Hippocampus comes (tiger tail seahorse): 109530678
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Entry
109530678 CDS
T04969
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcq03021
]
109530678 (chd1)
03036 Chromosome and associated proteins [BR:
hcq03036
]
109530678 (chd1)
Transcription machinery [BR:
hcq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
109530678 (chd1)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
109530678 (chd1)
SLIK complex
109530678 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
109530678
NCBI-ProteinID:
XP_019750138
LinkDB
All DBs
Position
Unknown
AA seq
1796 aa
AA seq
DB search
MAGRSEDESVSNSSGESSNSDDESGSGSASGSGSGSSSSSSSSSSQSGSSDSGSGSDSGS
QSDSETEKSKEKIDPPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQRQSSSNSGS
DEDSSSSDDSDSSSGSKRRRNSGSSDSGSGSGSGSGSGSDSSADNNSDETVSDYEPSQTT
KSRKPPTKMNFRNGKKSSSLKKKAQKCSSSEDEDDNYKKVVAAGPRRQATVNISYKEDEE
LKTDSDDLVEVLGEDVPQPEEDEFETLERVMDSRIGRKRAVGSVTTVYAVEADGDPNANF
NPNKEAGEIQYLIKWKNWAHIHNTWETEETLKVQNVRGMKKLDNFKKKDGEKKKWLKTAS
PEDVEYFNCQEELIDDLHSQYQLVERIIGHSNQKSAAGFPDYLCKWQGLPYSECSWEDGA
LIAKKFQKCIDDYMSRNQSKTIPSRDCKVLKQRPRFAPMKKQPHYIGGDGLELRDYQLDS
LNWMAHSWCKGNSCILADEMGLGKTIQTISFLNYMFNEHQLYGPFLLVVPLSTLTSWQRE
IQLWAPQMNIVVYLGDISSRNMIRTHEWMHVHSKRLKFNILLTTYEILLKDKFFLGNVNW
AFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFHSW
EMFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQYYKW
ILTRNYKALSKGIKGSTSGFLNIMMELKKCCNHCYLIKPPEDHEFLNRAEALQQLIRSSG
KLILLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLRSRQFLFQRLDGSIKGEMRKQALD
HFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKRQVN
IYRLVTKGSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGTAPSSSAPFNKEELSAI
LKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFTMME
EEEIDMDSERSQRSWDDIIPEEQRRRMEEEARQKELEEIYMLPRMRNCAKQISFNANEGR
RQGRSRRYSGSDSDSHSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKKFGGPLER
LDAIARDAELVDKSEHDLKRLAETVHNGCVRTLRENPCGPEKTSGGRRGKVKGPTFRISG
VQVNAKLVISHEEELAPLHKAIPADPEERKKYMIPCHSKAAHFDLEWGKEDDSSLLIGIY
EYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQKQA
GSVNSRKRKPRSKKRETMKSTPIDEMMKSASSDPPSDKRSDDEDEIEEEKEEMPVKAPSG
RSRTDRETVKEENQEEEEDEEEEEEEEEDEAQQDDGSSSGEREYKEELKKDCKKEKKEDS
WDSKDNKESKERKEVKPLEAVHKQEDNMEKTESKAEVRERLKKAPDVPVHITASGENVPL
SEESEELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECL
KEYSNPDLIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQAMEQNTRSANTIG
FKHTDIERLRDNSHQDDSSRDSYSSDRHQPSARYHDSSKEKHSSEAPRKTAESRKRPYSS
FSNGKDHRDHYRPDSRDRDRQDRHYSDGKQRKLEELRSSKDHRPDLKDLSHSDHRSSYRY
HSDWQTEQRASASGPRSPRDQPSPYDSRSPLGHRSPFDYSSDHKSTPEQIWSGRKT
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacgcagtgaggatgaaagtgtaagcaacagcagtggggaatcaagcaattct
gatgatgaatctggttctggatcagcatctggatctggctcaggttccagttcaagctcc
tcaagcagcagcagtcagtcagggagcagcgactcaggaagtggctcagactctggcagc
cagtcggattcagagacagaaaaatccaaggaaaagattgaccctccaaacaagtcaaac
attgatggcgctgagttttggaagtccaacccaagtatcttagcagtccaacgatctgct
atgctcaggaaacagcagctccagcagcaacagagacaaagctcctcaaatagtggttct
gatgaggactcatcaagtagtgatgactcagactcctcaagtggatccaaaaggagaaga
aattctggctcttcggattctggatcgggttctggatcaggaagcggctctggatcagac
tcatctgctgataacaacagtgatgaaaccgtttcagactacgagcccagtcaaacgacg
aaaagcagaaagcctccaactaagatgaattttcgaaatggcaagaagagcagctctctg
aaaaagaaagcccagaaatgttcgtcttctgaggacgaggatgataactacaagaaggtt
gtcgctgctggtccacggcggcaggccactgtcaacatcagctataaggaagatgaggaa
ctgaaaacggattcagatgacctcgtggaagttctcggtgaggatgttcctcaacctgag
gaagatgagtttgaaacacttgagagagtgatggatagcagaatcggaaggaaaagagcc
gtgggaagtgtgactacggtatatgctgtcgaagcggatggagacccaaatgccaacttt
aaccccaataaggaggcaggggaaatccagtacctaataaagtggaagaattgggcgcat
attcacaacacttgggaaacagaagagacccttaaggtgcaaaatgtcagaggtatgaag
aagctggacaattttaagaagaaggatggggagaaaaagaaatggttgaagacagcatca
cccgaagatgttgagtatttcaattgtcaggaagaactcatcgatgacctgcactctcag
taccaacttgtggagaggatcataggccattctaaccaaaagtcagctgctggttttccg
gactacctgtgcaagtggcagggtttgccctactcagaatgtagctgggaagatggagcc
ctgattgccaagaagtttcaaaaatgtattgatgattacatgagcagaaaccaatcaaag
accattccatccagagattgcaaggtgctgaaacagagaccaaggtttgctccaatgaaa
aagcagccacattacataggaggtgatggactagagctcagagactatcagttggacagt
ttaaactggatggcgcactcgtggtgcaaaggcaacagctgcatccttgctgatgagatg
ggtttggggaagaccattcagaccatctctttcctcaactatatgtttaacgagcaccag
ctatacgggcccttcttgttggttgtacccctttctacattaacctcgtggcagagagaa
atccagttgtgggctcctcagatgaatattgttgtctaccttggggacataagcagtagg
aatatgatcaggacacacgagtggatgcatgttcattccaagaggctgaaattcaacatc
ctcctcactacgtatgagattcttctgaaggacaagttttttttgggcaatgttaactgg
gctttcatcggtgtggacgaggcacatcgactgaagaatgatgactccctcctctacaag
actatgattgacttcaagtccaatcacaggctcctgatcacaggaacaccactgcaaaat
tccctcaaagagctctggtccctgctgcatttcattatgcctgaaaagtttcactcgtgg
gagatgtttgaggaggaacatggtaaaggacgggattctggctacaccagtctgcacaaa
gaactggaaccttttcttctacgcagagtcaagaaggatgtggagaaatctctcccagcc
aaagtagagcagatcctcagagtggaaatgagcgctatccagaaacagtattacaaatgg
atcctgaccaggaactacaaggctctcagtaaaggtatcaaaggaagcacatcgggtttc
ctaaacatcatgatggagttgaagaagtgctgtaaccactgttacctgatcaaacctcct
gaggaccacgaattcctgaacagagctgaagcattacagcaacttatccgcagcagtggg
aaactgattttattggacaaattgctggttcgtttgaaagagcgaggtcacagagttctc
atcttctcccaaatggttcggatgctggatatcctggctgagtaccttcgaagccgacag
ttcctctttcagcgattagatggctccatcaagggtgagatgaggaagcaagcattggat
cattttaatgctgatggttcagaggatttctgtttcctgttatccacacgtgctggtggc
ctcggtatcaatttggcttcagctgacacagttgtcatctttgactcagactggaacccc
caaaatgatcttcaagcccaggccagagcccacaggattggacaaaagagacaagtgaac
atctatcgtttggtgacgaagggctctgtagaagaggaaataatagaaagagcaaagaag
aagatggtgttggatcaccttgtcattcagagaatggacacaacgggaaaaactgtcctc
cacactggcactgctccctcaagttcagcaccattcaacaaggaagagttgtctgcaatc
ctgaaatttggtgctgaggagcttttcaaagagccagaaggcgaagagcaggagcctcag
gaaatggatattgacgagattctcaaaagagctgagactagagaaaatgatcccggaccc
tccacagtgggagaagaactgctgtctcagtttaaggttgcaaacttcaccatgatggaa
gaagaggaaatagacatggactccgagcgcagccagcgcagttgggatgacatcatccct
gaggagcaaaggaggaggatggaggaggaggcgcgtcagaaggagctcgaggaaatctac
atgctgccgcggatgaggaattgtgccaaacagataagctttaatgctaatgagggcaga
agacagggcaggagcaggagatactcagggtccgacagcgactcccactcggatcgaaag
aggccaaagaaacgcggtcggcctcggaccattccacgggaaaatatcaagggcttcagc
gacgctgagattcggaggtttgtcaaaagttacaagaaatttgggggaccgctggaacgg
ttggatgctattgctcgtgatgccgaacttgtggacaagtctgaacatgacctgaaacgc
ctggctgaaacggttcacaacggctgtgtgagaacattacgagaaaacccctgtggacct
gaaaaaacgtcagggggcagaagaggcaaggtaaaagggcccacattcaggatctctggt
gttcaagtcaacgccaagcttgttatttctcatgaggaagaactcgctccacttcacaag
gccatccctgccgacccagaggagagaaaaaagtacatgattccatgccactctaaggct
gcacactttgacctcgagtgggggaaagaggatgactccagcctgctaataggaatctat
gagtacggttatggcagttgggagatgatcaaaatggacccagacctcaatctcacacac
aaactcctaccagatgaccctgataagaaaccccaagccaagcagctccagaccagagca
gactacctcattaagttactgagcaaggaccttgccaaaaaagaagctcagaaacaagca
ggctcagtcaattctcgaaagaggaagccaagatccaaaaagagagaaactatgaagtca
actccgatagatgagatgatgaagagtgcatcctcagatcctccatcggacaaaagatcg
gatgatgaggatgaaatcgaggaggaaaaggaggagatgcccgtgaaggctccgagcgga
cgaagcagaacagacagagagaccgtaaaggaagagaatcaggaggaggaggaagatgag
gaggaggaggaggaggaagaagaggatgaggctcaacaggatgatggctcttcatctggt
gagagggagtataaagaggagctaaagaaagactgtaaaaaggagaaaaaggaggacagt
tgggacagtaaagacaacaaggagtcaaaagagagaaaagaagttaaacctttggaagca
gtccataaacaagaggacaacatggaaaagactgaaagcaaagccgaggtcagagaacgg
ctaaagaaagcacctgatgtgccagtccacataacagcaagtggagagaatgttccattg
tctgaggagtctgaagaactggaccagaaaaccttcagcgtgtgtaaagagagaatgcgg
ccggtgaaagcagcacttaagcagctggaccgaccggagaagggtctctctgagcgtgag
cagctcgaacacaccaggcaatgtctcatcaagattggagaccacatcacggagtgtctc
aaggagtattccaatcctgacctcatcaaacaatggcgaaaaaacctgtggatatttgtt
tcaaaattcaccgagtttgacgccaggaaattgcataaattatataagcatgccatcaag
aaaagacaagagaacgctcaggccatggagcagaacacaaggagtgcaaacacaatcggt
tttaaacacacagatatcgaacggctgagggacaactctcaccaggatgacagcagtcga
gacagttatagctcagacaggcatcagccatcggcgcgttatcatgacagcagcaaggag
aaacacagctcagaggcccccaggaaaactgcagaatccagaaaaaggccctactcctca
ttcagcaacggcaaagaccaccgagaccactaccgaccggacagcagggatcgagacaga
caggacagacattacagcgatggtaagcaaaggaagctggaggagttacgctccagcaaa
gaccaccggccggacctgaaggatctctcccattcggaccaccgctcgtcttaccgctac
cactcagactggcagacggagcagcgggcctcggcaagtgggccccgttctccccgcgac
cagccctcgccctacgactcccgctcgccgctgggccaccgctctcctttcgactattcg
tccgaccacaagagcacaccggagcagatctggagcggccgcaagacataa
DBGET
integrated database retrieval system
