Hahella chejuensis: HCH_02778
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Entry
HCH_02778 CDS
T00307
Name
(GenBank) protein containing fibronectin type III domains
KO
K20276
large repetitive protein
Organism
hch
Hahella chejuensis
Pathway
hch02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HCH_02778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Laminin_G_3
fn3
Glucodextran_B
CarboxypepD_reg
Big_5
Big_7
Big_6
DUF4261
Motif
Other DBs
NCBI-ProteinID:
ABC29558
UniProt:
Q2SIG6
LinkDB
All DBs
Position
2850834..2860610
Genome browser
AA seq
3258 aa
AA seq
DB search
MIGAYRGIITKMMNGNGYPGMALRLDGETGRKFQFAINAPRALIWATSPKEFELGNWYHL
VGSYKDGVGASLYVNGELVHSVPANENTLITTPSVPLVIGAHYDYNYTHLNFDGLIDSAV
FYSHILSEREIKAHYDAALTGIEPQSKPAKIVGASISDKSTLTESSEIEIYFESPIDESS
FTQDDVRLMKDGSEQSIKVKKLDDVKYAVEVVGGITNRAHYVLEVGPNISSGDVIGLDQD
GDALYGEVGDDVFKLSFDSFFADFVITDEATIGDDASTYENKNILIDSGLLTISGNHTFG
DILLVNGGKIVTSDRAKATLTLSHLSIDESSSIDVSGKGATPDSEVRAYCGGSYGGEGGS
HDWLPNKNVFGDYRRPHDLGIGGAGNNDASFSTGGGAIKVIVDRLELDGKILANGSGGAN
RMGAGSGGSVWIEAGVIVGSGSIAANGGNRVNTTEGGGGGGGRVAIYYDELESFDVSTQV
KALGGRRVHGNYESGAAGTIFIRNKVSGEEKLIIDNRGLDDANVARTGLSGSYPMPVEIY
NARIKVIDANFLKLVAFNVHVAQKGDAKIGSLFFTNSVWQQSGNKLNITDEYSFIGGGFD
TKGDLSLPNNELVVDNFTYTVFSDQNWKTITLKNGGVLTTGVPSGSLTQALIVKASSINV
EAGSRIDVSGKGGLPDAEVCAHCGGSYGGVGGTPVNGQENKSTYGDYRQPVLPGTGGAGG
NGSSGVRGAGAVKIIADRLNLDGEVKADGDYAKSQSESGAGGGSGGSIWLDIGILSGSGR
ILANGGAGDYAGGGAGGRVAVYYSVLNAFDFASQVEVNGGKARHSGFTPGQDGSVYTEQK
HINTYVTGLSVTEYVADKVQEITLSFVNEIDPASFSIDDILLVGDSSSVSITALEQIDGV
QYRIRFSAPLEDGTYRLTVGPDIKTKDGLGMDQNHNGAPNEADDAFVASFVVDTEKPAAP
TVTSHNVSTPVLINARVINLSGVKEPGTLLWLNGKRVSGQEDVNWSVSNIALQEGDNQLS
LKVGDLAGNFSEEVILAINVDSQAPEVLLMAPSGIINSSDNSIRAKAEDVGASGLSLKGA
SVAVYRNGLAVTGELALASGEYIFTATAPLLEGSYKVVVKVADTHGNISAPKEYTFILDS
TKPASPQLEAFPDVNDVNAYRFKGTREKNSSVWVNGVQKLSSEDKTTFDLLLDLQRGDNR
FEFVVIDAAGNASVPTIANIRFDDTAPGQVTFTVDGTGDGTEAMLDWSAYDEFSNGNDIA
AYHIYVSGSNFSDIAGMTPVASTPSGSKSFKLAGLMRGATVYAAVVAEDTAGLKRTTVTA
QPVTPEDIVKPEPIVDLRALSASTSIDLSWAQHANTAGDLAGYRIYVSKAGDEEVNDIPL
ASANISDGRVNVKVEGLQAATANPIRITAYDLAGNESDAVSNPGVTLLANPAGVTTDPLS
GQLKVSWQASQPANLVKEYRIYAQDAAFSSVAGMAPKTTVSGSALTRNIAGLSNGVTYYV
AVTAVNLSGGEETQVAAVTGKPEEDNVGPEIVSIEFISANGPAQLSGSTLTMDGKVVVKA
NDPAGVSRVEFEKDGESWGMDLNADPDFERAWLLAGETDGAHTISVSVYDNLNNVTQIKS
IPVSVDLAAPSAPQLTAPLNGVTTNRVEVDVAGAATANTLVQLFVNGEAQGDAYPVAEAG
VFSGLVTLQDGVNEITAKATYAGRTKVSAASAALSVTLDNTLPNAPQSLSAVGKALGKVA
LGWMPVNDPRVKGYNLYRSTEPFSAIAEAGAPVNQKLITGTSYTDVPFTDGTYFYRVASV
NELGSLSELSDVVDAKADSEAPKAVKVEYAAYGAKDEASGRYGPGLIDVAVTFDEPLRNT
PYFALATENALPLTVELERDFDDELLYRGQFEIEATTPAGVVTPVLAAFDSVGNRGSVVV
SGGDLRIDTQGPDVRTLTVNPAAPIRNDDPAGKEVEVVLTLADDVNSGEEPKLVPFIEEN
GAPTVIAAYQDGIALNKDGSSQAGRPVYVGRMRLPLTAGQDQDGQPNAEQLGFLLSAQDD
LGNAAKPVPAHIRFQVYQGELPPLGAPDQLMGKALPGGRIALNWSLVGSAAGYALYRKAP
GETELSEWKRFDDVLMDSYIDGESTPLADGEYQYAIASLRSENGQTTVSAPGVSVTISSD
ATAPMAPAGLQARLSGSGVHLQWQAPAGDDLRYNVYRLNLPETAEDIDLSDVAALQENLP
KEVALDSKPSETEHLYVVTAVDSAGNESAPSNTQYVNADLLPVNQLSVLLENDSRPVVNW
SHNGASIAGYDIYVGDDADRVKLNADLLTNADYEDLGYNAGEFSSGSVEERFYTVVAKDN
QGKESIGHSLLLPALSVDLKPADESESGIEPIKRGVMNRVLFRVANSGVTKIERVRLKVT
VNVAGAAKSHYSDYFAVEPGSFSDVGVVIGGYQSLDAFADLDISILWSPQAGENVEIRQW
RQVAVGQSALVATLETLNFVRGATGKARFRLENVSDVESEILMAANSGKHDSPDIRFILE
DFAGNVYGATSIKQVTGDVVTTTDRSTVARIPAGGEYVTEYFDVPVPSSVPESALLRLEI
DKLHYQVGRDAHVAIAGTRASQVVTLQETPYYGELTSVEPAKAFAGETVTIKGRAIDRAS
NEPMANAILTVAMKVRGFERQYAAFTDVEGQFEFTYTPTINDTGEYVVSIVHPDKLDRPE
HGRFIVEGASVAPAIYKVSVPRNYEYGMDVRVKAGFSTQLTNVRLEWAAELDEDGQSKPM
ADGLQVSSSTLEAIAPNTTGYLKLKLTGDNLAPENGRLYFKVMTDNQEQPLALLTVQYYL
SAAAPLAKVSPSYITSGVKLGDEQGETFKVTNGGLETLTNARLSLVDQYDAPAPEWVRIV
GDRSLGNIAVNESRTIQLAFRPDATVPKGDYRFKVLIQGDNLPTQPYIVDVAVTDSTIGG
VHFHTSDIYTATKAENGGLIPGLAKVRISLQNEDVLSETYEITTDEFGDGFLENLSTGSY
TYRASAFDHDSVSGRIWVRSGAVTSEEVFLMNKLISVEFSVREITLEDRYEVVLNATYET
NVPAPVVLFEPMSVNLPMMKKGEVFQGEFSLTNYGLVKAENVITTLPAGDEFARFEYMAE
VPETLWPGQVVVVPYRVVAIQDFNPSAQGDASGAGCAQHNYEAICNYSAMCAVGSIINNA
AKMMMNAMGGSCGGGDGTDGGIGGGGVSIGGYFPGGPGTTVTPESPVENAAGGGFCPGPD
AGGGGQCSSGGAGQGSGN
NT seq
9777 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcgcataccgaggcatcattacaaaaatgatgaatggaaacggttatccagga
atggcgctgaggctggatggtgaaacgggaagaaagtttcaattcgctataaatgcgcct
agagccctaatttgggcgacttcacctaaagagtttgaattaggtaactggtatcacctt
gttggtagttacaaagatggagtgggcgcaagtctatatgtcaatggggaacttgttcat
agtgttcctgcaaacgaaaatacacttataactacgccatctgttccgttggttattggt
gcgcactatgactataactatacgcatctcaacttcgacgggcttattgatagcgcagta
ttttattctcatattctttctgaaagagaaataaaagcgcattacgatgcggccttgacc
ggaatcgagcctcagtccaagcccgcaaaaatagtgggcgcgtctatatcagacaaatct
acgctgacagaaagctctgaaatagaaatatatttcgagtcgccaatcgatgaatcatca
tttacacaagatgacgttcggctgatgaaggatggtagcgagcagagtatcaaggttaag
aagcttgatgatgtgaagtatgctgtagaggtggttggtggaataacgaatcgggctcac
tacgttttggaagttgggccaaatatttcttctggagatgtcataggcctggatcaggat
ggcgatgctctgtacggagaagtaggtgatgacgtatttaaattgtcattcgattctttc
tttgcggattttgttataactgatgaagcaactatcggggatgacgcctccacatacgaa
aacaaaaatatactaattgacagtggattgctaacgatctcaggcaatcatacttttggc
gatattttactcgtgaatggagggaaaattgtaacttcagatagagctaaagcgacgctt
actttgagtcatttatcgattgatgaaagttcatccattgatgtaagtggtaagggcgcg
acgccagattctgaggtgcgagcatactgtggcggtagctatggtggggaaggcggaagt
catgactggctgccaaataaaaatgtgtttggagattatcgtcgcccacatgacctggga
attggaggggctggaaacaacgatgcaagcttttcaacaggtggtggagcgataaaggta
attgtcgatcgtttggagctggatgggaagattctggcgaatggttctggtggcgcaaac
cgcatgggggccggaagcggcggctctgtgtggattgaagctggtgttattgttgggagt
ggctctatcgccgcaaatggtggtaatagagttaatactactgagggcggtggcggtggc
ggtggtcgcgtagctatatactacgacgaactcgaatcctttgatgtttccactcaagtt
aaggcccttggcggtaggcgtgtacacggaaactacgaaagtggcgctgcgggaactatt
tttatacgaaataaggttagtggtgaagagaagctaatcatcgacaatagaggcttggat
gacgctaatgtcgccaggactggcctgagtggctcgtacccaatgcccgttgagatttat
aacgccagaataaaagtaattgatgcaaactttctaaagcttgttgccttcaatgtccat
gtcgcccaaaaaggcgatgctaaaattggaagcctcttctttactaatagtgtatggcag
cagtcaggaaataaactcaatattactgatgaatatagtttcataggtggaggctttgac
actaaaggagacttatcacttcctaataatgagctggtcgttgataattttacttacact
gtttttagcgatcagaactggaaaacgatcacgctgaaaaatgggggggtgctgaccaca
ggcgttccctctggatcgctcacgcaagcgttgatagttaaggcgtcttctatcaatgtc
gaggctggttccaggattgatgtaagcggaaagggagggctccctgacgctgaagtatgc
gcacattgtggtggaagttatggtggtgtgggcggaacgccggtcaacggccaagagaat
aaatccacttatggagactatcgtcagccggttctacctgggaccgggggcgctgggggg
aatggcagttctggtgtgcgaggagccggcgccgtaaaaattattgcggatcggctgaat
cttgacggagaagtgaaagcggatggcgactatgctaaatcacagtccgaatctggagca
ggagggggaagtggcggctccatttggcttgatatcggcattttgtcagggagtgggcgg
attctggctaacggcggggctggtgattatgctggcggcggcgccggtgggcgggttgct
gtttattactctgtactgaacgcgtttgatttcgcatcgcaagtagaagtaaacggcgga
aaggccagacattcagggtttacgcctggacaagatggctccgtatacactgaacaaaag
catataaatacctatgttactggcttgtctgtgactgaatatgtcgctgataaagtgcag
gaaattacgctgtcgtttgtcaatgagattgatcctgcttcgttttctatcgacgacatt
ttgcttgttggtgacagctcttctgtttccatcactgctttagagcaaatagatggggtg
caataccgcattcgtttttccgcccccttggaagatggaacatatcgcttaacagtcggc
cctgatatcaagacaaaagatggtcttggaatggaccagaaccataatggcgcgcccaat
gaagccgatgatgctttcgttgcttcctttgtcgtggataccgaaaagcctgctgcgcct
actgtaacgtcgcacaatgtttcaacgcctgtattgataaatgccagagtcattaatctc
agtggtgtgaaagaacctgggacgctcttgtggctcaacggtaaaagagtatcagggcaa
gaagacgtaaactggagcgtctccaatattgcgttgcaggaaggtgacaaccaactgtca
ttgaaagttggcgatctggcaggcaacttttcagaagaagtcatactggctatcaatgta
gacagccaagcgcctgaggtactgctgatggcgccttcgggaatcatcaacagtagtgac
aattccattcgcgccaaggcggaggatgttggcgccagtgggctctcattgaaaggagcg
tcagtcgctgtttatagaaatggcttggcggtaacaggtgaactcgccttagcgtcaggt
gaatacatttttacagcaactgcgcctttgctcgaagggagctataaagttgtcgtcaag
gtagctgatactcatgggaacatctccgctcctaaggagtatacgttcatccttgattcg
accaagccagcatcaccacagcttgaggctttccctgatgtcaatgatgtcaatgcgtac
cgctttaaaggcacaagagagaaaaactcaagcgtatgggtaaatggcgttcagaagctc
tccagcgaagacaaaactacctttgatctgctcttggaccttcagcgtggcgataataga
tttgagtttgtcgttattgacgctgccggcaacgccagcgtccccaccatcgccaacatt
cgttttgatgatactgccccagggcaggtgacgttcactgtagacggaacgggcgacgga
acggaggcgatgctggattggagcgcttacgatgagttctctaacggtaacgacattgcc
gcttaccatatttatgtatcaggttcgaacttctctgatatcgcaggaatgaccccggtg
gcgtcaaccccatctggctccaagtcattcaagctcgccggtctgatgcgaggcgcgaca
gtgtatgcggctgttgtggcggaggatactgctggcctgaaacggacgactgtaactgcg
cagccggttactcctgaagatattgttaaaccagagcctatcgttgatttgcgagcgctt
tccgcatcgacttccatagatttgtcctgggcgcaacatgcgaacacggctggcgattta
gcaggctacagaatctatgtgagcaaggcgggagacgaagaggtcaatgatattccgctg
gcctcggcgaatatctccgatgggcgcgtgaacgttaaagtggaagggttgcaagctgct
actgcgaacccgattcgcattacagcctatgatctggctggcaatgagtccgatgctgtc
tccaatcctggcgtgacgttgttggctaaccctgctggcgtgaccacagatccgttaagt
ggccagttgaaggtaagctggcaagcctcccagcctgccaatctggtaaaggaataccgt
atctatgcgcaagacgccgccttctccagcgttgctggcatggctcccaaaactaccgtc
agcggcagcgcgctcacacgcaacattgcaggcctgtctaacggtgtgacctattacgtg
gccgtgacggcggtgaatctctctggcggtgaagaaacgcaagtggctgctgtgacaggc
aagccggaagaagataacgtcggacctgaaatcgtatccatcgagttcatcagcgcgaat
ggcccagcgcaactgagcggttccacactgactatggacggtaaggtcgttgtaaaagca
aacgaccctgctggcgtcagtcgagttgagtttgagaaagatggcgaaagctggggaatg
gacctgaacgcagatcctgatttcgagcgcgcctggttgctggcgggagagactgacggc
gctcacacgatcagtgtgtccgtctatgacaatctcaataacgtcactcagattaagagc
attcctgtcagcgttgatttggccgcgccgtctgccccgcagttgactgcgccgctcaat
ggcgtcactaccaacagggttgaagttgatgtggcgggagcagcgactgcgaataccttg
gtgcaactgttcgtcaacggtgaagcgcaaggcgatgcatatccagttgctgaagccggc
gtgttctccggcttggtaactctgcaggatggcgtgaatgaaatcaccgccaaggcgacc
tatgcagggcgcactaaagtcagcgccgccagtgcggccctgtcagtaactttggataac
actctgccgaacgcgccgcaaagtttgtctgcagtcggaaaggcgctgggtaaagtggcg
ctgggctggatgccggtcaacgaccctagagtgaaagggtataacctgtatcgctccact
gaaccattcagcgccattgcagaagctggcgcgccggtgaatcagaagctgattactgga
accagttatacagatgtgccttttactgatggaacctatttctatcgtgtcgccagcgtt
aatgagctaggcagcttgagtgagctatcagatgttgttgacgcgaaggctgacagcgag
gcgccaaaggcggtgaaagtcgagtatgcggcatacggcgccaaggatgaagcgagtggt
cgttacgggcctgggttgattgatgtcgccgtaacttttgatgagccactgcgcaataca
ccctattttgccttggcgacagaaaatgctctgccgctcaccgtagagttagagcgcgac
tttgatgatgagctgttgtaccgcggtcagttcgagatcgaggcgactacgcccgctggc
gttgtgacccccgtgctggcggcgtttgacagtgttggtaatcgtggatctgttgtggta
agcggtggcgatctgcgcattgatacgcaagggccggatgtccgtactttgacagtcaac
cccgctgcgccgattcgtaacgatgatccggctggcaaagaagttgaagttgtcctgacc
ctggcggatgacgtcaattcaggcgaagaaccgaagctggttccgtttattgaggaaaat
ggcgctcctacggttattgctgcttatcaggacggtattgcgctgaacaaagacggatct
tcccaggcggggcggccggtttacgttggacgcatgcgattgccgttgacggcgggacaa
gaccaggatggacagcccaacgcggaacagctcggctttttgctttccgcccaggacgat
cttggtaacgccgccaagcctgtgcctgcgcacatacgctttcaggtttatcagggagag
ttgcctccgttaggcgcgccggatcagttgatgggcaaagccttacctggtggacgcatt
gccttgaactggagtctggtgggcagcgcggcggggtatgcgttgtatcgtaaagcgccc
ggtgaaaccgagttgtcagaatggaagcgattcgacgacgtgttgatggatagctacatc
gacggtgagtcaacgcctttggctgatggcgaatatcagtacgccattgcctctctgcgt
agtgaaaacgggcagacgactgtcagtgcgcctggcgtgtctgtgacgatcagttctgat
gctactgcgccgatggctcctgccggcctgcaagccaggctgagcggttccggcgtgcac
ctgcaatggcaagcgccagcgggcgatgatttacgttacaacgtctatcgactgaatctg
ccggaaacggcggaggatattgatctctctgacgttgcagcgcttcaggaaaatctcccg
aaagaggtcgcgctggatagcaagccttcagaaactgaacacctgtatgtggtgacggcg
gtggatagcgcaggtaatgagtctgctccttccaacacccagtatgtaaatgcagatttg
ctgcctgttaatcaattgagcgtgttgctggaaaacgacagccgtccggtggtcaactgg
agccacaatggcgccagtatcgctggatacgatatttacgttggcgatgacgcagatcgc
gtcaagctcaatgctgatctgctgactaacgcggattatgaagatctgggttacaacgcg
ggtgagttcagctccggctcggtggaagagcgcttctacactgtcgtggcgaaagacaac
caaggcaaggaaagcattggccacagtcttttgctgcccgcgctgagcgttgatttgaag
cctgctgacgagtctgaaagcggcattgagccaatcaaacgtggcgtcatgaaccgagtg
ttgttccgcgtcgccaatagcggcgtgaccaagattgaacgtgtgcgtttgaaagtgacg
gtgaacgtcgcgggagcggccaagtctcactactcggactacttcgctgttgaaccggga
agcttctccgacgtaggcgttgtcatcggcggatatcagtctctggatgcgtttgcggat
ctcgatatcagcattctctggtcgccgcaggcgggtgagaacgtagagattcgtcagtgg
cgtcaggtagccgttggccagtccgcgctggtggcgactctggagacactgaacttcgtt
cgcggcgcaacaggaaaagcgcgattccgattggaaaacgtcagcgatgtggagtctgag
attctcatggcggcgaacagcggtaagcacgactcaccagacattcgctttatccttgag
gacttcgctggcaacgtgtatggcgcgacctctatcaagcaagtgactggagatgtcgtc
accaccacggaccgctccacagtagcgcgtattccagcgggcggcgagtacgtcacagaa
tactttgacgtgcctgtgccgtcttctgtcccggagtcagcgttgctgcgtttggagatt
gacaagctgcactaccaggttggccgcgatgcgcatgttgcgatcgctggtacacgcgcg
tcacaagtagtgacgttacaggagacgccttattacggtgagctgacgtctgtagagccc
gccaaagcgttcgctggtgaaaccgtgacaatcaagggacgtgcgattgatcgcgccagc
aatgaaccgatggccaacgccatattgacggtggcgatgaaggtgcgcgggtttgagcgc
caatacgctgcctttactgatgtggagggccagttcgagttcacctacacgccgaccatc
aatgacactggagagtatgtcgtttccattgtccatccagacaaattggaccgtccggaa
cacggccgtttcattgtagaaggcgcatctgtggcccctgccatatacaaggtgtctgtg
cccagaaactatgaatatggcatggacgtgcgcgtcaaagccggtttcagtacgcagttg
accaatgtgcgtctggagtgggcggcggagctggatgaagacggtcagtcaaaaccaatg
gcggatggactgcaagtcagcagctcaacgctggaggctatcgcgccgaatactacgggt
tatctcaaactgaagctgacgggcgataatctggctccagaaaatggacgtctttacttc
aaggttatgacggacaaccaggagcagcctttggcgttgctgaccgtgcaatattatctg
tcagcggcggcgccgttggcgaaggtatcgccaagctacatcacctctggcgtcaagctg
ggagatgagcaaggggaaacctttaaggtaaccaacggcggcctggaaacattgaccaat
gcacgcctgtctctggtggatcaatacgatgcgccagctcctgagtgggtgcgtatcgtt
ggcgatcgcagtctggggaatattgcggtgaatgaatcgcgcactatccagttggcgttc
cgtcccgatgcgactgtgcctaaaggcgactaccgctttaaggtgttgatccagggcgat
aatttgccaacccagccttacattgtagatgtggcggtgacggactccaccatcggcggc
gtgcatttccatacttcggatatatacaccgccaccaaggctgaaaacggcggcctgatt
ccaggtttggcgaaagtacgcatctcgctgcaaaacgaagacgtgctcagcgaaacctat
gaaatcactacggatgaattcggtgatggcttcctggaaaacctctccactggctcttat
acctaccgagccagcgcgtttgaccatgacagcgtgagcggacgtatctgggtgcgctcg
ggtgcggtgaccagtgaagaagtgttcctgatgaacaaactgatctcggtggagttctcc
gtacgtgaaatcaccctggaagaccgttacgaggtggtgttgaacgccacctacgaaact
aacgtcccggccccagttgtcctgttcgaacccatgtcggtcaacctgccgatgatgaag
aaaggcgaggtgttccagggtgagttcagtttgacgaactatggcttggtaaaagctgaa
aatgtcatcacaacactgcctgctggcgatgaattcgcgcgctttgaatatatggcggag
gtgcccgaaaccttgtggcctggtcaggtggttgtggtgccttatcgtgtcgtcgccatt
caggactttaaccccagcgcccaaggtgacgcttctggcgcagggtgtgcgcaacataac
tatgaggctatctgtaactactccgccatgtgcgccgttgggagcattattaacaatgcg
gcgaagatgatgatgaacgcgatgggaggctcctgtgggggcggtgatggaacagatggc
ggaattggtgggggcggagtatcgatcgggggctatttcccaggtggcccaggcactacg
gttacccctgaatcaccggtggaaaatgcggcgggcggaggtttctgccctggaccggat
gccggtggcggaggccagtgttcttcaggtggcgcaggtcaaggcagtggtaattag
DBGET
integrated database retrieval system
