Hevea brasiliensis (rubber tree): 110635013
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Entry
110635013 CDS
T05150
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03082
ATP-dependent chromatin remodeling
hbr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110635013
03083 Polycomb repressive complex
110635013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hbr03036
]
110635013
Enzymes [BR:
hbr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110635013
Chromosome and associated proteins [BR:
hbr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
110635013
HDAC complexes
Sin3A-HDAC complex
110635013
BRAF-HDAC complex
110635013
REST complex
110635013
SHIP complex
110635013
MiDAC complex
110635013
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
110635013
Heterochromatin formation proteins
Other heterochromatin formation proteins
110635013
Chromatin remodeling factors
NuRD complex
110635013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
110635013
NCBI-ProteinID:
XP_021639884
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MSSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYVSYQILKFLI
FLVCFLFPVTFAEHGIFCVMQRPHKAYPVELAQFHSADYVEFLHRISPDTQHLFANELAR
YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI
NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDLFFPGTGDVK
DVGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYLPGVIVLQCGADSLARDRLG
CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDTELPNEIPDNE
YIKYFAPEYSLKIPGGQIENLNSKSYISTIKMQVLENLRCIQHAPGVQMQEVPPDFYIPD
FDEDEQNPDERMDQHTQDKHIQRDDEYYEGDNDNDHNMDVP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagctctaaggacagaatttcttacttctacgacggggatgtgggtagcgtttacttt
gggccgaaccatccaatgaagcctcaccggctttgtatgactcaccatcttgttctctcc
tacgagctccataagaagatggagatttacgttagttatcaaattttaaaatttctcatt
tttctagtctgttttcttttccctgtaacttttgcagaacatgggattttttgtgtaatg
cagcggcctcacaaggcatatcctgttgagcttgcacagttccattcagctgactatgtt
gaatttttacaccggatttccccagatactcaacacctgtttgcaaatgaattggcaaga
tataatcttggagaagattgtcctgtctttgaaaatctattcgaattttgtcaaatttat
gctggtggaacaatagatgctgcacgtagattaaacaatcaactatgtgacattgctata
aattgggctggtggtttacaccatgccaagaagtgtgaggcatctggattttgttacatc
aacgacttagttttgggaattttggagcttctgaaatatcatgcacgtgttttatacatt
gatatagacgtacatcatggtgatggtgttgaagaggccttttatttcactgacagggtg
atgactgtgagttttcacaagtatggggatttgttctttcctggaactggagatgttaag
gatgtaggagaaagagaaggaaagttttatgctataaatgttcccctgaaggatggaata
gatgacaccagcttcacccggctttttaaaactattatttccaaggtggtagaaacatat
ctgccaggtgtgatagttcttcagtgtggagcagattctttagctagagaccgcttgggc
tgtttcaacctctctattgatgggcatgctgaatgtgttaggtttgtgaagaaattcaat
ttgcctttgctggttactggaggtggtggatacacaaaagagaatgttgctcgatgttgg
actgttgaaacaggagttcttttagatacagaactacccaacgagatcccagataacgag
tatatcaaatattttgcccctgagtattcattgaagattccaggtggacaaatagagaat
ttaaatagcaaatcttacattagcacgatcaaaatgcaagttctggaaaatcttcgttgc
atacaacatgctccaggtgtacaaatgcaggaggttccacccgacttttacattcctgat
tttgatgaagatgagcaaaacccggatgaacgcatggatcagcatactcaagacaagcat
atccagcgagatgatgaatattatgaaggggacaatgataatgatcataacatggatgtt
ccctga
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