Hippocampus comes (tiger tail seahorse): 109525923
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Entry
109525923 CDS
T04969
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hcq01002
]
109525923 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcq04121
]
109525923 (usp47)
Enzymes [BR:
hcq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109525923 (usp47)
Peptidases and inhibitors [BR:
hcq01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109525923 (usp47)
Ubiquitin system [BR:
hcq04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109525923 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
109525923
NCBI-ProteinID:
XP_019742377
UniProt:
A0A3Q3D3N3
LinkDB
All DBs
Position
Unknown
AA seq
1363 aa
AA seq
DB search
MEMVPSEENQFVCKEIQEAAEEPRVLCIIQDITCAKTVNARLTFKLPASTALSKLYEDVA
HKAGYVNGSFELAWGNTQDMTPLEHSGEVSLLDSGFEPGGKRNFLQLTDKDGEQPQVASD
ESGAADSSGLDDGSQERFIGPLPRDGTVGCSGDCRSPSYSYTSILNKSETGYVGLVNQAM
TCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTD
VTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECG
YESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARK
GLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDSMTFPEELDMSPFIDVEDEKSPQTESCT
DSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTASAERVLKPKSLPSFELFSVMVHSGS
AAGGHYYACIKSFTDGQWYSFNDQHVSKITPEDIRKTYGGSSGSRGYYSSAFASSTNAYM
LIYRLKDPSRNAKYLAVDDFPEHLKSLVEKEKESEEQEKRQREIERNTCKIKLFCMHPSK
TMVESKLEVHKDKTLTEATEMAYKLMELEETVPLDCCRLVKYDEFHEYLERSYEGEEDTP
MGLLLGGVKSSYMFDLLLETRRPEQTFLPYKPGEVMVKVHVVDLRTETVAPPISVRAYLN
QTITEFKQLIAQATSLSAETMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKIFVESSES
ADHQVAFTDSLLWRLLDRHGNTIRLLVLLPEQSPGTLGSRTICQKLGSDSDVPFEGSKGN
RKSVEAILEESTEKLKNLSLQQQQRSSTGDSQKSSDTSYFEHIESLSQEVDSNSPCVAAD
NRDLENRIGGTPGCRVSAPSDPENHFACEERSDSEVNNDRSTSSVDSDILSSSHSSDTLC
NADNGPIQLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDDNGKAKSEARFL
YFRTEPYFQDDSACNSQKCLVVHVDKRITLAAFKHNLEPYVGVTSAQFKVFRVYANNQEF
ESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEQEPCKFLVDTVFAKGMTV
RQSKEELLPVLKEQCKLDLSIDRVRLRKKTWKNPGTVFLDYHVYEEDISISSNWEVFLEI
LTEHEKMKSMSQLAVLTRRWSPSTMKLGTFQEVILESSNVEELKEKLSEISDIHLDKLEF
AKGRGTFPCDISVLEIHQDLDWNPKVSALNMWPLYICDDGAVVFYRDSTEELMELSEDER
SELMKKESSRLLKTGHRVIYSPRKEKALKIYLDGGPAKDPGQD
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaggagaaccagttcgtatgcaaagagatccaagaagccgca
gaggagcccagagtgctgtgtataatccaggacatcacctgtgccaagacggtcaatgcg
aggttgaccttcaaactgccagcgtccaccgccctctccaaactctatgaagatgttgcc
cacaaagcaggatatgtcaatggctcctttgaattggcctggggaaacacccaagacatg
acacccttagagcacagcggagaagtgtcgcttctggattctgggtttgagcctggtggt
aagaggaatttccttcagctaacagacaaagatggagaacaaccacaagtggcttcggat
gagtcaggggcagcagatagcagtgggctggatgatggctcccaggagcgatttattggg
ccccttcccagagacggtaccgttggctgcagtggcgactgccgtagcccctcttactct
tacacctccatcctcaacaaatctgagacgggttacgtgggtttggtcaaccaagcaatg
acctgttatttgaacagtctcttacaaacactgttcatgaccccggagttcagaaatgca
ctgtacaactgggagtttgaggaatctgaagaggacccagtcacaagcattccctaccag
ctgcaaagactgtttgttcttctccagacaagcaagaaacgtgccatagagaccaccgat
gtgacgcgcagctttggatgggacagtagtgaagcttggcaacaacatgatgtgcaagaa
ctttgcagggtcatgttcgatgccctggagcaaaagtggaagcagaccgaacaggctgac
ctgatcaatcagctgtaccaaggaaagctcaaagattacgtacgctgtctggagtgtgga
tacgagagctggaggattgatacttacctggatatccctcttgtaataagacccttcggg
gccagtcaggcctatggcagtgtggaggaggcattgcaggctttcattcagccggaaact
ctagatgggcccaaccaatacttctgcgaacgctgcaaaaagaaatgtgatgcccggaag
ggtttgaggtttctgcattttccttacctgctgacgctgcagctgaagcgatttgatttt
gactataccactatgcatcgcatcaagctcaatgacagcatgactttcccagaggaactt
gacatgagtccattcattgacgtcgaggatgagaagtcgcctcagacagaaagctgcacc
gatagtggagcagagaatgaaggcagttgccacagtgaccagatgagcaacgatttctcc
actgacgattgtgtggatgaaggcatttgcctggacagcactgccagcgcagagagggtg
ttgaaaccaaagagtttgccgagctttgagctgttctccgtcatggtccattcgggaagt
gccgcgggtgggcactactacgcctgcattaaatccttcactgatggccagtggtacagt
ttcaatgaccagcatgtcagcaagatcaccccagaggatatcagaaagacttacgggggg
tcctcagggagcagaggatattattccagtgcctttgcaagctctacgaatgcttatatg
ctgatttatagattgaaagatccctcaaggaatgcaaagtatttagctgtggatgacttc
ccagagcacttaaagagtttggttgaaaaggaaaaagagtcggaagagcaggagaagaga
cagcgagaaatcgagcgaaacacttgcaagatcaagcttttctgcatgcacccttcgaag
acgatggtcgagagcaagctggaggtgcacaaggacaaaactcttacggaagcaacagaa
atggcctacaagctgatggagctggaggaaacggtccccttggactgctgtcgcctggtg
aagtatgatgagttccacgagtacctggagcgctcctacgagggcgaagaggacacgccc
atgggccttctcctcggaggggtcaagtcctcttacatgttcgacttgctgctggagacc
cgccggccagaacaaacgttcctgccttacaaacctggagaggtgatggtgaaggttcat
gttgtggatctgagaaccgaaacagtcgcccctcccatcagtgttcgggcttacctgaac
cagaccatcactgaattcaagcaacttattgcacaggctacaagtctctcagcagaaaca
atgcgcgttgttctggagcgttgctacaatgacctgcggctcctctatgttccaaacaag
acactgaaagcggaaggtttcttcagaagtaacaaaatttttgtggagagttcagagtct
gctgatcatcaggtcgcattcactgactcgctgctgtggaggcttttggatcgccacggg
aatactattcgactactcgtcttgctacctgaacagtctcctggcactttgggcagcaga
actatttgccaaaagcttggcagtgactcggatgtgccctttgaagggtcaaaaggcaac
aggaaatcagtggaggctatccttgaggagagcacagagaagttaaagaacctgtctctg
caacagcagcaaagatccagcaccggcgacagccagaaaagctctgacaccagttacttt
gaacatatcgaatccctgagccaagaggtggactcaaattcaccctgcgtagccgcagac
aacagagacctcgaaaaccggatcgggggcacccccgggtgcagggtcagtgccccatct
gacccagaaaaccactttgcctgcgaggagcgctcagactctgaggtaaacaatgaccgc
agcaccagctcagtggacagcgacatcctgagctcgagtcacagtagtgacacgctgtgc
aatgcagacaatggtccaatccagctggccaatggcttggactcgcacagcatcactagt
agccgtcgctccaaagcccacgagggcaagaaagagacctgggacaccgcggaggaagac
tcagggacggacagcgagtatgacgacaacgggaaggctaaatcggaagcccggttcttg
tacttcaggacagaaccttatttccaggatgactcggcctgcaattcacaaaaatgttta
gtggttcatgtggacaagaggataacgttggcagctttcaaacacaatctggagccgtat
gtcggcgtcacctcggcccagtttaaagtgtttcgggtttacgccaacaaccaggaattt
gagagtgtacggctcaacgaaacactgtcgtcattctctgacgacaacaagataaccatt
cgacttgggagagccctgaaaaagggtgaataccgagtaaaagtgtatcaactgctagta
aatgaacaagagccctgcaagtttcttgtcgacacggtgtttgcaaaggggatgactgtc
agacagtcgaaagaggagctgctgcctgtcttgaaagagcagtgcaagcttgacctcagc
attgaccgggtgcgtctcaggaaaaagacatggaagaatccgggtacagtatttctggac
taccatgtttatgaagaagacatcagcatctcctccaactgggaggttttcctggaaatc
ctcactgaacacgagaagatgaagtccatgtcgcagctggctgtcctgacccgcaggtgg
agcccgtccaccatgaaactgggtaccttccaggaagtgattctggagagcagcaatgtt
gaggaactcaaggagaagctcagtgaaattagtgatattcatcttgataagctggagttt
gcaaagggtcgaggaacgtttccctgtgacatttctgtgctggagatccatcaggatttg
gattggaaccccaaggtgtcggcattaaacatgtggcccctgtacatctgtgatgatggg
gccgtagtcttctacagagatagcaccgaggaactaatggagctatcagaagatgagcgc
agtgaactcatgaagaaggaaagcagccgcctgctcaagactggacatcgggtcatctac
tcgccgcgaaaagagaaggccctcaagatctacctagatgggggtccggccaaggatcca
gggcaagactga
DBGET
integrated database retrieval system