Hippocampus comes (tiger tail seahorse): 109518536
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Entry
109518536 CDS
T04969
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcq04121
]
109518536 (trim16)
Ubiquitin system [BR:
hcq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109518536 (trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
Baculo_p48
SHE3
BshC
Prominin
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
109518536
NCBI-ProteinID:
XP_019729980
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MEPARDEPQQRDAASQRGPEGDSQGAPRGEPQSGSEGVPEGRPQAEEAPDKHLVEEQQQQ
QEEATEEEEDVLDADVDAVVCDSCMERPRRALKSCLTCLVSYCEAHLRPHLENAKFHNHR
LVAPLRDIERRTCEIHKWPLELFCRADACCLCRDCLADDHRGHDTVPVAQARRQLERELK
DKRGEMTKTLTAAENAMDKLQLNTVSIQNSVTQVRAVVRAEFEQLRTAVEKAEREVSEIL
EAEEKQALGQAEGIRAHLEQRCGELNKTRAQVDKLSRNKNDVDFLQEYCEWKKEASDISL
PGVYIGLMDGLKSISHVIAEATQELCATLATSYMDKVRETCNTDNVGIKTTVQTIVAARQ
GMTLPEPVTRADFLKYGAQVSFDADTAHVFLRLTEDNRKVTNTTPWQHPYPDLPERFQDW
RQVLAVESFYLGRHYFEADIGGEGTHVGLTYKSIQRKGGDSSGCITANNFSWCLHWNGRA
FSAWHSGVETPLSAGNFTRVGVYVDSAGGLLAFYGVDETMTLIHRYEAEFLEPLYPAFWL
PKKENVVVLVTPGEALPLKSPSPPTSPKNGVPPP
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgcgcgagatgagccccagcagcgggacgccgcctctcaacgaggtcccgaa
ggagactcccaaggagcgccccggggagagccccaaagtggctcagaaggggtcccagag
ggacgcccgcaagcggaagaagctcctgacaagcacttggtggaggagcagcagcagcag
caggaggaggcaacagaggaggaggaggacgtcttggacgcggacgtggacgcggtggtg
tgcgactcgtgcatggagcgtccgcggcgggcgctcaagtcgtgcctgacgtgtttggtg
tcgtactgcgaggcgcacctgcgcccgcacctggagaacgccaagttccacaaccaccgt
ctggtggcgccgctgcgcgacatcgagcgccgcacctgcgagatccacaagtggcccctg
gagctcttctgccgcgccgacgcctgctgcttgtgccgcgactgcttggccgatgaccac
cgcggccacgacaccgtccccgtcgcgcaggcgcgacgccagctcgagagggagctgaag
gacaaacgtggcgagatgaccaagacgttgacggcagcggagaacgccatggacaagctg
cagctcaacaccgtctccatccagaactcggtgacgcaggtgcgcgccgtggtccgggcc
gagttcgagcaactgcggacggccgtggagaaggccgagagggaggtgagcgagatcctg
gaggccgaggagaagcaggcgctcgggcaggccgagggcatccgcgcccacctggagcaa
aggtgcggcgagctgaacaagacgcgggcccaggtggacaagctctcgcgcaacaagaac
gacgtcgacttcctgcaggagtattgcgagtggaagaaagaggcgtctgacatctcgctt
cccggcgtctacatcgggctgatggacggcctcaagtcgatcagccacgtgatcgccgag
gccacgcaggagctctgcgccacgctggccacgtcctacatggacaaggtcagggagacg
tgcaacactgacaatgttggaattaagacgacggtgcagaccatcgttgcagccagacag
ggcatgacccttcccgagccggtcacgcgggccgatttcctgaagtacggcgctcaggtg
agctttgacgccgacacggctcacgtcttcctgcgtttgaccgaagacaaccgcaaggtg
accaacaccacgccctggcagcatccctaccccgacctccccgagcgcttccaggactgg
cggcaggtgctggcggtggagagtttctacctgggccgccattactttgaggcggacatc
ggcggcgagggcacgcacgtgggcctcacctacaagagcatccagcgcaaaggcggcgac
agcagcggctgcatcaccgctaacaacttctcctggtgcctgcactggaacggccgcgcc
ttctcggcctggcacagcggcgtggagacgcctctcagcgcggggaactttacccgagtc
ggggtgtacgtggactcggccggaggcctcttggccttctacggcgtggacgaaaccatg
acgctcatccaccgctacgaggccgagttcctggagccactctatcccgccttctggtta
cccaagaaggagaatgtggtggttttggtgacacctggcgaggccttgcccctcaagagt
ccctctccgcccacgtcccccaaaaacggcgtccctcctccgtaa
DBGET
integrated database retrieval system
