Hahella chejuensis: HCH_00062
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Entry
HCH_00062 CDS
T00307
Symbol
phrB1
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hch
Hahella chejuensis
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hch03400
]
HCH_00062 (phrB1)
Enzymes [BR:
hch01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HCH_00062 (phrB1)
DNA repair and recombination proteins [BR:
hch03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HCH_00062 (phrB1)
Prokaryotic type
HCH_00062 (phrB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF5063
Motif
Other DBs
NCBI-ProteinID:
ABC26984
UniProt:
Q2SQU0
LinkDB
All DBs
Position
64758..66233
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AA seq
491 aa
AA seq
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MTVRVVWFKRDLRVTDHGPLYHAARQGPVAPLYVAEPEYWAQPDAGERRWGFVRETLQEL
DQTLSKLGQPLWFMHDSMINVLEYLKDRFGVFELYSHQETGVQWCNRRNQIVREWCRRNG
VLWREWPVCGVLRRATAAERWQAAWKDFMAQTRYPSPKSLPMLGTSPLKPEAWPETIGAD
PTPCVLRQAGGRAAAAQELKSFLQTRGINYFRDTHYPATSFEGGSRLSPYLSHGVISLRE
AVQQSRRALQIYHTHRSADWVKSMTEFLSRLYLRSHYMQQMEDEPGMESINLHKSFNGLR
EHQFDEAKFEAWKNGETGFPLIDAAMKALINYGWINYQLRGLLMSFAANQLWLHWREPAL
HMARLSTDYDPAVHFPLTQQFAGTTGMFEQKIYNPVTESHRLDPAGKFIRAECSALREVS
DAYLHAPWKMPHAEQIMSGCVLGQDYPMPIINNEDASLIAGQRLKAHLEERLDPMETARV
RAAHLRSIKLD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtaagggttgtctggtttaaacgtgacctcagggtcaccgatcatgggccgctt
tatcacgccgcccgacaaggtccggtggcgccgctgtatgtggcggagccggagtattgg
gcgcagcctgacgccggcgaacggcgttggggatttgtgcgggaaacgctgcaggagttg
gaccagacgctgagcaagctgggccagcccctgtggttcatgcatgacagcatgatcaac
gtgcttgagtacctgaaagaccggtttggcgtttttgagctgtattcccaccaggaaacc
ggggtgcagtggtgcaatcggcgcaatcagatcgttcgcgaatggtgtcgccgtaatggc
gtgctgtggcgggagtggccagtctgcggcgtgctgcgtcgcgctacggccgctgagcgc
tggcaggccgcctggaaagacttcatggcgcagacccgctaccccagtcccaagtctctg
ccgatgctgggcacgtcgccgctcaagccggaagcctggcctgagaccatcggcgcagac
cccacgccttgcgtgctgcgacaggcgggcggacgcgccgccgccgcccaggagctgaag
agtttcctgcagacgcggggtataaactattttcgcgacacccattatcccgccacctcc
tttgaaggcggctcacgtctgagcccttatctgtcccatggcgtcatcagcttgcgagag
gcggtgcagcagtcgcggcgcgccttgcagatctaccatacccaccgctccgcggattgg
gtgaagtctatgaccgagtttctgtcccggctctatttgcgcagccattacatgcagcag
atggaggacgagccgggcatggagtccatcaatctgcacaaaagcttcaacggattgcgt
gagcatcagttcgatgaggccaaattcgaagcctggaagaacggtgaaacaggctttccc
cttatcgacgccgccatgaaggcgctgatcaactacggttggatcaactaccagttacgc
gggcttctgatgtccttcgccgccaatcagttgtggttgcactggcgtgagccggcgctg
catatggcgcgtctgtccacggattatgacccggcggtgcattttccgctgacgcaacag
ttcgcgggcaccacagggatgttcgagcagaagatttacaatccggtcactgagtcgcac
cggctcgatcccgccggcaaatttatccgggcggaatgttccgcgttgcgggaggtgagc
gacgcttatttgcacgcgccgtggaaaatgccgcatgcggagcagatcatgtccggatgc
gtattgggacaggattatcctatgcctatcattaataacgaagacgcttcgcttatcgcc
ggccaacgcctgaaagcccatctggaagagcggctcgatccgatggagaccgctcgcgta
cgcgctgctcacctgcgctccatcaagctggactga
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