Helicobacter cholecystus: NCTC13205_00268
Help
Entry
NCTC13205_00268 CDS
T06600
Symbol
ligA_1
Name
(GenBank) DNA ligase
KO
K26441
DNA ligase [EC:
6.5.1.1
]
Organism
hcl
Helicobacter cholecystus
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NCTC13205_00268 (ligA_1)
Enzymes [BR:
hcl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NCTC13205_00268 (ligA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_OB_2
DNA_ligase_A_M
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
VEJ24134
UniProt:
A0A3D8IWB7
LinkDB
All DBs
Position
1:complement(285903..286745)
Genome browser
AA seq
280 aa
AA seq
DB search
MRAIFLLSLFFLSLFGRELWLLQQFDPQSIQNNPHLYVYSEKLDGVRAYWDGKHLYTKGD
RKLIAPNFFTQNFPPFAIEGELWSKRGDFENIVSIIKSKSNPQKWHELKFYIFEVPNQKG
GILERLDFLQAYLNTHPAPFIQIIPQFQVTTLQALKEVLQTIHKEGAEGLVVRNKFAPYY
TGRNKDAMKFKPYQDRECKITAYIQGRGKYKNQVGAFECIDEKTKFKIGSGMSDEFRKNP
PKIGTIITYKYFGLHKNNKPKFPVFLRIRSDESLNTKEEK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagagctattttcctcctctctttattttttctctctctttttggcagagaattatgg
cttttacaacaatttgatccccaaagtattcaaaataatcctcatttatatgtctatagt
gaaaaactcgatggagtaagggcatattgggatggaaaacatttatacactaagggggat
aggaaacttattgctccaaacttttttacacaaaattttcctccttttgctatagaggga
gagttatggagtaagagaggggattttgaaaatattgtctctatcattaaatctaaaagc
aatccacaaaagtggcatgaattaaaattttatatttttgaagtccccaatcaaaaaggg
ggtattctagaaagattagactttttacaagcctatcttaacactcaccctgcccccttt
attcaaattattcctcaatttcaagtcacaactcttcaagcactcaaagaagtattgcaa
acaatccataaagagggtgcagaaggattggtggtaagaaataagtttgctccctattac
acaggtagaaataaagatgcgatgaaatttaaaccctaccaagatagagaatgcaaaatt
acagcctatattcaaggtagggggaaatacaaaaatcaagttggagcctttgaatgtata
gatgaaaaaactaaatttaaaattggaagtggaatgagcgatgaatttagaaaaaatcct
ccaaaaattggcacaattatcacatacaaatattttggtctacacaaaaataataagcca
aaatttcctgtttttcttagaattcgtagcgatgaaagcttaaatacaaaggaggaaaaa
tga
DBGET
integrated database retrieval system