Hemicordylus capensis (graceful crag lizard): 128344677
Help
Entry
128344677 CDS
T08891
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128344677 (HELZ)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
128344677 (HELZ)
3'-5' decay
Other 3'-5' decay factors
128344677 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
AAA_30
ResIII
UvrD-helicase
PhoH
PAM2
zf_CCCH_4
AAA_22
zf-CCCH_4
Mov-10_helical
AAA_16
AAA_7
Bac_DnaA
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
128344677
NCBI-ProteinID:
XP_053151332
LinkDB
All DBs
Position
2:complement(412565943..412802832)
Genome browser
AA seq
1945 aa
AA seq
DB search
MADRRPEKSCEQACESLRQQDYEVAVKHCTEALFSLSQYPPTHFPEACQAEIDRIRIESL
LYRIASSLQLKNYGKADEDCRHVLGEGLAKEDDTFRAVLCCMHLKGKLQIVSNLLSKSLM
GESLNGMVTKDLTRLKTLLVETEAAAAGKVPSVYHVEDLEEGSQDGWQFRPPPRGVTSSE
EYTLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCLGTYMESL
IEKWMNSLSPEKVLSEFLDGVRVEHNPELSVTVTTKKSQQMWTFALTCKPARMLYRVALL
YDAHRPHFGITAISAGDSTTQVSQEVPENCQEWIGGKMAQNGIDHSVYKISIAFITEIFG
TFRQTVVFDFGTEPVLMQRVMIDAASTEDLEYLMNARQQLLTTAKRWDSTSKTIVEFEPN
ETTELEKSLLIRYQIPLSADQLFTQSVLDKSLTKCNYQSRLHDLLYIEEIAQYKEVSKFN
IKVQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPV
TKEKSVLTQGTKEKVYEAAIEEKTKEYIFLRISRECCEELCLRADCEMQVELQFQLNRLP
LCEMHYALDRIKDNSVLFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSI
QLPPVLIIGPYGTGKTFTLAQAVKHILQQHDTSRILICTHSNSAADLYIKDYLHPYVEAG
NPQARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYL
CQLDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARER
NLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFY
PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYAD
QVFRIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEHLLED
STEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHDNESLH
GITFDQIKAQLEALELKKTYVLNPLAPEFIPRALRQQHSSNTNKSQQSPPKVKSHHNQND
HFQTDGIVQPNPSVLIGNPIRPYTPPPPPPPPPPPPGPHPNLGKSPSPVQRIDPHTGTSI
LYVPAVYGGNMVMSVPLPVPWTGYQSRFAVDPRIITHQAAMAYNVNLLQAHGRGSPIPYG
LGHHSPVSIGQQQLQLSEKEQLEQNRNSKNEPGAGPEMNKIRTPEKKSMESKQVDLEANS
QNRSPESRSSSAYPNSKFHRKENLNPRQLNLHLTPPHSQYAVPNRHFQHLSQIPRQPYPV
QQQQSLLSQQQNHLPEQQNQMHPQQSQIVQQHNHLNQQPQQPPSQLSPAYQTGPNQSFFK
NPVPHRPHSPSVDTVISEPHPPSLLQEVNNPLRPIAQHNPMMPPHLNHFIEENPPGMSVG
EPMDRIHGNLALETLRQQQARLQQWNEHNAYLSQGNIPYSHHHHPHLSHLAQQPVGLHQQ
PIRANWKLANNIEDETEPTYSRFQDLLRELSHRDQNESRDLVEMPPPQSRLLQYRQVQPR
SPPALPSPSCNSNHSGHFPNFSDNRDIEVSNNPAFQQHLPQMYNPPFSMPSEHITPPSLK
YLQPDGSWTYANLHQSHLMGQGFHYGIPPLPHRSQQNPFIQIQNQHPVGQEPFHPLTSRA
VSASSLHSLEEYEPRGPGRPLYQRRISSSSAQACSEDANTPQDSLGQCKELQDHSNPSSF
NYSSPELWVNSTSSTPYQNIPCNGSNRAVPPRELLVPSKTVKPPEEQMKVENIQLSNSFN
YNVLQHLGQFPPLMPNKQIVESNSNSQQSAGVNKPAMSYASALRAPPKPKAPPEQAKKNS
DPLSLFQELSLGSSSGSNGFYSYFK
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaagtcatgtgaacaagcatgtgaatcactcagacagcag
gattacgaagtggcggtgaagcactgcacggaggccctcttttccctcagccagtaccct
cccactcacttcccagaagcatgtcaggctgaaatcgaccgcatcagaattgagagtctg
ctctatagaattgcttcttctttacaacttaaaaactatgggaaggcagatgaagactgt
aggcatgtgctgggagagggactggccaaggaagatgacactttccgtgctgtgctttgc
tgcatgcatcttaaagggaaactgcagattgtatctaaccttctttctaaatcactgatg
ggtgaatcattgaacgggatggtaacaaaagatctgacaagattgaaaacactgcttgtt
gaaacagaggcagcagcagcgggtaaagtaccctcagtataccatgtagaagatttggaa
gaaggatctcaggatggctggcagtttcgccccccacccaggggagtcacaagtagtgag
gagtacacattatgcaaaagatttttagagcaaggaatctgcaggtatggtgcacagtgt
acttcagcacattcccaggaagagctaacagaatggcagaaacgatatgcatcccgtttg
ataaggttaaaacagcagaaggaaaacaaacaatgtttgggaacttacatggaatccttg
attgaaaaatggatgaattcgttatctcctgagaaagtgcttagtgaattcttagatggc
gtgagagttgaacataatcctgagctatcagttactgtcaccaccaaaaaatcacaacag
atgtggacgtttgctctcacatgtaagcctgcaaggatgctctatcgcgtggcactactt
tatgatgcccatcgtcctcatttcggtatcacggcaatatctgctggagatagcaccacc
caggtatcgcaagaggtccctgaaaactgtcaggaatggataggaggaaagatggctcag
aatggaatagatcactctgtgtacaaaatcagtatagcctttatcacagaaatctttggg
acatttcgccaaactgtggtatttgactttgggactgaaccagttttgatgcaacgagtg
atgattgatgctgcttcaacagaagatcttgaatacctgatgaatgcacgacaacaacta
ttaactacagccaagcgttgggattccacttctaagactattgtagaatttgagccaaat
gagactactgaattggagaagagccttttgattagataccaaattcctctatctgctgat
cagctatttacacagtctgtcttggataaatcactgacaaagtgtaattaccagtcacga
ttgcatgatctcctttatattgaagaaatagcacaatataaagaagtcagcaagttcaac
ataaaagtgcaattgcagattgtagcaagcttcatgctcaccggtgtttctggaggtgca
aagtatgcccaaaacggacaactctttggacgttttaagctcactgaaacactttctgaa
gatactttggcaggaagactagtgatgaccaaagtcaatgctgtttatttattgccagtc
actaaagagaagtcggtactgacccagggaaccaaagagaaggtgtatgaagcagctatt
gaggaaaaaacaaaggagtatatatttttgagaatatccagggaatgctgtgaagaactt
tgtcttcgagcagactgtgaaatgcaggttgaacttcagtttcagttaaaccgcttaccc
ctgtgtgaaatgcattatgccttggacaggatcaaggacaacagtgttctctttccagat
gtcagcatgactcctacaataccttggagtcccaacagacagtgggatgagcagttggat
cctaggctcaatgcaaagcagaaagaggctgtcctggctatcacaactccactctcaata
caattgcctcctgttcttatcatcggtccctatgggacaggcaaaaccttcactttggct
caggcagtcaagcacatactccaacagcacgatactagcaggattctcatttgcacccat
tctaatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggc
aatccccaggcaagacctctcagggtgtatttcagaaatcgctgggtgaagaccgtccac
ccagttgtgcatcaatactgtttgatttcaagcacacattccacctttcagatgccccag
aaagaagatatccttaaacagcgagtagtagttgttactctgaatacttcacaatattta
tgtcaattggatcttgaaccgggtttttttacacatattctgttagatgaagctgcacag
gcaatggagtgcgagactatcatgcctctagcactagcaaataaaaatacaagaattgtc
ttggctggagaccatatgcaactcagtccttttgtctacagtgaatttgccagagagaga
aatcttcatgtctcgctgcttgatcgactctatgaacactaccctgcagaatttccgtgc
aggattttgctgtgtgagaactatcgctcccatgaagctatcatcaattatacatctgaa
cttttctatgagggcaaattgatggcaagtggaaaacaaccagcacacaaagatttctac
cctctgactttcttcacagcacgaggagaagatgtgcaagaaaaaaacagtaccgctttt
tacaacaatgcagaggtgtttgaagtagtggaacgtgttgaagaactgaggagaaagtgg
ccagttgcctgggggaaattagatgacggcagcataggtgttgtaacaccatatgctgat
caagtgttccgaattcgggcagagcttcggaaaaaaagattgtctgatgtcagtgttgaa
agagtgctaaatgttcagggaaagcagtttcgagtgctctttcttagcacagtgcgaaca
cggcacacgtgcaaacacaagcaaacaccaatcaaacggaaggagcatttattggaagat
tcaacggaagatttggattatggttttttgtccaattacaagcttctcaacacagccatc
acgagagcacagtccttagtagctgtggtgggagaccctattgcgttatgttccattgga
agatgcaggaaattttgggaaaggtttattgccttgtgtcatgataatgagagtcttcat
ggtatcacatttgatcaaatcaaggctcagttggaagctctggaattgaagaaaacctat
gtattgaatccgctggctccagagtttatcccacgggctctgcgacagcagcattcatca
aataccaacaaatcacagcaatcgccaccaaaggtgaaaagccatcataatcagaatgac
cattttcaaacagatggaattgttcagcccaatccttctgttttaattggaaatcctata
agaccatatactccaccaccgccaccaccccctccccctccccctcccggacctcatccc
aaccttgggaaatctcctagtcctgttcaaaggatagatcctcacactgggacaagcatt
ctttatgtacctgctgtttatggaggaaatatggtcatgtctgtgcctttgccagtacca
tggacagggtatcagagcaggtttgcagttgaccctcgaatcattactcatcaagcagct
atggcatacaatgtgaacctgttacaagcacatggacgtgggtctcctataccctatggt
cttggacaccattcaccagttagtataggacagcagcagcttcaactttcagaaaaagag
caacttgaacaaaatcggaacagcaaaaatgaacctggtgctggacctgaaatgaataaa
attcggacacctgaaaaaaagtctatggaatccaaacaggttgacttagaagcaaattcc
caaaatagaagtccggaatcacgttccagcagtgcttatcctaattctaaatttcaccgc
aaagaaaatcttaaccccaggcagctgaatcttcacctcacccctccccattctcagtat
gctgttcctaatcgccatttccagcacctgtcccagattccaaggcagccataccccgta
caacagcagcaaagcctattaagtcaacaacaaaatcatttgcctgaacaacaaaaccaa
atgcacccacaacaaagccagatagtccagcaacataatcatttaaatcagcagccacaa
cagccaccttcacagctttcccctgcctatcaaacaggccccaaccagtcattcttcaaa
aacccagttccacacagacctcattcccctagcgtcgatactgtcatttcagagccgcat
cctccatctctgttacaagaagttaataacccccttagacccattgcccagcacaaccca
atgatgccaccccacttgaaccacttcattgaagaaaatcctccaggaatgtctgtaggg
gaaccaatggatcgtattcatggaaatctggctttggaaaccttaagacaacagcaagca
agactacagcagtggaatgagcataatgcctatctcagtcagggcaatattccttattct
catcatcatcaccctcatttatcccaccttgcacagcagccagttggattgcatcagcag
ccaattagggcaaactggaaacttgccaacaatatagaagatgaaactgagccaacatat
tcaaggttccaggatttgctccgagaactgtcacatcgtgatcagaatgaaagcagggac
ctcgttgaaatgccaccacctcagtcgagacttttgcaatatagacaagtgcagcccaga
agcccaccagcactcccctctccttcatgcaactcaaaccacagcggccactttcctaac
ttctccgacaacagagacattgaagtgtccaacaacccagcatttcagcagcatttgcct
caaatgtacaatccccccttttcaatgccgtctgaacacataaccccaccttctttgaaa
tatctgcaacctgatgggtcatggacctatgctaatcttcaccagagtcatctaatgggg
caaggctttcattacggtatacctccattgcctcatagatcgcagcaaaacccttttata
caaatacagaatcagcacccagttggtcaggaaccatttcaccccctcacttcacgagca
gtatctgcttcttcgctgcacagcttagaagagtatgaaccaagaggaccaggcaggccg
ttgtaccaaagaagaatttcatctagttcagcccaggcttgttctgaagatgcaaacact
cctcaagatagccttggacagtgtaaagagcttcaggaccatagtaacccatcctctttc
aattattcatcccctgaattatgggtaaactccacctcatcaaccccatatcagaacatt
ccatgcaatggatccaatagagcagttccacctagagaactgttagttccatcgaagact
gtcaaacccccagaggaacagatgaaagttgaaaacatccagttgtccaactcttttaat
tacaatgtgctccaacatcttggccagttcccacccctcatgccgaacaagcagattgtt
gaatccaatagcaacagccagcagagtgctggtgtgaataagcctgccatgtcctacgca
agtgctctgagggctccaccaaagcccaaagcccctcctgagcaggcaaaaaagaatagt
gatcctttgtctttgtttcaggaacttagtctaggtagttcatcaggtagcaatggcttt
tactcctattttaaataa
DBGET
integrated database retrieval system
