Hemicordylus capensis (graceful crag lizard): 128324035
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Entry
128324035 CDS
T08891
Symbol
EXOSC4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128324035 (EXOSC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128324035 (EXOSC4)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128324035 (EXOSC4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
128324035 (EXOSC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
128324035
NCBI-ProteinID:
XP_053104103
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Position
4:complement(321301355..321305763)
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AA seq
245 aa
AA seq
DB search
MAGLELLSEQGYRVDGRRAGELRQVRARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRG
SRSKALHDQAAVNCQYSMATFSTGERKRRPHGDRASSEMSLHLKQTFEAAILTQLYPRSQ
IDIYVQILQADGGNYCASVNAATLAVIDAGIPMRDYVCASSVGFIEDTPLADLNYVEEAA
GGPQLALALLPKSDQIALLEMNARLHEDHLERIMEAASKACKDVYVVLDQVVREHLQEVT
VLLGK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctggagctgctgtcggagcagggctaccgcgtggacgggcggcgggccggg
gagctgcgccaggtccgcgcccgcatgggggtcttcgcgcaggccgacggctccgcctac
ctggagcagggcaacaccaaggccctcgccgtcgtctacgggccccacgagatgcggggc
tcccgcagcaaagcgctgcacgaccaggcggcggtgaactgccagtacagcatggccacc
ttcagcaccggcgagcgcaagcggaggccccacggggaccgcgcctccagcgagatgagc
ctccacctgaagcagaccttcgaggccgccatcctgacccagctctaccctcgctcccag
atcgacatctacgtccagatcctgcaggcggacggtgggaactattgtgcctctgtgaac
gcggccacactggcggtcattgacgccggcatccccatgcgggactacgtgtgcgccagc
tctgttggcttcattgaagacacgcccctggctgacctgaactatgtcgaggaggcggct
ggcggcccccagctggccctggcgctgctgcccaagtcggaccagatcgctctgctggag
atgaacgcccggctgcacgaggaccacctggagcgcatcatggaggctgccagcaaggcc
tgcaaggatgtctacgtggtgcttgaccaggtggtgcgggagcatctgcaggaggtcact
gtcttgctgggaaagtga
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