Hemicordylus capensis (graceful crag lizard): 128336254
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Entry
128336254 CDS
T08891
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcg03009
]
128336254 (DDX52)
Enzymes [BR:
hcg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128336254 (DDX52)
Ribosome biogenesis [BR:
hcg03009
]
Eukaryotic type
90S particles
Helicases
128336254 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
HEM4
AAA_30
Motif
Other DBs
NCBI-GeneID:
128336254
NCBI-ProteinID:
XP_053131597
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All DBs
Position
12:complement(16328965..16346874)
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AA seq
635 aa
AA seq
DB search
MEARELFRRLGAGARFDVRRFAGDARRFRVTRTKNKESEASEVLEELDFFADKNKELLNT
PDIGRNKPPKSQRGAREQLGLHTHDETNESVGLQKTKVVKKIKGEAQSIKGRGKKKKTQE
TPLVIPGTEDDGILWMSALEAKLGVPKKKGETKPTAEKLERARQEKLNHFRKKHKIYIQG
SDLPEPIATFEQLGEEYKIHPKIMQNIEAAGFRIPTPIQMQAVPTMLHGRELLACAPTGS
GKTLAFSIPILTHLKQPTNKGFRALILSPTRELASQTHRELVKLSEGTGFRIHMIHKAAE
AAKKFGPKSSQKFDILVTTPNRLIYLLKQDPPAIDLSRAEWLVVDESDKLFEDGKTGFRD
QLATIFLACTSPAVRRALFSATFAHDVEQWCQLHLDNVVSVSIGARNAAAETVDQELVFV
GSEMGKLLAVRELVKKGFTPPVLVFVQSIERAKELFHELIYEGINVDVIHADRTQQQRDD
VVHNFRAGKIWVLICTALLARGIDFKGVNMVINYDFPSSAVEYIHRIGRTGRAGHAGKAL
TFFTEDDKPLLRSIAGVIERAGCPVPDYIKHLHKLQSKQKKKLIKRPLERDHILTSPPFL
LGQAKRRKTASRGKAKKDVQQAKSNSPQAQIPPAN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccgggagctcttccgaagactcggcgccggcgcccgcttcgacgtgaggcgc
ttcgccggggacgcccggcgcttccgggtgacccgaaccaagaacaaggaatccgaagca
tcggaggttttggaggagctcgacttttttgctgacaaaaacaaagagctgctaaatact
cctgatataggaagaaacaagccccccaaatcccaaagaggagccagagagcagctcgga
ttgcacactcatgatgaaacaaatgagtctgtggggctacagaagacaaaggttgtaaaa
aagataaaaggagaagctcagagcatcaaagggaggggaaaaaagaaaaagactcaagaa
acgcctctggtaattcctggtacagaagatgacgggatattgtggatgtctgctctggaa
gcgaagctcggtgttccaaaaaagaagggtgagacgaagcccactgcagagaaactggaa
cgagccagacaagaaaagctcaaccatttccggaagaagcacaagatctacattcaggga
tctgatcttccagaaccaattgctacctttgagcaactgggagaagagtacaaaatccac
ccaaagataatgcagaatattgaagcggcgggattccggattcccaccccaattcagatg
caggctgttccgacgatgctccacggtcgtgagcttctggcctgtgctcccacgggttct
gggaagacgttggctttcagcatccccatcttaacacacctgaaacaaccgaccaacaaa
ggtttcagagctcttatcctatctcccacacgggagctggccagccagacgcacagagag
ctggttaagctgtcagagggcactggctttaggatacatatgatccacaaggctgccgag
gcggccaagaagttcgggccaaaatcctcgcagaaattcgatatactggtaacgacccca
aaccgacttatttacctgctgaaacaagaccctccagcaatcgatttaagcagggccgag
tggctggttgttgacgagtcggacaagttgtttgaagacgggaagacgggcttccgagac
cagctggccaccatcttcctggcgtgcacgtcccccgcggtccggagagccctgttcagc
gccacgtttgcccacgacgtcgagcagtggtgtcagctccacctggacaatgtcgtttcc
gtctcgatcggagccaggaatgcggccgctgagacggtggaccaagagctggtgtttgtt
ggatcggagatggggaagctgctggccgtgcgagagctcgtgaaaaagggttttacgcct
cccgtcttggttttcgtccagtccatcgagcgggctaaagaacttttccacgagctcatc
tatgaagggatcaacgtggacgtcatccacgcagaccggacccaacagcagagagacgac
gtagtccacaatttcagagcagggaagatttgggtcctcatctgcaccgccctgctggcg
cgaggaatcgacttcaaaggggtgaacatggtgatcaactacgacttcccgagcagcgcc
gtggaatacatccaccggatcggtcgcacgggcagagcaggacacgcagggaaagccctt
actttcttcaccgaagacgacaagccattactgcgaagcatcgccggtgtgattgagcga
gccggttgtcctgtgccggactacatcaaacacttgcacaagctgcaaagcaagcagaag
aagaagctgatcaagaggcccctggagagggaccacatcctgacctcgcctccgttctta
ctgggccaggccaagaggagaaagacggcctctcggggaaaggcaaagaaggatgttcag
caagctaaaagtaacagtccccaggcacagatccctccggcaaattga
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