Candidatus Hodgkinia cicadicola Dsem: HCDSEM_042
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Entry
HCDSEM_042 CDS
T00938
Symbol
valS
Name
(GenBank) putative valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
hci
Candidatus Hodgkinia cicadicola Dsem
Pathway
hci00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hci00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HCDSEM_042 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hci01007
]
HCDSEM_042 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hci03016
]
HCDSEM_042 (valS)
Enzymes [BR:
hci01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
HCDSEM_042 (valS)
Amino acid related enzymes [BR:
hci01007
]
Aminoacyl-tRNA synthetase
Class I (U)
HCDSEM_042 (valS)
Transfer RNA biogenesis [BR:
hci03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HCDSEM_042 (valS)
Prokaryotic type
HCDSEM_042 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
tRNA-synt_1g
Motif
Other DBs
NCBI-ProteinID:
ACT34230
LinkDB
All DBs
Position
31709..33826
Genome browser
AA seq
705 aa
AA seq
DB search
MYSSELYSPYISRGLGASLSSLKAKSCLDVVAPPPNVTGDLHVGHALNVALQRALAAYEA
RRRRRVRFVLGADHAGIAVRFVIASRCGYASARRFWTWKKRVAARLLTQLEALLAASACS
KRRFTLDAPFGCAVSCAFVKLWKAGLITRRRRALLWDGALASAISKLETVEKPEWRRELK
WKFVLPRGVCQRWDGGWVLSNYVSALRPAGELAVASVVVDVNSFCGCKLAARHVVDAASA
ESVRLLVNARSGVNSFGALADLKLSACASLLMACAMSVRAPASALATAGVCAPQRQLAGA
LYSEKTGHRVERAVSVQWFVSLRALAALQPLAGLKIKPASWRGLLNTWITSLGLWCVSRH
MAWGHRLPVWWADNGFEVRDSEHKARYYAILRCGAFGGLPPRLSRDVLVLDTWFSSALWR
LSCLGWPHKTKQLRTAYGLGVVFTGYDILFFWIVKMLLVSSWLMRARLPFKTVIVHPVVC
DAVGAKMSKTRGNTVAPNALVNAYGLNAVWAHMFCADLKLRRLSLSSSQMSHNRNLVTKL
WNVARAGCDSKRCEALACKLAAGAVFDRFRVVDRAISRFDASVGSRVLAGLVKHTLGKLA
DTRGRRCACASRLARCVWQFYWPCANAFGAPPPHTRFVKAGALAAALAALPAGRVIATNC
DRLFLQARGLLAELTAANVYYFKRLRLGAGFRPMLWNNSLVLVAS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgtatagcagcgagctgtattcgccttacataagccgaggcttgggcgcatcgctgtct
agcttgaaagctaaaagctgtttggatgtggtggcgccccccccaaacgttacgggcgac
ttgcacgttggccacgcgctcaacgtcgcgctgcagcgcgcgcttgctgcctatgaagct
cgacgacgacggcgtgtgcgctttgttttgggcgcagaccacgctggcatagccgtgcgc
tttgtgatcgcttcgagatgcggctacgcgtcggcgcgtcgattctgaacttggaaaaag
cgagtagctgcgcgcttgctaactcagcttgaagcgctgctggctgctagcgcgtgctcg
aagcgccgattcacactagacgcgccctttggctgcgccgtaagctgcgcgtttgtcaag
ctttgaaaagctgggctaataaccaggcgacggcgtgcgctgctttgggatggcgcgcta
gcctccgcgatctcgaagcttgaaacggttgagaagccggagtggcgacgcgagctcaag
tgaaagttcgtgctacctcgaggcgtctgtcagcgatgagacggtggctgagtgctgtct
aactacgtgagcgcccttcgacctgcgggcgagctagctgtggcttcggttgttgttgac
gttaacagcttttgtggctgcaagctagctgcgcgtcacgttgttgacgcggccagcgcc
gaaagcgtgcgcctgctggtcaacgccaggtcgggcgtaaacagctttggcgcgctagcc
gatttaaagctttcggcgtgcgctagcttgctgatggcgtgcgcgatgagcgtgcgcgct
ccagcttcggcgctcgcaacagctggtgtttgtgcgccgcagcgtcagctggctggcgcg
ctatatagtgaaaaaactggccatcgcgtcgagcgcgcagtaagcgtgcagtggtttgta
agcttgcgcgcgctggctgcgctccagcctttagctggcttgaaaatcaaacctgctagc
tggcgagggctgctcaacacgtgaataacgagcttagggctgtggtgcgtgtcgcgtcac
atggcgtgaggtcatcgtttgccggtttgatgagctgataacggcttcgaagttagagac
tcggagcacaaggcccgctactacgccatactgcgctgtggcgcgttcggtggcttgccg
ccgcgcttgtcacgcgacgtgctggttttggatacttggttttcgtccgcgctgtgacgg
ctgtcgtgtcttggctgacctcacaaaaccaagcagctgagaacagcttacggcttgggg
gttgtgtttacgggctatgacatcttgtttttttgaatagtgaaaatgctgctcgtttcg
agctgattaatgcgcgctaggctgccgtttaaaactgtgattgtgcatccggtggtttgc
gacgccgtgggcgctaagatgtccaaaacaaggggtaataccgttgcgcctaacgcgctt
gttaacgcttacgggctaaacgccgtgtgagcccacatgttttgtgcagatcttaagctg
cggaggctgagcctaagttctagccagatgtctcacaatcgcaacttggttacgaagctt
tgaaacgttgcgcgcgccggctgcgactcgaagcgctgcgaagctctcgcttgcaagctt
gcggctggcgccgtgttcgacaggtttcgggttgtggacagggctataagcaggtttgat
gcgagcgtgggctctcgcgtgcttgcaggcttggttaaacacacgcttggcaagttggct
gacaccagaggacgaaggtgtgcgtgcgctagccggctggcgcgctgcgtgtgacagttt
tattggccttgcgctaacgcgtttggcgcacccccacctcatactaggtttgtaaaggct
ggcgcgctggcggctgcgctggcagcgctgccagctgggcgcgtgatagcaacaaattgc
gacaggttgtttttacaggccagggggctgctggctgagctaactgctgcaaacgtgtac
tatttcaagcgtttaaggcttggtgctggctttaggcctatgctttgaaacaacagctta
gtgctggttgctagctag
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