Hemicordylus capensis (graceful crag lizard): 128340785
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Entry
128340785 CDS
T08891
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hcg01002
]
128340785 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcg04121
]
128340785 (USP47)
Enzymes [BR:
hcg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128340785 (USP47)
Peptidases and inhibitors [BR:
hcg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128340785 (USP47)
Ubiquitin system [BR:
hcg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128340785 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Ubiquitin_2
Sad1_UNC
CP2
Motif
Other DBs
NCBI-GeneID:
128340785
NCBI-ProteinID:
XP_053142412
LinkDB
All DBs
Position
1:complement(115891367..115998842)
Genome browser
AA seq
1373 aa
AA seq
DB search
MVPSEENQLVPKEDMLWRCRQSIFDEMKKKFAQIESAADEPRVLCIIQDITNSTTVNERI
TLNLPASTPVKRLFEDVATKAGYVNGTFDLFWGKGVNVANTALLDQSNDKSIVDAGFEPG
KRNLLLLTDKDGKKPQIALEESSGADDCNQDQFIGPLPREGSVGCANDYVSQNYSYSSIL
NKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEDPVTSIPYQLQRLFV
LLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLY
QGKLKDYVRCLECGYESWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPNQ
YFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMGSFI
DIEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSTAERISKVGNE
KNSLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITHEDIKKTYGGTSG
SRGYYSSAFASSTNAYMLIYRLKDPTRNAKFLEVNEYPEHIKKLVQKEKELEEQEKRQRE
IERNTCKIKLFCMHPAKQIMMENKLEVHKDRTLKEAVERAYKIMDLEEAVPLECCRLIKY
DEFHDYLERSYEGEEDTPMGILLGGVKSTYMFDLLLETRRPDQVFQCYKPGEVMVKVHVV
DLKQETVASPISVRAYLNQTVTEFKHLISKAIHLPAETMRVVLERCYNDLRLLNVANKTL
KAEGFFRSNKVFVESSESQDRQLAFTDSHLWKLLDRHANTIKLYVSLPEQSPGSQFRRTV
FQKASGDSSNLDELCGRVKGPLSNIKSVEAILEESTEKLKTLSLQQQQQEGDNGDSSKST
EASDFENIESPSNEVDSSAENRELENQIQVSDPENYQSEERSDSDVNNDRSTSSVDSDIL
SSSHSSDTLCNVDNAPMPLANGLDSHSITSSRRSKANEGRKETWDTAEEDSGTDSEYDES
GKSRGETQYMYFKAEPYIAEEGSGEGQKWLLIHVDKRITLSAFKQHLEPFVGVPSSQFKV
FRVYASNQEFESVRLNETLSTFSDENKITIRLGRALKKGEYRVKVYQLLVNDPEPCKFLL
DSVFAKGMTVRQSKEELLTQLREQCGLDLTVDRFRLRKKTWKNPGTVFLDYHVYEEDINI
SSNWEVFLEILDGPEKMKSMSQLAVLSRKWRPSKMKLDSFQEVVLESSSVDELKEKLCEI
SGIPVENIEFAKGRGTFPCEISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKNE
QMVELTEEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccagcgaggagaaccagctggtccccaaagaggatatgctttggagatgcaga
caaagtatctttgatgaaatgaagaagaaatttgcacagattgaaagtgctgctgatgaa
cctagagtgctttgtataatacaagatattactaattctacgacggtgaatgaacgcatc
actttgaacttgcctgcctccactccagtaaaaagactgtttgaggatgtggccactaaa
gcgggctatgttaatggaacatttgatttattttgggggaaaggagtcaatgttgccaat
acggcactgttggatcaatctaatgataaatctattgttgatgctggttttgagcctggg
aaaaggaatcttctgcttctgacagataaagatgggaaaaaacctcaaatagctttggag
gagtccagtggagcagacgactgcaatcaagatcaattcataggccctcttccacgagaa
ggttcagttggttgtgccaatgattatgtcagccagaactactcttattcatcaattctc
aataaatcagaaacggggtatgtgggcctagtaaatcaagcaatgacctgctatttgaac
agtcttctacaaacccttttcatgactcctgaatttagaaatgctttatacaaatgggaa
tttgaagaatctgaggatccagtgacgagcatcccttatcagcttcaaaggctatttgtt
ttattacagaccagcaaaaagagagcaattgaaacaacagatgttacacgaagttttgga
tgggatagtagtgaggcttggcaacagcacgatgtgcaggaactttgtagagtcatgttt
gatgctttggaacaaaaatggaaacaaacggaacaggccgatctcataaaccagctctat
caaggcaaactgaaggactatgtaagatgtctggaatgtggctatgagagttggagaatt
gacacgtacctggacattccactggtcattcggccttatggctccaaccaggcttttgcg
agtgtggaggaagctctacatgcatttattcagcctgagatacttgatggccccaatcag
tatttctgtgaacgttgtaagaagaaatgtgatgcaagaaagggtttgcggtttttgcat
tttccttatctgctgaccctgcagctcaagagatttgactttgattataccactatgcac
agaataaaacttaatgaccgtatgacatttcctgaagagctagatatgggttcattcatt
gatattgaagatgagaagtctcctcaaacagagagttgcactgacagtggagcagagaat
gaaggcagttgtcacagtgatcagatgagcaatgatttctccaatgatgatggagttgat
gaaggaatatgtcttgaaagcaacagtactgctgaaaggatttcaaaagttggcaatgaa
aagaattcattgttatatgaactattttctgttatggtccattcgggaagtgccgctggt
ggccattattatgcctgtataaagtcctttagtgatgaccagtggtacagcttcaatgat
caacatgttagcaagataactcatgaagacattaaaaaaacttatggtggaacatctgga
agcagagggtattattccagtgcttttgcaagctctacaaacgcatatatgcttatatat
agattgaaggatccaacaagaaatgcaaagttcctagaagtgaatgaatatccagaacac
attaaaaagttggtacaaaaagaaaaagagttggaagaacaagaaaagagacagcgtgaa
atagagcgcaatacttgcaagataaaattattctgtatgcatcctgcaaaacaaataatg
atggaaaataaactagaggttcacaaggacaggactctgaaggaagctgtagagagagct
tataagataatggatttagaagaggcagttcctctggagtgctgtcgcctcattaagtat
gatgaattccatgattacttggagcgatcatatgaaggagaagaggacactccaatgggt
atcttgcttggaggtgtcaaatcaacatatatgtttgatctcctcctggaaacaaggcga
cctgaccaggtttttcagtgttataaacctggtgaagtcatggtaaaagttcatgtcgtt
gatctaaagcaagaaacagtggcttctcccattagtgtccgtgcatatttgaatcagaca
gttacagaattcaagcatctaatttcaaaggctatacatttgcctgctgaaacgatgaga
gttgtgttggaacgttgctacaatgatttgcgtctcctcaatgtggctaacaagacactg
aaagctgaaggcttttttaggagcaataaagtgtttgtagaaagctcagagtctcaagat
cgacagctggcatttacagattcacatttatggaaactcctggatcgccatgcaaataca
attaaactgtatgtttcattaccagaacaatcgcctggatcacagtttagaaggacagtt
tttcagaaagccagtggagattccagcaatttagatgaactctgtggaagagtgaaagga
cctttaagtaatattaaatcagtagaagctatcctagaagagagcactgaaaaacttaaa
actttgtctctacagcaacagcagcaagaaggggataatggagacagcagtaagagtacg
gaggcaagtgactttgaaaacattgaatcaccttcaaatgaagttgattcatcagcagaa
aatagagaacttgaaaatcaaattcaagtttctgatccagaaaactaccagtcagaggag
cggtcagattctgatgtgaataatgacaggagtacaagttcggtggacagtgatattctt
agttccagccacagtagtgacactttgtgcaatgtagacaatgcccctatgcccttggct
aatggactggactctcacagcataacgagcagtaggagatccaaagccaatgaagggagg
aaggaaacctgggacacagctgaagaggattctggaacagacagtgaatatgatgaaagt
ggcaagagccggggagaaactcaatatatgtatttcaaggcagagccctacattgcagaa
gaaggttcaggagaaggacaaaagtggttgttgattcatgttgataagagaattacccta
tctgccttcaagcaacacttggagccatttgttggtgttccgtcttctcagtttaaggtt
tttcgagtttatgccagcaatcaagaatttgagagtgttcgactgaatgagaccctttcg
accttctcagatgagaacaagataacaattaggcttggaagagcactgaagaaaggagaa
tacagggtcaaggtttatcaactcttggtgaatgatccagagccttgcaagtttcttcta
gattctgtttttgctaaaggaatgactgttcgacagtcaaaagaagaactacttactcag
ctcagggagcaatgtgggctggatctgactgttgataggtttcgtctaagaaagaagacc
tggaaaaatccaggcactgtgtttctggattatcatgtttatgaagaagatattaatatt
tcaagtaactgggaagtcttcctggaaatacttgatggaccagaaaagatgaaatctatg
tcacagcttgctgttctgtcaagaaaatggagaccatcgaagatgaagctagattctttt
caggaagtagttttggagagcagcagtgttgatgagttaaaagaaaagctttgtgaaata
agtggaatccctgtagaaaatattgagtttgcaaagggcagaggaacatttccatgtgag
atctcggttctagagatacatcaggatttggactggaatcctaaggtttctacactgaat
gtatggccactctacatttgtgatgatggagcagtgatattttatagggataaaaatgaa
caaatggtggaactgacagaagaacagagaaatgagttaatgaaaaaagaaagcagcaga
cttcagaaaactggacaccgtgtgacctactcccctcgtaaagaaaaagcactaaaaata
tatctagacggagcgccaaataaagatttgactcaagactga
DBGET
integrated database retrieval system
