Hippocampus comes (tiger tail seahorse): 109510815
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Entry
109510815 CDS
T04969
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase isoform X1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcq03016
]
109510815 (tyw1)
Enzymes [BR:
hcq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
109510815 (tyw1)
Transfer RNA biogenesis [BR:
hcq03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
109510815 (tyw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
109510815
NCBI-ProteinID:
XP_019716975
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MCSSKAFATMHGFIFLASFFKTSATTSNSKGLHSSHSASENYAMYIWHNRFYVYAAFALA
LTLWVSFKMILKKKSLSKDVSSWVQEAMKNPEGCDKRAEVHVSGVKIFFGSQTGTAKGFA
KQLSADVRSLDLATEVIDMKDYDPDDQLADECSSKCVSVFLVSTYTDGQPTDNAEWFCKW
LEEASTDFRYGRTYLKGLRYAVFGLGNSLYAAHYNTVGKNVDKWLWMLSASRILTRGEGD
CNVAKSIHGSIQADFLAWKVKFLKRLRDLCQDDDNCCRKRKEGTSCIQTDGQEVEEGKNT
ALDNNNSEEELVESSSDEDVSSTSPSVLDVEDLGSLMSSVKQIPSDGGQVAKRSRKVARK
NQEGKEERREMITPALREALSRQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIQS
HRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPAEKILEEALEKHQNMIRQFRGVP
GVKSDRYEEGLTAQHCALSLVGEPIMYPEINRFVRLLHSRRISSFLVTNAQFPEEIRTLE
PVTQLYVSVDASTKDSLKKIDRPLFKDFWTRFLDSLKALAEKRQRTVYRLTLVKAWNVEE
ITAYSELVALGQPDFIEVKGVTYCGESSASSLTMANIPWHQEVVVFVQQLVNMLTDYEIA
CEHEHSNCLLIAHKKFKVNGKWHTWIDYDRFQDLARAYQESGGEKVFSSSDYTAQTPDWA
LFGASEQGFDPAETRFQRRNKGKDLSGC
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcaagcaaagcgtttgcaactatgcatggatttatcttcctcgccagttttttc
aaaacttctgcgacgacttcaaactcaaaagggttacactcttcccacagtgcctccgaa
aactatgccatgtacatatggcacaaccggttctatgtgtatgcagcctttgcgcttgcc
ttgacgctctgggtttcattcaagatgatcctgaagaagaaaagcttatcaaaggacgtc
agctcctgggtccaggaagctatgaagaatccagagggctgtgataaacgtgctgaagtt
cacgtgtcaggagtgaaaatcttctttggctcacagactggtacagctaaaggttttgca
aagcagctgtcagcagacgtgaggagtctggacctcgcgacagaggtgattgacatgaag
gactatgatccagacgatcagctggctgacgagtgcagcagcaagtgtgtgtctgtgttc
ctggtgtccacctacacggacgggcagcccaccgacaacgctgagtggttctgcaagtgg
cttgaggaagcgtccaccgacttccgctatgggaggacgtacctgaagggcctgcgctac
gccgtgtttggcctgggcaactccctttatgctgcccactacaacacagtgggcaaaaat
gtggacaagtggctgtggatgctgagtgcctctcggatcttaacccgcggcgaaggcgac
tgcaacgtggcgaaaagcatccatggcagcattcaggctgacttcctggcctggaaggtc
aagttcctcaaacgtctgcgggatctttgtcaggacgacgacaactgttgtaggaaacgc
aaggagggcacttcctgcatccagacggatggacaagaagtagaagaagggaagaacacc
gctctggataataacaattctgaggaggagctggtggagtcgagcagtgacgaagacgtc
tcgtcaacctccccctccgtgttggacgtggaagatctgggcagcctgatgagcagcgtc
aagcagattccttcagatggcgggcaggtagccaagcgctccaggaaggtggcgaggaag
aaccaagaggggaaagaagagcgacgggagatgataacgcccgccttgagagaagctctg
agcagacaagggtacaagctgattggaagtcactcaggtgtgaagctgtgccgttggacc
aagtccatgctgcggggccgaggcggctgctacaagcacaccttttatggcatccagtcc
caccgctgcatggagaccacaccgagcctggcctgcgccaacaagtgcgtcttctgctgg
agacatcacaccaatccggtgggcaccgagtggcgctggaagatggaccccgctgagaag
atcctggaggaagcactggagaaacatcagaacatgatccgccaatttcgaggcgtcccc
ggcgtgaagtcagatcgttacgaggagggtctgacagcgcaacactgcgctctgtccctg
gtgggcgagcccatcatgtaccctgaaatcaaccgctttgtgcgactcctccattcccga
cgcatttcaagcttcctggtcaccaatgctcagttccccgaggaaatcaggacgctggag
ccagtcactcagctgtacgtaagcgtggatgccagcaccaaggacagcctgaagaagatc
gacaggccactctttaaggacttctggacacgattcctggacagcctcaaggccctggct
gagaagaggcagaggacagtgtatcggttaacgctggtcaaagcttggaacgtggaggag
ataactgcctactcagagcttgtcgcattaggccagcccgactttatcgaggtcaagggt
gtgacgtactgtggtgaaagttcagccagcagtctgactatggccaacatcccatggcac
caggaagtggttgtgtttgtgcagcagctggtcaacatgctgactgactacgaaatcgca
tgcgagcacgagcactccaactgtcttcttattgcccacaagaagtttaaggtgaatggc
aagtggcatacgtggatcgactatgatcgtttccaggacctggccagggcctaccaggag
agcggcggtgaaaaggttttctcctcgtcggattacacggcgcagacccccgactgggcg
ctgttcggagcaagtgagcagggcttcgacccggccgaaacccgcttccagagacgcaac
aaaggcaaagatctctctggatgctga
DBGET
integrated database retrieval system
