Hippocampus comes (tiger tail seahorse): 109517559
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Entry
109517559 CDS
T04969
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Pathway
hcq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109517559 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hcq03041
]
109517559 (ddx46)
Enzymes [BR:
hcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109517559 (ddx46)
Spliceosome [BR:
hcq03041
]
Complex A
U2 snRNP components
U2 related factors
109517559 (ddx46)
Complex B
109517559 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
109517559
NCBI-ProteinID:
XP_019728342
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MGRESRHYRKRSTSPRRSGSRSRSRSADQRSKKEDPDRTNIYMKRSTSPRRSGSRSRSRS
ADKRSKKDDRDRSRREGSRSRDRSRERRRSRSRERKRSSSRGRARRSRSATPSKSRKTDE
KSKSKEKENLDLVSDRKKIKEEKEEEKVEDQQDFDQNKLEEEMRKRKERVEKWREEQRKK
AIENIGEIKKELEEMKQGKKWSLEDDDDDDEDVPVPMEATEEEEEEEAKDKGEVKESEVK
EEKMDEGEKDSDPPGEKQDEDDEIDIDPLDAYMEEVKQEVKKFNMGGVKGNDKKGATVTK
VVTVVKTKKGPHTHKKKGELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKILEPVDHG
KIQYEPYRKNFYVEVPDLARMSPEEVNTYRMELEGITVKGKGCPKPIKTWVQCGVSMKIL
NALKKQSYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEEAE
GPISVIMTPTRELALQITKECKKFSKSLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPG
RMIDMLGANSGRVTNLRRATYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFP
RAMEALARRILAKPLEIQVGGRSVVCSDVEQHVLVIEEDQKFLKLLEILGHYQEKGSVII
FVDKQEHADGLLKELMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLMVATSVAARGLD
VKQLILVVNYNCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQVRYSGDIIKALELSGSP
VPADLEQLWASFKDQQKAEGKSIKSSSGFSGKGFKFDETEHALANERKKLQRAALGLQDS
DDEDGALDIEEQIESMFNSKKRVKDLTAPGASAGGGGSANASAGSLSGLPGLGPTSAGNI
QKLEMAKRLALKINAQKNLGAEAQDVMQQATNAILRGGTIMTPSVSAKTIAEQLAEKINA
KLNYTPVEKLEEERQAAEQSETVKRYEEELEINDFPQTARWKVTSKEALQRIGEYSEAAI
TIRGTYFPPGKEPKEGERKIYLAIESANELAVTKAKTEITRLIKEELIRLQNSYQPTSKG
RYKVL
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcgagtcgcgacattacaggaagcgctcgacttctccgcggcgctccggtagc
cgctcgaggagtcgctctgcggaccaacgctccaaaaaggaagacccggaccgaaccaac
atatacatgaagcgctcgacttctccgcggcgctccggtagccgctcgaggagtcgctct
gcggacaaacgctccaaaaaggacgaccgggaccgaagccggagggaggggtcgcgcagc
cgagacaggagcagggaaaggaggagatccagaagccgagaacgcaagaggtctagcagc
agaggccgagccaggaggtcgcgctcggccacccccagcaagagcaggaaaactgatgaa
aagtcaaagagcaaagagaaagaaaaccttgatcttgtatcggaccggaagaaaattaag
gaggaaaaggaagaggagaaagttgaagatcagcaagactttgaccagaacaagctggag
gaggagatgaggaagcggaaggagcgtgtggagaagtggcgcgaggagcagcgcaaaaag
gccatcgaaaacatcggcgagatcaagaaggagctggaggagatgaagcagggcaaaaag
tggagcctcgaagacgacgacgacgatgacgaggacgtgcccgtcccgatggaggcaacc
gaggaggaggaggaggaggaggccaaagacaaaggagaggtcaaagaaagcgaggtcaag
gaggaaaagatggacgaaggcgagaaggactcggacccccccggcgagaagcaggacgag
gacgacgagatcgacatcgacccgctggacgcctacatggaggaggtgaagcaggaagtg
aagaagttcaacatgggaggcgtcaaaggaaacgacaagaagggagcaacagtaactaaa
gtggtgacggtggttaagaccaaaaaaggacctcacactcacaagaagaagggggagctg
atggagaacgaccaggatgccatggagtactcgtcggaggaggaggaagttgacttgcag
acggcgctgacgggattccagacgaagcagaggaagatcctggagcccgttgaccacggc
aagatccagtacgagccctaccgcaaaaacttctatgtggaggtgcccgatctggccagg
atgtcccccgaggaggtgaacacataccggatggaactggagggaattacggtgaagggg
aaaggctgtcccaagcccatcaagacttgggtgcagtgcggcgtctccatgaagatcctc
aatgccctcaagaagcagagctacgagaagcccacccccatccaggcgcaggccattccc
gccatcatgtcgggccgagacctcatcggcatcgccaaaacgggcagcggcaaaaccatc
gccttccttctgcccatgttcagacacatcatggaccagaggcctctggaggaagccgag
ggccccatctctgtgatcatgacgcccaccagagagctggcgctgcagatcaccaaagag
tgcaagaagttctccaagtcgctgggactcagggtggtgtgcgtctacggaggcacgggc
atcagcgaacagattgccgagctgaagcgaggcgccgagatcatcgtgtgcacgccggga
agaatgattgacatgttgggcgccaacagcggtcgcgtcaccaacctccgccgagctacg
tacgtggtgctggacgaggccgaccggatgttcgacatgggctttgagccgcaggtcatg
cgcatcgtggacaacgttcgtccggaccggcagacggtgatgttctccgccaccttcccc
agagccatggaggctctggctcggaggatcctggccaagccgctggagatccaggtgggc
gggcgcagtgtggtctgctctgacgtggagcagcacgtgctggtgatcgaggaggaccag
aagttcctgaagctgctggagatcctgggccactatcaggagaagggctcggtcatcatc
tttgtggacaagcaggagcacgccgacggtctcctcaaagagctgatgaaggcctcgtac
ccctgcatgtccctgcacggaggcatcgaccagtacgaccgcgacagcatcatcaacgac
ttcaagaacggcgcctgccgtctgatggtggccacgtcggtggcggcgcgaggcctcgac
gtcaagcagctcatcctggtggtcaactacaactgccccaaccactacgaggattacgtg
cacagggccggacgcacgggccgagcgggcaacaagggatacgcctacaccttcatcacg
gaggaccaggtccgatactccggcgacatcatcaaagccttggagctgtccggttctccc
gtcccggccgatttggagcagctgtgggcctccttcaaggaccagcagaaagcggagggc
aagtccatcaagagcagcagcggcttctcgggcaaaggcttcaagttcgacgagaccgag
cacgccctggccaacgagaggaagaagctgcagagggcggcgctgggactgcaggattcc
gacgatgaggacggcgctctggatattgaggagcagatcgagagcatgttcaactccaag
aagcgcgtgaaggacctgacggctcccggagcgtcggcgggcggaggcggctcggcgaac
gcttcggcgggctcgctgagcgggctcccggggcttggacccacgtctgccggaaacatc
cagaagctggagatggccaagcggctggctctcaagatcaacgcccagaagaacctggga
gctgaagctcaggacgtgatgcagcaggccaccaacgccatcctgcgcggcggcaccatc
atgacgccgtcggtgtcggccaagaccatcgccgagcagctggccgagaagatcaacgcc
aagctcaactacacgccggtggagaagctggaggaggagcggcaggcggccgagcagtcc
gagacggtcaagcgctacgaggaggagctggagatcaacgacttcccgcagacggctagg
tggaaggtaacgtccaaggaagccctgcagaggatcggggagtactcggaggccgccatc
accatcagagggacctacttccctccgggcaaggagcccaaggagggcgagcgcaagatc
tacttggccattgaaagcgcaaacgagctggctgtgacgaaagccaaaacggagatcaca
cgtcttatcaaggaagaactcatcagattacaaaactcctaccagccgaccagcaaagga
cgatacaaagtgttgtaa
DBGET
integrated database retrieval system
