Helicobacter cholecystus: NCTC13205_00577
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Entry
NCTC13205_00577 CDS
T06600
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
hcl
Helicobacter cholecystus
Pathway
hcl00521
Streptomycin biosynthesis
hcl00541
O-Antigen nucleotide sugar biosynthesis
hcl01100
Metabolic pathways
hcl01110
Biosynthesis of secondary metabolites
hcl01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NCTC13205_00577 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NCTC13205_00577 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NCTC13205_00577 (rfbC)
Enzymes [BR:
hcl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NCTC13205_00577 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
VEJ24440
UniProt:
A0A3D8ITL7
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All DBs
Position
1:609070..609630
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AA seq
186 aa
AA seq
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MSRFSFTSAPLKGVYIIEPKPIKDSRGYFERYFCTKDFLEIGLNKPIVQINHSYTKGIGS
IRGLHYQTPPHTEIKIIRCLKGKIYDVAVDIRENSPTFCQYFGIELSEENGKYLYIPEGF
AHGFQTLSDEAEILYLVTSAFNAESDSGLNALDPVLAIKWPLPIGHISEKDKNASYINQE
FKGIKC
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctttagtttcacttcagctccacttaaaggtgtatatatcatagaaccaaag
cctattaaagatagtcggggatactttgagagatatttttgtactaaagattttttagaa
attggactaaataaacctattgtgcaaattaatcattcttataccaaggggattggctcc
attagaggactgcactatcaaactcccccacatacagaaatcaaaattatcagatgtctt
aaaggaaagatctatgatgtagctgtggatatcagagaaaactctccaaccttttgccaa
tattttggcatagaactcagtgaagagaacgggaaatatctctatatcccagagggattt
gcacatggattccaaacacttagcgatgaggctgagatcctatatcttgtaacttccgca
tttaatgcagaatctgatagtggactaaacgccttagaccctgtacttgcaataaagtgg
ccactacctattggacatatctcagaaaaagataaaaatgcttcatatatcaatcaagaa
ttcaagggtataaaatgctaa
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