Hemicordylus capensis (graceful crag lizard): 128334124
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Entry
128334124 CDS
T08891
Symbol
NLRC5
Name
(RefSeq) protein NLRC5 isoform X1
KO
K22615
NLR family CARD domain containing 5
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hcg04054
]
128334124 (NLRC5)
Pattern recognition receptors [BR:
hcg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128334124 (NLRC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
Atypical_Card
NLRC4_HD2
LRR_4
LRR_9
LRR_8
AAA_16
NOD2_WH
AAA
AAA_22
nSTAND3
AAA_19
DnaB_C
AAA_30
AAA_7
NB-ARC
TsaE
Motif
Other DBs
NCBI-GeneID:
128334124
NCBI-ProteinID:
XP_053126381
LinkDB
All DBs
Position
9:complement(4618105..4708817)
Genome browser
AA seq
1878 aa
AA seq
DB search
MDDVDLQEAIKSAWPQLVDFLSLTPEWVMEKAKRLLPQMDLNRVEGVANPKEKVSLVLDM
FLSTVDAPILKEFMQSVCMECNLPMDLEIVFMCASGGGLVTQGQEVFTEAAAQLPSTSRP
ERRRPWISPPTNNNCKQSKQQRLDAAERYRQLIITSMLQRYEINKQAEATQAEVQPTAFS
QAFVNLVIRQSKACRIKGKVDKAKEELIALHDGEEHSDATMRLSDLFESVHTDATKVVLL
LGKPGMGKTRLMHKICQQWAEGNLQQFQLIFFFEFRQLNLISRRLTLRELCFDFFHRPED
CPDAVFEHLLENAQHMLLIFDGLDEFVGNIQPLVSSNVFPNCLSPLSISELFASLCHGKL
LCGCTVLVTTRPKMLPAPLLKTITLLAEIWGFDREKVEEYAGYFFHQHSLKQRAIAHLKS
NSELLSLCYIPALCNIVCICLEYLLLQDAGSVQLPQTMTQFYIKMLLIFIGKQQSSSGVS
EEVYLHRQQATIVGLCELAFKGLEERKMLFYADEVPQHVKDFACLYGLLLAFEVKTSSGH
SQAGYTFVHFSLQEFLAALFMLTSKTVDHNCLKQNFFLRSKWMLKKEAKMAFTENCHVFL
SGLSSQGYRQYLSSLAGQNETWIQQRQAMVTEMLGRLASASLTGPRIIELSHCVHEAQNL
ELARHVGKQLNFTFQFRNFRLMPLDVMTLTFVISSSHDLVCLDFVGCPIELDYLDVLASC
ENIKSLSFRSRKCGNEFAAVLSKNLPKIKCLTAFQLAGGNLTIPGLKDLIQAFPNCHQLE
DISLQDNKMKGREMNKIMEIFSTVKKLKKLDLSHNEISATTVLDFARAAAVYPNITKLLI
RKNILIINFTGQFEQDPSFQPSGIKKEEAVPQTRILSLRLQDCHLNFHQAEKLADILRRC
PHLSEMDFSGNQLRDEGCRELVKVLPEMCISGQLNLSNNRLSLKSTFCLLNSMSLCPNIV
KLEASLNSQTAILTLVGNEVGDGLHPRSRAFNDEQFSSDQKQTPKTSRKICLIGNKFHGE
DLRNMCLELRRCSWVSELDLSDNSLGDQGVLKVAELLPDLKMLCSLKLNHNHITLNGVFG
LGKFFSALEQMTSMHLGLGSTQSVHLIFGERISRSLASEDQGKLLDHLHPSKHGRYFCLE
DCMMGAGDVDQLFKILTLSSGLAEINLSRSLLDDQGVERLLKFLPHLDSLKLLGIRSSTF
SAHCVCLLANSFNLCKRICDVEVRSSKNASLHFVESHESQEISCRLTDCGIGQGDIQDLC
IALEKCDRLAELDLSGNHLGNEGLKCLLEHLPRIRASCLMKIDHNGISQEGILHLVNALA
RCHNVAEVHASLSPQEILLIILGREDQSQKILRLAECGFRAEHLLQLSAGLGTCLALSTF
ISTNNGMALRDAEDLCRALRRPTGMLRISIEEPWVKDQSISALQKLAAEVQGNLTKITIR
RDGALFGVEQEFPCQAESVVSRLHHCELEEFHFLPKLIEKCSQLQALSWSQVQLMDAEAA
TLADTLQYSPALKRLELLSCRILPTGTKTLAKGLRQCHLIENIDFSKSELGTDGVDTLVS
ALEGKLHLKSINLSSLDLDNAGVLLLTSRLPTMPLLGRLLLNNNSLGSEACCHLTKALKD
AIHMEEIDLSHNKIDDAGVKEIAAAVPGLQNMKQINLSGNNISSAGGQCFVEALADCKHL
EELRLSANSIGNETLEKLAQVLPCMHQLKVLHLSSCGIDSEGVAHLATALCRCPQMEEIS
LSENSVGSEGIEALAEWLPQSPQLRTIELKCCRIDDRASRPLALGVSRCHFLEEIVLSWN
SLGDQSALELAKVLPGMKRLSVMDLDNNRITECGARSLAEVLPQCRGIRCVRLWRNRIPK
DIEENLRKQEPRMHFSFF
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgtggacctccaggaggccatcaagtctgcttggcctcaactggtggacttc
ctcagcctcactcccgagtgggtgatggagaaagccaagcggcttctcccgcagatggac
ttgaatcgagtcgagggagtggctaaccccaaagagaaggtctccttggtcttggacatg
tttttgagcactgtggatgctcccatcttgaaagagttcatgcaaagcgtctgtatggaa
tgcaaccttcccatggacctggaaatcgtgttcatgtgtgcatcaggaggaggtcttgta
acccaagggcaagaggttttcacagaagccgctgcacagctcccatcaacatcaaggcct
gaaagacgccgtccgtggatcagtcctcccaccaacaacaactgcaaacagtcaaaacag
caacggctagatgctgctgaaagataccggcaactcatcatcacatcaatgcttcaaaga
tatgaaattaataaacaggcagaagcaacacaagcagaagttcagccaacagcattcagc
caagcttttgtcaaccttgtgattcgtcagagcaaagcctgcagaataaagggaaaggtg
gataaagccaaggaagagctaatagctcttcatgatggagaggagcacagtgacgcaacc
atgagattgtccgacctgtttgaaagtgttcacacggatgccaccaaggttgttcttctg
ttgggcaagccagggatggggaaaacaagacttatgcataaaatttgccagcagtgggct
gagggaaacctccagcagttccagttgattttcttctttgaattcaggcaactgaacctg
ataagcagaaggcttactctacgggaactttgctttgatttcttccaccggccggaagat
tgccctgatgcagtatttgagcacctcctagagaatgcccagcacatgctactgatcttt
gatgggctggatgagtttgtggggaacattcagccactggtctcttccaacgtgttcccc
aactgtctcagccctctctccatatctgaactctttgccagtctctgccatggaaaactc
ttgtgtggttgcaccgtgctggtcacaacgcggcctaaaatgctcccggctcctttactg
aaaaccatcacccttctagcagaaatctgggggtttgaccgtgaaaaggttgaggagtat
gctggctattttttccaccagcattccttgaagcaacgagccattgctcatctgaagagt
aacagcgaactactgagcttgtgctacatccccgccttatgcaacattgtctgcatctgc
ctggaatatctgctgcttcaagatgcgggaagcgtccagcttcctcaaaccatgacccag
ttttacatcaagatgcttctgatctttataggcaagcagcagagctcaagtggtgtgagt
gaagaagtctatttgcatcgacagcaagccaccattgtagggctgtgtgagttggccttc
aaaggcctagaggagagaaagatgctcttttatgcagatgaggtcccccaacatgtgaag
gattttgcctgtctctatgggctcttgttggcctttgaggtaaagacgagcagtggccac
tcgcaggccggttataccttcgtccatttcagtttgcaagagttcttggctgcacttttc
atgttgacgagcaaaactgtcgaccacaactgtctcaagcagaacttcttcctgaggtca
aagtggatgttaaagaaggaagcaaagatggcttttactgagaactgccatgttttccta
tcaggcctttcatcccaagggtatcggcaatatcttagctccctagctgggcaaaacgag
acctggattcagcagcggcaggccatggtcactgagatgctggggagactcgcatcggcc
agtttaaccgggcccagaatcattgagctgtcccactgtgtccatgaggcccagaacctt
gagttagcccggcatgttgggaaacagttaaacttcacatttcagtttaggaacttcagg
ctcatgccgctggatgtgatgacactaacctttgtcatcagcagcagccatgatttggta
tgcttggattttgtcggctgtcccattgaactggactatttggatgtcttagccagttgt
gaaaatataaagagcttgagctttaggagcaggaagtgcggaaatgagtttgctgcagtc
ctttccaaaaacctccccaagatcaaatgcctgacagcattccagttagcaggtggaaat
ctcacaatcccaggacttaaagatctgatacaagcttttccaaactgccatcaacttgaa
gacataagcttgcaggacaacaagatgaagggacgagaaatgaacaagatcatggaaata
ttttctactgtaaagaagctgaagaagttggatttaagccacaatgagatttcggcaacc
accgttcttgatttcgccagagcagctgcagtttacccaaacattaccaagctcctgata
aggaagaacattttaataataaatttcactggccaatttgaacaagatccaagctttcag
ccttcaggaataaagaaagaagaagctgttcctcaaaccagaattttaagtttacgattg
caggattgccatctgaattttcaccaagcagagaagctggctgacattctcaggaggtgt
ccccacctttccgaaatggatttctcaggtaaccagcttagagatgaaggatgcagagag
ctggtgaaggtgctgcctgaaatgtgcatttctggacagctgaatttaagcaacaaccgg
ctgtctctgaagagcactttctgcctactgaattcaatgagcctttgtccaaatatagtg
aagcttgaagccagccttaactctcaaactgcaatcttgactcttgtgggcaatgaagtt
ggtgatggcctgcaccccaggagtagagcttttaatgatgagcagttcagcagtgaccaa
aaacagacaccaaagacatcaaggaaaatatgcctgataggaaataaattccatggtgaa
gatctgaggaacatgtgcttggaattgagaagatgcagttgggtatctgagttagacttg
tcggataattctctaggggaccaaggtgtattgaaggtggcggaactcctcccagatctg
aaaatgttgtgttctttaaaactgaatcataatcacataaccctgaatggtgtctttggc
ttggggaaattcttctctgccctggaacagatgacctcgatgcatttaggtttgggaagt
acccagtcagtgcacttaatctttggggaaagaatcagtcgcagcctggccagtgaggac
caagggaagctcttggatcatctacatccctccaaacatggacgctacttttgtctcgag
gactgcatgatgggcgcaggagatgtggaccaactctttaagattctgaccctgagttcc
gggttggcagagatcaatttatctcggagcttgctggatgatcaaggcgttgaacgactc
ctgaagttcctgccccatctagacagtctgaagctcttgggcatcaggagtagcacattt
tcagcacattgtgtttgcctgctggccaactccttcaacctgtgcaagcgaatctgtgat
gtagaagtcagatcaagcaaaaatgcttctctgcattttgtggaaagtcacgaaagtcag
gaaatatcctgcaggctgacagactgtggcataggccagggtgatatccaagacctttgt
attgctcttgagaagtgtgaccgtctagcagaactggatctttctgggaaccatcttggc
aatgaaggactgaagtgcctcttagaacatttgcccaggatcagagcttcctgcctcatg
aaaatcgaccacaacggaatctcacaggagggaattctccaccttgttaacgcccttgcc
aggtgccacaatgtagctgaagtccatgccagcttgagccctcaggagattttgcttatc
atattagggagagaagatcagtctcaaaagatcttgaggctagcggaatgcggcttccgg
gcagagcatctgttgcagctgtctgctgggctgggaacatgccttgccttaagcactttc
atatcaactaacaacggcatggcgctcagagatgcagaggacctgtgcagagccctgagg
agacctacaggcatgctgagaatcagcatagaagagccgtgggtgaaagaccagagtatc
agcgctctgcagaagttggctgccgaagtccagggaaaccttacaaaaatcacgataaga
agagatggagctctctttggagtggagcaggaatttccttgtcaagcggagtctgtggtt
agcaggctacatcattgtgaattagaagaattccactttctgccaaaactcattgagaaa
tgcagccagctccaagcattaagctggtctcaggtacagctcatggatgcagaagcggca
actctcgctgacaccttacagtattctccagcactgaagaggctcgagttgttgagttgc
agaatccttcctactgggacaaagaccttggctaaaggattgcgtcagtgccatctcatc
gagaacattgatttttccaaaagcgagctcggcacagatggggtggatactctagtgagt
gctctcgaaggaaaacttcacctgaagagcataaacctcagctctctggaccttgacaat
gcaggtgttctgctgctgacctcaagactccccacaatgcctcttctgggacgactcctt
ttgaacaacaacagtcttggcagtgaagcttgttgccatcttacaaaagctttgaaggac
gccattcacatggaggaaattgatttaagccacaacaagatagatgatgctggcgtgaag
gaaatagctgcagctgttccggggctacagaacatgaagcaaatcaacctctcgggtaac
aacatcagctctgctggagggcagtgttttgtggaagctctagctgactgcaagcatctg
gaagagctcaggttatctgcaaacagtattggaaatgagactttggaaaaactagctcaa
gttcttccttgcatgcaccagttgaaggtccttcacctgtcctcctgtggcattgactct
gagggagttgcccacttggccacagccctgtgccgatgtccccaaatggaggagatcagt
ttgtcagaaaacagtgttggctctgaaggcatcgaagccctggcggagtggctgccccag
tccccacagctcaggacaattgaactgaagtgctgcagaatcgatgaccgtgcttccaga
cctcttgcccttggtgttagccgctgccatttcctggaagaaattgtcctgtcctggaac
agccttggggaccagagcgccctggaactggccaaagttctcccgggaatgaagaggcta
agcgtgatggatttggacaacaaccggatcacagagtgtggtgccagaagcctggccgag
gtgcttcctcagtgtcgaggaatccggtgtgtgcgattgtggcgcaatcggattcctaag
gacattgaagaaaatctgaggaagcaagaaccccggatgcatttctctttcttttaa
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integrated database retrieval system
