KEGG   Hevea brasiliensis (rubber tree): 110635013
Entry
110635013         CDS       T05150                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
hbr  Hevea brasiliensis (rubber tree)
Pathway
hbr03082  ATP-dependent chromatin remodeling
hbr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110635013
   03083 Polycomb repressive complex
    110635013
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hbr03036]
    110635013
Enzymes [BR:hbr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     110635013
Chromosome and associated proteins [BR:hbr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     110635013
   HDAC complexes
    Sin3A-HDAC complex
     110635013
    BRAF-HDAC complex
     110635013
    REST complex
     110635013
    SHIP complex
     110635013
    MiDAC complex
     110635013
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     110635013
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    110635013
  Chromatin remodeling factors
   NuRD complex
    110635013
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 110635013
NCBI-ProteinID: XP_021639884
LinkDB
Position
Unknown
AA seq 461 aa
MSSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYVSYQILKFLI
FLVCFLFPVTFAEHGIFCVMQRPHKAYPVELAQFHSADYVEFLHRISPDTQHLFANELAR
YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI
NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDLFFPGTGDVK
DVGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYLPGVIVLQCGADSLARDRLG
CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDTELPNEIPDNE
YIKYFAPEYSLKIPGGQIENLNSKSYISTIKMQVLENLRCIQHAPGVQMQEVPPDFYIPD
FDEDEQNPDERMDQHTQDKHIQRDDEYYEGDNDNDHNMDVP
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgagctctaaggacagaatttcttacttctacgacggggatgtgggtagcgtttacttt
gggccgaaccatccaatgaagcctcaccggctttgtatgactcaccatcttgttctctcc
tacgagctccataagaagatggagatttacgttagttatcaaattttaaaatttctcatt
tttctagtctgttttcttttccctgtaacttttgcagaacatgggattttttgtgtaatg
cagcggcctcacaaggcatatcctgttgagcttgcacagttccattcagctgactatgtt
gaatttttacaccggatttccccagatactcaacacctgtttgcaaatgaattggcaaga
tataatcttggagaagattgtcctgtctttgaaaatctattcgaattttgtcaaatttat
gctggtggaacaatagatgctgcacgtagattaaacaatcaactatgtgacattgctata
aattgggctggtggtttacaccatgccaagaagtgtgaggcatctggattttgttacatc
aacgacttagttttgggaattttggagcttctgaaatatcatgcacgtgttttatacatt
gatatagacgtacatcatggtgatggtgttgaagaggccttttatttcactgacagggtg
atgactgtgagttttcacaagtatggggatttgttctttcctggaactggagatgttaag
gatgtaggagaaagagaaggaaagttttatgctataaatgttcccctgaaggatggaata
gatgacaccagcttcacccggctttttaaaactattatttccaaggtggtagaaacatat
ctgccaggtgtgatagttcttcagtgtggagcagattctttagctagagaccgcttgggc
tgtttcaacctctctattgatgggcatgctgaatgtgttaggtttgtgaagaaattcaat
ttgcctttgctggttactggaggtggtggatacacaaaagagaatgttgctcgatgttgg
actgttgaaacaggagttcttttagatacagaactacccaacgagatcccagataacgag
tatatcaaatattttgcccctgagtattcattgaagattccaggtggacaaatagagaat
ttaaatagcaaatcttacattagcacgatcaaaatgcaagttctggaaaatcttcgttgc
atacaacatgctccaggtgtacaaatgcaggaggttccacccgacttttacattcctgat
tttgatgaagatgagcaaaacccggatgaacgcatggatcagcatactcaagacaagcat
atccagcgagatgatgaatattatgaaggggacaatgataatgatcataacatggatgtt
ccctga

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