Hippocampus comes (tiger tail seahorse): 109510122
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Entry
109510122 CDS
T04969
Name
(RefSeq) LOW QUALITY PROTEIN: VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcq04131
]
109510122
Membrane trafficking [BR:
hcq04131
]
Protein recycling
Others
Others
109510122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Chordopox_A13L
AIF-1
Motif
Other DBs
NCBI-GeneID:
109510122
NCBI-ProteinID:
XP_019715790
LinkDB
All DBs
Position
Unknown
AA seq
1199 aa
AA seq
DB search
MAPRYAFCLLLLFSSEWTRVSSISTCTPDVRCSLSGHLAHISAPPRELLAQDLAHFGALP
VGDFVGSPGGDGSSEVTAAIAGSSPKVEAPPARQEDACCPQENASDYQAKLSPPDNQNDV
DGEENGDDVDSTADENRRGRSARGAETWADVGGEGAHEASLPDPVEVQLASSTFALAGDT
AHNQAMVHWSGQNSSVILMLTKYYDFSSGRVTESSLWRSTDYGSTYEKLNEKAGPKTILS
YLYVSPNNKRKIMLLTDPEVESSLLISLDEGASYQKHSLAFDILSLLFHPEQEDWILAYS
HDQKLYVSVEFGRRWQLVHDNVVPNRFYWSRLGLDKEQGMIHLEINVSDGRSQYITCKLQ
NCSEGNKGKPFPGFIIPNSLVVQDEYVFIQVPTGGQSVHYVSYRRHSFYPVKLPKYTLPK
DLQIISTDDNQVVAAIQDWHQNDSYNLYMSESRGLFFTLMLEDVVSSGGPEGNIMIDLYE
VGGTXYRNTHRHVFFILCEEQLWRLLQAPATDLQGKRVDCEQPYCSLHLHLHVSENPYTS
GNIVSKDTAPGVIIASGVVGPELTTTNVSIFITSDAGNTWREVFQEEYSVFFLNQGGSLV
AIRHTPLPIRHIWLSFDEGRNWDKFSFTSSPLYVDGVLGEPGEDTLIMTIFGHFSHRSEW
QLVKIDFRSIFQHRCTSQDYVTWQLDNEGEVCIMGMKRIFQKLRVNARCVKAREQYISQM
SESCPCTEADFECDYGFERQVDGSCTPSFWFVPSATSRDCINGDSFLNSTGYRRALSNNC
TAGTLRKYSPRRQKCPSQVPKGLQLFTSEGTLVATLDKNVTFLVFLEEGLSSTTSITVDF
GDGTAISYVNISSIEDGVKHVYGKVGIYQVSAIASNFLGFDRVTLYLHVTCLLEQVQLSG
PSVAVKNKAVNFTTALRPVNVGTVTYYWWFDNKTEPLLSLVGGTSFTFSREGSHVVTVQA
SVGNTVQQDHMTVAVYDYFQSHILAFSSNLDDANPDLAEWRTDIGRVVKRSVVQVTGISE
DQLLISVLPGLPTTAEIFIVPNKGHRGGAAGEKRLHLEQLSQVLLNALNQDLVQFTLKAG
VQVNVYASRLSPAPLVDGSDSSHSSTAIIMLVSVALMGLVVFAVYKFKRKIPGLKTYTAE
QPDKEQEVVPTVTSMADAKAEADGLTSLDRVDVQLDSKSAGYLPSHADIKLSDEAPHVF
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcgatacgctttttgccttttactgcttttctcctccgagtggacgcgtgtc
tcctccatctcaacttgcacgccggacgtaaggtgcagtctctcgggtcatttggcgcac
atcagcgcgcccccccgggagctcctggcgcaggatttggcgcattttggagcgcttcca
gtcggggactttgtcggatcgcccggaggcgacggcagctccgaagtcacggctgcgatc
gcgggaagttcacccaaagtcgaggcaccacccgcgcggcaagaagacgcgtgttgcccc
caagaaaatgcgtcggactatcaagcaaaactttcgccgcctgacaaccaaaacgacgtg
gacggcgaggaaaacggggatgatgtggattcaaccgcggatgagaaccggagggggaga
agcgcgaggggcgcagagacttgggccgatgtgggaggcgagggcgcgcacgaagcttcg
ttgcccgacccggtggaggtccagctggccagctccaccttcgccctggccggggacacc
gcgcacaaccaggcgatggtgcactggtccggccagaacagcagcgtcatcctcatgttg
accaaatactacgatttcagctcgggcagagtgacggagagttctttgtggagatccacc
gattacggcagcacgtacgagaaacttaatgagaaagcggggcccaagaccatcctgagc
tacttgtacgtcagtcccaacaacaagcgcaagatcatgctactgaccgacccggaggtg
gagagcagcctgctcattagccttgacgagggggcgtcctatcagaaacacagcttagcc
tttgatatcctcagtcttctttttcaccccgagcaggaggactggatcctggcttacagc
cacgaccaaaagctgtacgtctccgtggaatttggcaggaggtggcagcttgtgcacgac
aacgttgtccccaacagattctactggtccaggttgggcttggacaaagagcaaggaatg
atccacctggagatcaacgtctctgatggacggtcgcagtacatcacttgcaaacttcaa
aattgctcagagggaaacaagggcaagcctttccccggatttatcatccccaactccctg
gtggtgcaggatgaatatgttttcatccaggtgccaacaggaggccagtccgttcattac
gtgtcctacagaagacactccttctacccggtcaagcttccaaagtacactctgccaaaa
gacttgcagattattagcaccgatgacaaccaggtggtggcggccattcaagactggcac
cagaacgactcgtacaacctgtacatgtccgagtccaggggtctcttcttcacgctgatg
ctggaggacgtggtgagcagcggagggccggaaggcaacatcatgatcgacctttacgag
gtgggcggcacataatataggaatactcaccgtcatgtattctttatcctctgcgaagaa
caactatggcggcttctgcaggccccggcgacggatctccaaggcaaacgggtcgactgt
gagcaaccgtactgctcgttacatctgcatcttcacgtttcggagaacccttacacctct
ggaaacatcgtcagcaaagatacagcgcctggagtgatcatcgcatcgggagtagtcgga
ccagagcttaccaccactaatgtcagcattttcatcacatccgacgctggcaacacgtgg
agagaggtttttcaggaagagtacagcgtgtttttcctgaatcaaggaggatctctggtg
gctatccgacacacacctctgcctattagacatatctggctgagttttgatgagggcaga
aactgggacaaatttagcttcacctcctcgccgctctatgtcgacggggtgctgggggag
cccggagaggacaccctcatcatgacaatcttcggtcacttcagtcaccgatccgagtgg
caactcgtcaaaattgacttccgctccatttttcaacaccgctgcacttcgcaagattac
gtgacgtggcagttggacaatgagggagaagtgtgcatcatgggaatgaagagaatcttc
cagaaactgcgagtaaacgctcgatgtgtcaaggccagagaacagtacatctctcagatg
tcagaatcctgtccgtgcacagaggccgattttgagtgcgactatggatttgagaggcag
gtcgatgggagctgcacgccgtcgttctggtttgttccgtcggccacatccagagattgc
atcaacggggacagcttcctcaattccacaggataccgccgagctttatctaacaactgc
accgcggggactctgcgaaagtacagccccaggcggcagaagtgtcccagtcaagtcccc
aagggcctgcagctcttcaccagcgagggcacactggtagccacgctcgacaagaacgtc
accttcttggtctttctcgaagagggcctcagctcgacgacgagcatcacggtggacttt
ggcgacggcaccgcgatatcctacgtgaacatcagctccatcgaggacggggtcaagcac
gtctacggcaaagtcggcatctaccaagtttctgccatcgcgagcaactttctgggattt
gatcgggtgactctgtacctccacgtcacttgtttgctggagcaggtgcagctctccggt
ccgtccgtggccgtcaagaacaaagccgtaaacttcacgacggcgctgcggcccgtcaac
gtgggcacggtcacgtactactggtggtttgacaacaaaacagagcctttgctgagcctg
gttggagggacgtccttcaccttctcccgggaaggaagtcacgtggtcaccgtgcaggct
tcagtcgggaacacggtccagcaggaccacatgacggtggcggtttatgattatttccag
tcacatattctagctttttcctctaatctggatgatgccaatcccgatcttgctgagtgg
cggacagacatcgggagggtggtgaagcgctctgtggtccaggtcaccgggatcagcgag
gatcagctgctgatcagtgtgctccccggtctgccgaccacggccgagatcttcatcgtt
cccaacaaggggcaccgcggcggcgctgcgggtgaaaagcggctacacctggaacagctc
tcgcaggtgctgctaaatgctctaaaccaggacctcgtccagttcacactcaaggcggga
gtgcaggtgaatgtctacgccagcagactgtcgccagctcctctggtggacggcagcgat
agcagccacagcagcactgcaattatcatgctggtgtccgtggctctgatgggtctggtt
gtctttgccgtgtacaaattcaaaaggaagatcccaggcctcaagacgtacacggcggag
cagcctgacaaagagcaagaggtcgtgcccacagtcacctccatggcggacgcgaaagcc
gaggcggacggcctgacctcactggatcgcgtggatgtacagctggattcaaagagcgca
ggctacctgccatcgcacgcagacatcaagctgtctgatgaagcgccccacgtgttttaa
DBGET
integrated database retrieval system
