Hemicordylus capensis (graceful crag lizard): 128322493
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Entry
128322493 CDS
T08891
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03013
Nucleocytoplasmic transport
hcg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128322493 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
128322493 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128322493 (THOC1)
03041 Spliceosome [BR:
hcg03041
]
128322493 (THOC1)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
128322493 (THOC1)
Spliceosome [BR:
hcg03041
]
Complex C
Other components
EJC/TREX
128322493 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128322493 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
128322493
NCBI-ProteinID:
XP_053099820
LinkDB
All DBs
Position
4:244448427..244490531
Genome browser
AA seq
674 aa
AA seq
DB search
MASSVRAAGRWTGLSGGTMSPPLFSLPEARLRFTSSTRDALNNKTIKPLLSAFSQIPGSE
NEKKFTLDQAFRVVLEEEIINTSSCENVLAIISLAINGVTEGICTASTPFVLLGDVLDCL
PLDQCDRIFTFVEKNVTTWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLA
RLFPLSEKSGLNLQSQFNLENITVFNTNEQESTLGQKHVEEREEGMEVEEGEMGDDEAPT
SCSIPIDYNLYRKFWSLQDYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRK
KLEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYV
LTDEQSLWIEDTTKLVYELLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERP
SDSKPIRPFVRKRPAPEDFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSESREYMPTL
EEFFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLE
NMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENNESPDVQRDKLVTGEQIESFANKLG
GYWKVLAPYLEMKDSDIKQIESDSEDVKMRAKQLLVAWQDQEGIHATLENLITALNKAGL
NDLAESLNDSENNS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatcagttcgcgccgctggtcgctggacgggtctatcaggagggaccatgtcg
ccgccgctcttcagcttgcctgaggcacggctccgtttcacgagttctactcgagatgct
ctcaacaataaaaccatcaagcctttattgagtgccttcagccaaatacctggaagtgaa
aatgaaaaaaagtttaccctggatcaagctttcagagttgtcctagaagaagaaattata
aacacatcttcctgtgaaaatgtcctggctattatttctcttgctattaatggagttaca
gaaggtatctgtactgcatcaaccccttttgtactcctgggagatgttttggattgcctt
cctttggatcagtgtgacagaattttcacctttgtggaaaaaaatgttaccacgtggaaa
tcgaatacattttactcggcaggtaaaaattatttgctgagaatgtgcaatgacctttta
agaagattatccaaatcacaaaatacagtattctgtggaagaattcagctattcctggct
agattattccccctttcagaaaagtcaggactaaacttgcaaagtcaatttaatctggaa
aatatcactgtgtttaataccaatgagcaagaaagcactctaggacaaaagcatgtagag
gagagagaagaagggatggaagtagaagaaggtgaaatgggagatgacgaggctcctacc
agctgttccattccaatagattacaatctgtacagaaaattttggtcacttcaagactac
tttaggaatcctgtgcagtgttatgaaaaggtctcatggaaaacattccttaagtactct
gaagaagtattggctgtcttcaagagctacaagctggatgacactcaggcttcaaggaag
aaattagaggagctgaaaacaggaggagaacacgtttattttgctaaatttctcacaagt
gagaagttaatggatttacagctgagtgacagcaacttccgccgccatatcctcttgcaa
tatttaatattatttcagtatctaaagggacaggtgaaatttaaaagttcaaactacgtt
ctgaccgatgagcagtccctgtggattgaagatactaccaagttagtttacgagcttctt
tcagaaaatcccccagatggagagagattctcaaaaatggtagagcacatactaaacaca
gaagaaaactggaattcatggaaaaatgaaggctgcccaagttttgtgaaggaaagacca
agtgattccaagccaataaggccttttgtgagaaaaagaccagctcctgaagactttctg
gggaaaggacctaataaaaaaattctaatggggaatgaagaattgactcggctctggaat
ttatgccctgataacatggaagcttgtaagtctgagagccgggaatatatgccaacgttg
gaagagttctttgaagaagctattgaacaggcggatcctgaaaacatggttgaaaatgaa
tataaggctgtgaataactctaattatggctggagagcattaaggctgttggcacgcaga
agtcctcacttctttcagccaaccaatcagcaatttaagagcttaccggaataccttgaa
aacatggttatcaaattggctaaagagctacctcctccttctgaagaaattaaaacaggc
gaggatgaagatgaggaagataatgatgctttattaaaggaaaacaacgaaagtcccgat
gttcaacgggacaaacttgtaacaggagaacaaatagagtcatttgctaacaagcttggg
ggatactggaaagttctggctccatacttggaaatgaaagactctgatataaagcaaatt
gaatcagatagtgaagatgtgaagatgagagctaagcagttgcttgttgcttggcaagat
caagaggggattcatgctacactggaaaatctgattactgcattgaacaaagctggatta
aatgacctcgctgaaagcttaaatgacagtgaaaacaatagctaa
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