Hevea brasiliensis (rubber tree): 110645718
Help
Entry
110645718 CDS
T05150
Name
(RefSeq) polyadenylate-binding protein 4-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03015
mRNA surveillance pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110645718
09123 Folding, sorting and degradation
03018 RNA degradation
110645718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110645718
03041 Spliceosome [BR:
hbr03041
]
110645718
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110645718
mRNA cycle factors
Stress granule specific factors
110645718
Spliceosome [BR:
hbr03041
]
Complex C
Other components
Complex C specific factors
110645718
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
MARF1_RRM1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
110645718
NCBI-ProteinID:
XP_021654645
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MVAAPSLQSPGDLRQRRSLYVGDLDPEVTEMDLKTAFCSVCPFFNLRLCRCAFTGRSLCY
GYVDFYSHNQASEALHKLNHTYLKGKPVRLMWLQRDPFARKSGIGNLFVKNLDSSIDSAR
LEGMFCKFGTILSCKVVEENGRSKGFGFVQFDSEDSALAARTALHDTMLEGKTLYVSKFV
KKSERIAATLHEESKFTNLYVKNLADNVTEDTLQNMFSVFGKVFSVVIMKDHDGISRGFG
FVNFDSPEGAKKALDALNGSLLGSRTLFVGRAQKKAERIKILQYEYKDIFNNRIEKLKLS
NVYVKNLDVHVDDNKLREIFSTCGKIISAKVMRHDNGVSRSFGFVCFSSPEEAKKAPNTM
NGIMLEGKSLYVAIAHCKKYRHPELEKYFAACRSLSLYPSNCNVIAPSIGPVYYNLSTFH
PPIPFLQNPVSFQNFGANMGVQYPLGAENYQQQFCSYIPLGQMHQSTQNPSVESCQQHSV
KCAISHFRDRDLNYGHVGIQNFGHSKRQNKKGGGAGSTCRGSKATRCFAAAKSPENSKKD
VGNCLHPFVENLQPECAGNMPGMLLEANALQVDRAAQVLKEANALNSADIGAILPKSARC
LSY
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggcaccgtcactgcagtctccgggggacctgagacaaagaaggtcgctgtac
gtgggtgatttggaccctgaagtcacagaaatggacctgaaaactgcgttttgctctgtg
tgtccctttttcaaccttcggctctgccgttgcgctttcaccggcaggtctctttgttat
ggctatgtcgacttctactctcacaaccaagcatctgaagctctccataaactaaatcat
acgtacttgaagggaaaacccgtgaggttaatgtggttgcagagggacccttttgcaaga
aagagtggcattggcaatctttttgtgaaaaatctagactcttcaattgatagtgctcgc
ttggagggaatgttctgcaagtttgggactatactttcttgcaaggtggttgaagaaaat
ggcagaagtaaaggttttgggtttgtccagtttgattcagaggattctgccttggctgca
cgaaccgctctccatgataccatgcttgaaggaaaaacactgtatgtatccaaattcgtc
aagaaaagtgagaggatagcagccacacttcatgaagaatcaaaatttacaaatctctat
gtaaaaaatctggctgataatgtgacagaggatacccttcaaaacatgttttctgtattt
gggaaggtttttagtgttgtcatcatgaaggatcatgatgggatatcaagaggttttgga
tttgtcaactttgattcaccagaaggtgctaagaaagctcttgatgctttgaatggttct
ctactaggttccaggactttgtttgtgggaagagcccaaaagaaagctgagagaataaag
atattacaatatgaatataaggatattttcaacaaccgtattgaaaagttgaaattatca
aatgtgtatgtgaagaatcttgatgtacacgttgatgataacaaattacgagaaatattc
agtacctgtggaaagataatttcagcaaaagtgatgcggcatgataatggggtaagtaga
agctttggatttgtgtgtttttcaagtcctgaagaagcaaagaaagctccgaacactatg
aatggaatcatgctcgaggggaagtctctctatgtggcaatagctcactgtaaaaaatat
cgccacccggaactggagaagtattttgctgcatgccgatctctgtcattatatccttct
aactgcaatgtcattgcaccttcaattggtccagtttattacaatttgtctactttccat
ccaccaatccctttcctgcagaatccagtctcattccaaaattttggtgcaaatatggga
gtgcagtatcctttgggagctgagaattaccagcaacagttttgctcatatattcctttg
ggacaaatgcaccaaagcactcagaacccctcagtagagtcctgccaacagcattctgtg
aaatgtgctatctcacattttcgtgatcgagatctgaattatggccatgttgggattcaa
aattttggccatagcaaaaggcagaacaagaaaggtggaggtgcaggaagtacctgcaga
ggatcaaaagctaccaggtgttttgctgcagcaaaatctcctgaaaactccaagaaagac
gttgggaattgtctccacccctttgttgagaatcttcagcctgagtgtgcagggaatatg
cctggaatgctgttggaggccaatgcattacaagttgacagggcagctcaagtgctgaag
gaggccaatgcattgaatagtgcagatattggtgcaattttgcccaagtctgctcgctgc
ttgagctactag
DBGET
integrated database retrieval system
