattcactacgctgaaacgaacgaagatgctgatgcgcggttagctgactta
gcgccaggggagagtgttgtcagtcgggaaggcgtgtggcgcgggcgcggctggctgcac
cagcaggctaacggtgaaggcgtcgatgcactgctggtcacacgccgccggtttgatgaa
ttagacgcccgtctcacacaggatgaagacgcgttagcgttgctggatgagcagtgcgaa
gccgcgagcgaagctattgaggcgctagagcaaacccgcgagcagcaggccgagcaagag
cgtgcccacgcggctgtgcttcagcaacttgcagtgaaagagcagcgactagcccaacgt
ctggaacatttagagagtcgcgccactgagttggatgatgaactcgctcagctacaagag
gatgaggcggagttaacgctcactctagaagagcagcgcgctcgatggcatgccgcgatg
gagcaactggaagccgctaccgaagcccgtgaaaccagcgctgaacatcgcggccatcag
cgtgagcagcgtgacctgttaaatcaacagcatgctcctatgaaggcgcgtcagcaggca
ttggcactagagcgagagcggttgaacgctgaacgggatagcctacgtgcccagcaaagt
cgcagtagcgacagcgaagagcgcctttcgctacgtattgctgagttagaagagtcgcgg
gaaatgctggtagagcccgatgagttggctgccgaagagttagaagagctgctacaccag
cgcgagcagcaggaacgccgcctcaatgacacacgccagcaagcccaggcattggcggag
cagctgcgcaatgatgagctggcccgccagcagcatgagcgtaacttggagcaaagtcgt
gaacagttgcagcagcgccgtatggatgtacaagcgctggcgcttaaggcggctactcag
gatgaacaattagcagaactgggccatgacccagatgttctggccgagcatctgcctagc
gatgccagtgaaactgcttggcaggaacggttggaaaacacgacagataagattcgccgt
ttaggtgccatcaaccttgcggcaatcgaagagtacgatcaacaggccgaacggcgtaac
tatctggaagcgcagcacgctgagcttacggaagcattggaaaccttagagcgggctatt
aaacgcatcgatcaggaaacccgcgtgcgttttcgagaaacattcgatcaagttaacact
ggcctacaaacgctatttccacgggtgtttggcggaggggctgcttggttaacgctcact
ggggatgatttgctagaaaccggtgtggcaattatggcgcgaccgccaggtaagaaaaac
agcaccattcacctattgtcgggtggtgaaaaggcgctaacagcactgtcgttggttttt
gcaatttttcagctgaatcctgcgcctttctgcatgctggacgaggtagatgccccgttg
gatgatgccaacgtagggcgctatgccaaacttgttaaagaaatgtcagaaagcgttcag
tttatctatatcacccacaataaaatcgcgatggaggccgccgagcgcttaatgggggtc
accatgcaggagcctggtgtgtcgaggcttgtatcggtgggtattgatgaggctgctgcg
ctggttgattga
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