Hemicordylus capensis (graceful crag lizard): 128342933
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Entry
128342933 CDS
T08891
Symbol
TMF1
Name
(RefSeq) TATA element modulatory factor isoform X1
KO
K20286
TATA element modulatory factor
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcg04131
]
128342933 (TMF1)
Membrane trafficking [BR:
hcg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
128342933 (TMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
SlyX
Motif
Other DBs
NCBI-GeneID:
128342933
NCBI-ProteinID:
XP_053147105
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All DBs
Position
2:complement(278820817..278877369)
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AA seq
1108 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQAEEEEEGEGSPQVGSAPSRPGEAGTNSLT
TGGWDTSTWGSNLDIEPQTQPISSPTAITKPVRRTMVDESENFFSAFLSPTDVQSIQQNS
VVSKPPTKSQRPKEEVKNTLQDSLPPDLPETEAKDFSVIASVGLETVDDSQETLEENNTE
EKPDENKTKDADQKASVQHLAVADDAVVKLSSRSDGPGHVPDISAQPLSTEAKNGGLDTK
ERKSEDRQSNTPSPPISTFSSGTSTTSDIEVLDHESVISESSVSSRQEAADSKASLHLMQ
TSFQLLSSSACAEYNRLDDFQKLTESCCSSDAFERIDSFSVQSLDSRSVSEINSDDELSG
RGCVSASVNISPPIPKSDEAEPIKIKYDQIVNEALALPTEEMEMEESGRSATPVNPEQPD
VLAVPVQTDEGQMVKEEMMVLQFSGETSSSVKCEKEELCKIIDSLTEKLEKRENQLLSVS
KEKACLEEACDNLKDEIFRMKEESSSISSLKEEFAQRIADAEKKVQLACKERDATKKEVK
TLKEELATRLNSNETAELLKEKEEQIKGLMEEGEKLSKQQLQNSNIIKKLRAKDKEKENV
NTKQSKKIKELEEELQHLKQVLDGKEEVEKHHRENIKQLNSVVERQEKDLGRLQVDLEEL
EERNRSVQAALDSAYKELTDLHKANATKESKAQEAALSHEMKAKEELGLALERAQEEARQ
QQEALAIQVADLRLALQRAEQQTARKEDYFRQEIGELQQRLQEAEARNQELSQSVTTATR
PLLRQIENLQATLAAQTSSWEKLEKNLSDRLGESQTALAAQTERERAATEELLSNKIQLS
STESQNSLLRQENNRLQAQLETEKTRLKKLENENNRYEVEMENLKEEYVKTIEEAKKEKM
LLATQLEMEKMKVEQEKKKAIFVQETVREKERKLFTSSTMETVSSTPTLSRSSSISGVDM
AGLQGSFISQDDPHDHSFGSMSTSGSNLYDAVRMGAGSSIIENLQSQLKLRDGEISHLQL
EIGNLERTRSVMAEELVKLTNQNDDLEEKVKEIPKLRAQLRDLDQRYNTILQMYGEKAEE
AEELRLDLEDVKNMYKTQIDELLKQRHS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcgtcgcagctctcgagcttcgccaagcaggcgctctcgcaggcg
cagaagtccatcgaccgagtgctggacatccaggccgaggaggaagaggagggcgagggg
agcccccaagtcggatctgccccttcccggcccggagaggctggaacaaattctcttacg
actggaggatgggatacttctacctggggatcaaatttagatatcgaacctcaaactcaa
ccaatatcatctcctacagcaatcaccaagccagtcaggaggactatggtagatgaatca
gaaaacttcttcagtgcctttctctctccaacggatgttcagagcatacagcaaaattca
gtggtgtctaagccacccaccaaatcgcagcgacccaaagaagaggtaaaaaacacatta
caggattctctgcctcctgacctgccagaaacagaagcaaaagacttctctgtaattgca
tcagtgggactggaaactgttgatgattcccaggaaacgttagaagaaaataatactgaa
gaaaagcctgatgaaaacaaaactaaagatgctgatcaaaaggcatctgttcagcatctc
gctgtagcagatgatgctgttgtgaaattgagttcaagaagtgatggacctggacatgtg
cctgacatctctgcgcagcctctgtctacagaggcaaagaatggaggcttggatactaaa
gagcgtaaaagtgaggacaggcagagcaatacaccttcacctccaatcagcactttctcc
tcagggacatccacaactagtgatattgaagttttggaccatgaaagtgtaataagcgag
agttcagtaagttctaggcaagaggctgctgattcaaaagccagtcttcatttgatgcaa
acttccttccagcttctatcgtcatctgcctgcgcagaatataaccgtctagatgacttt
cagaaattgactgagagttgctgctcctcagatgcttttgaaaggatagactcattcagt
gtgcagtctttagacagccgtagtgtaagtgaaataaactcagatgatgaattgtcaggt
aggggatgtgtttcggcatctgtcaacatcagccctccaataccaaagagtgatgaggct
gaacctataaaaataaagtatgatcaaatcgtaaatgaggctcttgctctacccacagaa
gaaatggaaatggaggaaagtgggcgaagtgcaacccctgttaaccctgagcagccagat
gttctggctgttcctgtgcaaaccgatgaagggcagatggtgaaagaggagatgatggta
cttcagttcagtggtgaaacatcgtccagtgtaaagtgtgaaaaagaggaactttgcaag
atcattgattcattgacggagaaactggagaagagggaaaatcagctgttgagtgttagt
aaagagaaggcatgcctagaagaagcttgtgataaccttaaagatgaaatcttccgaatg
aaagaagagagcagtagcatttcatctcttaaagaggagtttgctcagcgaatagcagac
gcggagaaaaaggttcaattagcatgcaaagagagagatgcaacaaaaaaggaagtaaaa
actctcaaagaagagctagcaactagattgaacagcaatgaaactgctgagctactaaaa
gagaaagaagaacagattaaaggattaatggaagaaggagaaaagctttcaaaacagcag
ttgcaaaactctaacatcattaagaaactaagagcaaaggataaggaaaaggaaaatgtt
aatacaaagcagagtaaaaaaattaaggagttagaagaagaattacagcatctgaaacag
gtattagatggcaaagaggaggttgaaaagcaccatcgagaaaacattaagcagctaaat
agtgtggttgaacggcaagagaaggatcttggcagactccaggtggatttggaggaactt
gaagagaggaatcgaagtgtccaagcagcccttgatagtgcatataaggagcttacagat
cttcacaaagctaacgctacaaaagagagcaaggcacaagaagcagcattgagccatgaa
atgaaagcaaaggaagaactgggtttagctctcgagagagcccaagaagaggctcgtcag
caacaagaggctttagcaattcaggtggcagacttgagactggccctgcaacgtgcagaa
caacaaacagctagaaaagaggattatttccgtcaggaaattggtgaactgcaacagaga
ttgcaagaagcagaggcccgcaaccaagaattgagtcaaagtgttacaactgccacaagg
cccttgctccggcagatagaaaaccttcaagcaacccttgcagcacagacctcttcatgg
gagaagttggagaagaacctttctgatagacttggggaatctcaaactgccctggcagct
cagactgaaagagaacgtgctgctacagaagaacttctttccaataaaattcagctatct
tccaccgagtcgcaaaatagtctgctaagacaagaaaataatcgccttcaagctcaacta
gagacagagaaaaccagactcaagaaactggaaaatgaaaacaatcggtatgaagttgaa
atggaaaaccttaaagaagagtatgtgaaaacaattgaagaggcaaagaaagaaaagatg
ctgctggctactcagttagaaatggagaagatgaaagttgaacaagaaaaaaagaaagcc
atttttgttcaagaaacagtaagagaaaaggaacgtaaattattcacttcatcgacaatg
gaaactgtgtcgagcactccaactttgtcacgctcgagttccataagtggggttgatatg
gcagggctccagggatccttcatatcccaggatgaccctcatgatcattccttcggttca
atgtctacaagtgggagcaatctgtatgatgcagtgcgaatgggagcaggttcaagcatt
attgaaaacctgcagtcacaattaaaattgcgggatggagagatttctcatttacagttg
gaaattggaaaccttgaaagaactcggtcagtaatggcagaagagctggtaaagttaaca
aatcaaaatgatgacttggaagaaaaggtaaaggagatacccaagctacgtgcacagcta
cgggatttggatcagagatacaataccatccttcagatgtatggtgagaaagcagaagag
gcagaagaattgagactggaccttgaagatgtgaagaacatgtacaagactcagattgat
gaacttctaaagcaaaggcatagttaa
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