Hevea brasiliensis (rubber tree): 110654987
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Entry
110654987 CDS
T05150
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
hbr
Hevea brasiliensis (rubber tree)
Pathway
hbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110654987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbr03019
]
110654987
Messenger RNA biogenesis [BR:
hbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110654987
mRNA degradation factors
5'-3' decay
Decapping complex
110654987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40
Motif
Other DBs
NCBI-GeneID:
110654987
NCBI-ProteinID:
XP_021666832
LinkDB
All DBs
Position
Unknown
AA seq
1472 aa
AA seq
DB search
MASPSNSPNQGGGAFDVNKLFKPSSSPMNMNMMQPSNPAQQQQQQQQLLRPPLSPSNSNP
VVGNLTASNSFPPPSSLPLSSPPYLTPSSSYPPPTGPYHPYHPHYLSPYPPPTPPSQLQQ
HHNQFLTNMQQQNRPQPISSFPPAAATATAVAAPSTTPSPPPFSSNNPNPSGVLMDMLTN
QNHHHHQQQQPPPSTNLTMPFSSPSSSSAVSNFNAPIPSAPPVSLASPTHQLRQPNPAPM
RMLSSKLPKGRHLIGNHVVYDIDVRLQGEVQPQLEVTPITKYVSDPGLVLGRQIAVNRNY
ICYGLKPGAIRILNINTALRSLLRGHNQKVTDMVFFAEDVHLLASTCIDGRVFIRKINEE
SDDEEKSQIFERIVLALQIITEGESVHPRVCWHPHKQEILMVAIGNRILKIDTIKVGKGE
GFSAEKPLNCSIDKLIDGVQLAGKHEGEVTELSMCQWMTTRLASASADGTVKIWEDRKAV
PLAILRPHDGNPVNSVAFLAAPHRPDHIVLITGGPLNQEVKIWVSASEEGWLLTSDSESW
QCSQTLTLKCSTESAVEDAFFNEVVALPNAGLFLLANAKKNAIYAIHIEYGPYPAATRMD
YIAEFTVTMPILSLTGTSDSLPNGEHIVQVYCVQTQAIQQYALDLSQCLPPPLENMELEK
TESNVSCVFGAATSDGSTILESSHGSKPIEVPLAKGTPIQPMFSSSSENASTASHAESLP
SSDVTSLPDISTSCVETKASPLPSHNSIENINTVSPPLPPSPQLSRKLSGFQSPSNSTES
SMQLNNHVVDQSVLDYLLEHRMDTAKDNMADIPSSGDNLRKGEKNISQTDISVVLEPPVM
FKHPTHLITPSEILSRSTSSAEDSQIGQVMNVGEAKVQDVVVNNDIESVELEVKVVGETR
TNQSNDFDLPRESHAYVPEKKEKSFHSQASDLSIQMARDCCVEAYSSVGGIQKAVESGVS
EISDRPSENGEDEKQDIRKDTPGKFGESETSVVVPQSSAPSTKGKRQKGKNSQLSGPSSP
SPSPFNSTDSSIEPGCSSGAQSSDAALSQLSAMQDMLDQLLSIQKEMQKQMTMMISVPVS
KEGKRLETSLGRSIEKVVKANTDALWARFQEENTKHEKLERDRTQQLTNLITNCVNKDLP
STLDKTLKKEIAAVGPAVARAITPILEKSISSAITESFQKGVGEKAVHQLEKSVSSKLEG
TVARQIQSQFQTSGKQALQDALRSSLEAAIIPTFEISCKSMFDQIDSTFQKGLINHLNAT
QQQFDSTHSHLAIALRDAINSASSITQTLSGELAEGQHKLLAIAAAGANSKLGNPSLSNG
PLAGLHEMAEAPLDPTKELTRLIAERKFEEAFTAALQRSDVSIVSWLCSQVDPQVVLSMV
PLPLSQGVLLALLQQLACDISKETSRKLAWMTDVAVAINPADPMIAVHVRPIFDQVHQIL
SHQRNLPTTSASESASIRLLMHVINSVKMSCK
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacctagtaattctccaaatcaaggaggtggtgcctttgatgtgaataagctg
ttcaagccatcttcaagccctatgaatatgaatatgatgcaaccatcaaacccagcacaa
cagcaacagcagcagcagcagctgctgcggcctcctttgagtcccagcaactctaaccca
gttgttggcaatctaacagcttctaattccttccctcccccttcatctcttcctctttct
tctcctccttatttaactccatcttcctcttatcctcctcccactgggccttatcaccct
tatcaccctcactacctatctccttatcctcctcctactcctccttcacaacttcaacag
catcacaaccagttcctcactaacatgcaacagcagaatagacctcaacccatctcttct
tttcctcctgctgctgctactgctactgctgttgctgcaccttctactactccttctcct
cctccattctcgtctaataaccctaatcccagtggtgtattgatggacatgctcaccaat
cagaaccaccaccaccaccagcagcaacaacctcctccctccaccaatctcaccatgccc
ttctcttccccatcttcttcatcagctgtatccaacttcaatgctcccatcccttctgcc
ccgcctgtcagtttggcatccccaacccatcagctgcggcaacccaacccagcccccatg
aggatgctcagcagcaagctccccaaaggccgccatttgattggcaaccatgttgtatat
gatattgatgttagattgcaaggcgaggtgcagccacaacttgaagtcactcccatcacc
aagtatgtctctgatcctggtcttgtacttggccgtcagattgctgtcaatagaaattac
atctgctatggacttaagccaggagctattcgcatcctcaatatcaatactgccttgaga
tccttgcttcgtggccataaccagaaagtaacagatatggtattctttgctgaggatgtt
caccttctggccagcacatgcattgatggacgggtcttcatacgaaagatcaatgaggag
tcagatgacgaagagaagtctcaaatttttgaaaggattgtacttgcccttcagataata
acagagggagaatcagtccatccacgagtttgttggcatcctcacaaacaagaaattttg
atggttgcaattggaaatcgtatcctaaaaattgataccattaaagttggaaaaggtgaa
ggattttcagcagagaaaccactcaattgttccattgataagttgattgatggagtccag
cttgctggtaagcatgagggtgaagttactgagttgtcaatgtgtcagtggatgaccacc
cgtttagcttcagcttcagcagatggcacggtcaagatttgggaagatcgtaaagcagtg
ccacttgcaatattgagaccacatgatggtaaccctgtaaattctgtggcattcttggct
gctcctcaccgccctgatcatatagttcttatcactggggggccactaaatcaggaagtg
aagatttgggtctctgcaagtgaggagggctggctgttaactagcgattctgaatcatgg
cagtgtagtcagactttgaccttaaagtgttctactgaatctgctgttgaggatgcattc
tttaacgaagttgtagcactgcccaatgctggcttatttctcttggcaaatgccaagaag
aatgctatttatgcaatacacatagaatatgggccttatccagctgctacccgtatggat
tacatagctgagtttacggtgacaatgcctattttgagtctaaccggaactagtgatagt
ttacctaatggagaacatattgttcaggtttactgtgttcaaacacaggctattcagcag
tatgcattggatttgtcacagtgcctaccacctcctctggagaacatggaattggagaaa
acagaatccaatgtttcttgtgtttttggtgcagctacttctgatggttccactatcctg
gaatcatctcatggaagtaaaccaattgaggttcccctagctaaagggactcccatacaa
cctatgttttctagcagttctgagaatgcttccacagcaagccatgctgaaagcttgcct
tcttctgacgttactagcttgcctgatatttctacttcatgtgtagaaaccaaggctagt
cctttgccatcgcataatagtattgaaaacatcaacactgtgtctcctccacttccaccg
agtccacagctatctcgaaaattgtcaggtttccaaagtccatcaaatagcaccgagtct
agtatgcaactcaataatcatgttgttgaccagtctgtccttgactatttgcttgagcat
agaatggatactgcaaaggacaacatggctgatatcccttcttcaggtgacaatttgagg
aagggtgagaaaaacatctcacaaactgacatctcagtggttctggaacctcctgtaatg
tttaaacaccctacccatcttataaccccatcagaaatactatccagatctacctcatct
gctgaggattctcaaattggtcaggtcatgaatgtgggagaggcaaaggtccaggatgtt
gttgtcaacaatgatatagaaagtgtggagttagaggttaaagttgttggagagacaaga
accaatcaaagtaatgactttgacttgcctagagagtcccatgcctatgtaccagagaaa
aaggaaaaatcattccactctcaggcctcggatcttagtattcagatggccagagattgt
tgtgtggaagcttatagtagtgttgggggaattcagaaggctgttgaaagtggtgtatcg
gagatatcagatagaccttctgagaatggtgaagatgaaaagcaagatataagaaaagac
acacctggaaagtttggtgaatcagaaacttctgtggtagtcccacagtcctcagcccca
tctacaaaaggaaaaagacagaaggggaaaaactctcaattgtctggtccatcttctcct
tccccgagtcctttcaactccacagattcatccattgaaccaggttgcagttctggtgcc
caatctagtgatgctgctttatctcaattatctgccatgcaggatatgcttgatcagtta
ctgagcatccagaaagaaatgcagaagcagatgactatgatgatatctgtcccagtttcc
aaagaaggtaaaagactggagacatccttgggccggagtattgagaaagttgttaaggct
aatactgatgctctatgggctcgtttccaagaagaaaacacaaagcatgagaagttagag
cgagatcgtactcagcagttaacaaatttgatcactaattgtgtaaacaaggatttacca
agcactttagataaaactttaaagaaggagatagctgcagtaggacctgctgtagctcgc
gcaattactcccattctggagaaaagcatatcatcagcgattacagagtcattccagaaa
ggggtgggggagaaggctgtgcatcaactagagaaatcagttagttcaaaacttgaaggc
acagtagccaggcaaattcaatcacagtttcaaacttctggcaagcaagctcttcaggat
gcactaagatctagtttggaagctgcaattattcccacatttgagatttcgtgcaaatct
atgtttgatcaaattgattccacatttcagaaagggctcattaatcatctaaatgccact
cagcaacaatttgactccacacattctcacttggccattgctcttagggatgctatcaat
tcagcatcatcaatcactcagaccctgagtggagaattagccgagggccaacacaagctc
ttagctattgcagctgcaggtgcaaactccaaattgggaaatccctctttgagtaatgga
ccactggctggtttacatgagatggctgaggctcctttggatccaacaaaagaattaacc
agattgatagctgagcgcaaattcgaggaagcattcacagcagccctgcagagaagtgat
gtctctatagtttcctggttatgttctcaggttgatccacaggtggttttgtccatggtc
ccattacccttgagccagggagttctgctggcccttttacagcaactggcctgcgatatc
agtaaggaaacttctagaaagctggcatggatgacagacgtggctgttgccataaaccct
gcagatccaatgattgcagtgcacgtgagaccaatatttgatcaagtccatcagatactg
agccatcagaggaacctacccaccacatctgcttcagaatctgccagtatacgccttctt
atgcatgtcataaactcagtgaaaatgagctgtaaatga
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integrated database retrieval system
