Hevea brasiliensis (rubber tree): 110655596
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Entry
110655596 CDS
T05150
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
hbr
Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:
hbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbr03016
]
110655596
Enzymes [BR:
hbr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
110655596
Transfer RNA biogenesis [BR:
hbr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110655596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Flavodoxin_5
Motif
Other DBs
NCBI-GeneID:
110655596
NCBI-ProteinID:
XP_021667680
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MSLSSAYARLTLLALLSASTFYCFYKSRRLKLLKISLNPKDNLNANPISSSNKGKLFFIS
QTGTSKTLAQRLHNLFKLNDLLFDLIDIKDYEPEDLSKETVVIIIASTWEDGKPPSNASF
FANWLADSADDFRVGSLLLSKCKFAVFGVGSTAYGGTFNAVAKDFSRRLRELGANEIVEV
GKGDVDGGELDGIFDQWSGKVLRILKGGSMQNGLVFSNGCTGGESDNENIEDGFESEDDE
NGDVESGIVDLEDIAGKGPSRRSNTVAEVNGKANGQKEMVTPVIRANLEKQGYKIIGSHS
GVKICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKNWQ
WKMDDPLEIVNSAIDQHTKMIKQMKGVPGVTQERLTEGLSPRHCALSLVGEPIMYPEINK
LVDELHRRQISTFLVTNAQFPEKIKMLKPVTQLYVSVDAATKDSLKAIDRPLFGDFWERF
IDSLKSLKEKQQRTVYRLTLVKGWNTEDVDAYFNLFKIGQPDFIEIKGVTYCGSSATSKL
TMENVPWHSDVKAFSEALALKSKGEYEVACEHAHSCCVLLAKTEKFKVNGQWFTWIDYES
FHDLVASGKPFNSMDYMAATPSWAVYGAQEGGFDPDQSRYRKERHHRSSH
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtcctccgcctacgctcgcttaactctcctagctctcctctcagcctccacc
ttctactgcttctacaaatctcgccgtctcaaactcctgaaaatctccctaaaccctaaa
gataatctcaatgctaatcctattagctcttctaataaaggcaagctcttcttcatctct
caaacagggacctccaaaaccctagcgcagcgcctccacaatctcttcaagttaaacgat
ctcttatttgacctcatcgatatcaaagattatgagcctgaggacctttccaaagagacg
gtggtaataattatcgcttccacttgggaagatggaaaaccgccttcaaacgccagtttc
ttcgcgaattggctcgctgacagtgctgatgattttcgagtcggttctttgttgctttct
aagtgcaaattcgcagtttttggagttggaagcacagcttacggcggcactttcaatgcc
gtggctaaagatttttcgaggcgattgagggaattgggcgccaacgagattgttgaggtt
gggaagggtgacgtggatggtggtgaactggatgggatttttgaccaatggagtgggaag
gtgcttaggattttgaagggaggtagcatgcagaatggactggtttttagtaatggatgt
accggtggtgagagcgataacgagaacattgaagatgggtttgaaagtgaagatgacgag
aatggtgatgtggagtcggggatcgtcgaccttgaggatattgcgggtaaagggccttca
aggagatctaatacagtggctgaagttaacgggaaagcgaatggccaaaaagaaatggtg
actccagtgatcagggccaacttagaaaagcagggatacaagattattggttcacacagt
ggtgttaagatttgtcgatggaccaaatcacaacttagagggcgaggaggttgctacaag
cactcattttatggaatagaaagtcacaggtgcatggaggcaactccaagtttggcttgt
gccaacaaatgcgttttttgttggaggcatcacacaaatcctgtgggaaagaactggcag
tggaagatggatgatcccctagaaattgtgaattctgccatagatcagcatacaaagatg
attaagcaaatgaaaggggttccaggtgttacacaggaacgattgactgaaggactctct
ccaaggcattgtgctctgtcacttgttggtgaacctatcatgtatccagagattaataaa
cttgttgatgagctccaccgaaggcagatatcaacttttctggtgacaaatgcgcagttc
cctgaaaagataaaaatgctaaagcctgtcacccagttatatgtcagtgtggatgctgca
acgaaggatagcttgaaggcaattgataggcctctatttggggacttttgggagcgcttt
attgattcgttgaaatctctaaaggagaaacagcagcggactgtttatcgcttgacactg
gtgaaaggttggaatacagaggatgtagatgcttattttaacctctttaaaattggacag
cctgattttatcgaaattaaaggcgttacatattgtggatcgtctgctacatcaaagttg
acaatggagaatgtgccctggcattctgatgtcaaagctttctcagaggccttagctctg
aaaagcaaaggagaatatgaggttgcttgtgagcacgcccactcatgttgtgtcctcttg
gcaaaaactgagaagttcaaggtcaatggccaatggtttacatggatagactatgaaagt
ttccatgatctggttgcttctggaaaacctttcaatagcatggattacatggctgccaca
ccatcctgggcagtttatggagcacaagagggtggatttgatccagatcagtctcgatac
aggaaggagcgacatcataggtcaagccactga
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