Halomonas chromatireducens: LOKO_02268
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Entry
LOKO_02268 CDS
T04292
Symbol
exoA
Name
(GenBank) Exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hco
Halomonas chromatireducens
Pathway
hco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LOKO_02268 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hco03400
]
LOKO_02268 (exoA)
Enzymes [BR:
hco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LOKO_02268 (exoA)
DNA repair and recombination proteins [BR:
hco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LOKO_02268 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AMD01328
UniProt:
A0A109UM12
LinkDB
All DBs
Position
2394864..2395631
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AA seq
255 aa
AA seq
DB search
MKIATINVNGIREAVGRGFLDWLAEQDADVICVQNLKAKSFELDDSILYPEGYEGYFLDA
EQDGFSGVGIYCRKIPKAIMYGLGFPQCDHEARFLQADYDRFSIVSFLMPDGSDYAAKQA
FMAQYQEYLSKMARKRREYIICGTWHIAHKTIDLENWADNQATPGFKPEERAWMDQVFGP
TGFIDTFREINRDAGEYTWWPKLDQDEPRSRQEGWRIDYQIVGPNLRRHVTDAWIDYDAT
FSEFAPLFVEYDLTL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgccaccatcaatgtcaacggaatccgagaagccgtcggtcgaggcttcctc
gactggctggccgaacaggatgccgatgtcatctgcgtccagaacctcaaggccaagagc
ttcgagctggacgacagtattctctatccggaaggctacgaaggctacttcctggatgcc
gagcaggacggtttctccggcgtgggtatctactgccgcaagattcccaaggcgatcatg
tacgggctgggctttccccagtgcgaccatgaagcccgcttcctgcaggctgattacgac
cgcttcagcatcgtcagcttcctgatgcccgacggcagcgactacgccgccaagcaggcc
ttcatggcgcagtatcaggagtacctgtcgaagatggcccgcaagcgccgcgagtacatc
atctgcggcacctggcacatcgcccacaagaccatcgatctggaaaactgggcggataac
caggcgaccccgggcttcaagcccgaggagcgcgcctggatggaccaggtgttcggtccc
accggcttcatcgataccttccgcgagatcaaccgcgacgccggcgaatacacctggtgg
cccaagctcgaccaggacgagccgcgctcgcgtcaggaaggctggcgcatcgactaccag
atcgtcggccccaacctgcgtcgacacgtgaccgacgcctggatcgactacgacgccacc
ttcagcgagttcgctccgctgttcgtcgagtacgacctgacgctctga
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integrated database retrieval system
