Hymenobacter cellulosilyticus: MUN79_06190
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Entry
MUN79_06190 CDS
T09398
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
hcu
Hymenobacter cellulosilyticus
Pathway
hcu02020
Two-component system
hcu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hcu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MUN79_06190 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MUN79_06190 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcu03021
]
MUN79_06190 (rpoN)
Transcription machinery [BR:
hcu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MUN79_06190 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
Thioredoxin_4
SF3b1
LacI
Phage_GPL
Motif
Other DBs
NCBI-ProteinID:
UOQ73523
UniProt:
A0A8T9QFA6
LinkDB
All DBs
Position
complement(1252043..1253623)
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AA seq
526 aa
AA seq
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MQRLDMKQLLSQKLSPQQIQFIKLLQIPTAELEARIKEELEVNPALEEGDENTDDEVEDQ
ERDDDADDSDDYDDPDSEFDSDDNTLDEDFDTGSEEQPEVEVPTKDDPADTTKDNEELDL
GDYLNDDEIAGYKMQGDGPGEPEDDREMPLADTGASLTDSLLDQLGFADLDEKQEAIGRQ
LIGSIDNDGYIRRDLSAIANDLAFSQNIEADEAEIEGVLHLIQSFDPAGIAARDLQECLL
LQLERRHQDEVTEHAERILSETFDEFTKKHYQRIQQKLDLEDDELKEAIALILKLNPKPG
GTGPVGMGKVQYIIPDFILTNDNGVFNLTLNARNAPDLRVAPAYTEMFQTYDKAAKKDKK
MKEAVTFVKQKLDSARWFIDAIKQRQQTLLRTMDSIVRYQHDFFLEGDESKLRPMILKDI
ATEIGMDISTVSRVANSKSVQTEFGIYPLKYFFSEGIATDSGEDASSREVKHILKEIIEG
ESKKRPLSDDKLEKMLNARGYNIARRTVAKYREQLNIPVARLRKEL
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagacttgacatgaagcagcttctctcgcagaagctgtctccccaacagatacag
ttcattaagctgctgcaaattccgacagcagagctggaggcgcgcatcaaggaagagctg
gaggtaaacccagccctggaagaaggcgacgaaaacaccgacgacgaggtggaagaccag
gagcgcgacgatgacgcggacgactccgacgactatgacgacccggattcggagttcgat
tccgacgacaacaccctggacgaagactttgataccggcagcgaggagcagcccgaagtg
gaggtgcccaccaaagacgacccggcagatacgaccaaggacaacgaggagctggacctg
ggcgactacctcaacgacgacgaaatagcgggctacaagatgcagggcgacgggcccggc
gagcccgaggacgaccgggaaatgcccctggccgacaccggcgcttcccttaccgactct
ctgctcgaccagctgggctttgccgacctcgacgaaaagcaggaagccattggccgccag
ctcattggttccatcgacaacgacggctacatccgccgcgacctgtcggctattgccaac
gacctggccttctcccagaacatcgaagccgatgaggctgagattgagggcgtgctccac
ctgattcagagcttcgacccggccggtattgccgcccgcgacctgcaggaatgcctgctg
ctccaacttgagcgccgccaccaggacgaggtgaccgagcacgccgagcggattctaagt
gagaccttcgacgagtttaccaagaagcactaccagcgtattcagcagaagctggacctg
gaagatgatgaactcaaagaggccattgccctgattctgaagcttaaccccaagcccggt
ggcaccgggcccgtgggcatgggcaaagtgcagtacatcatccccgacttcattctgacc
aacgacaacggcgtgttcaaccttacgctgaacgcgcgcaacgctccggacctgcgggtg
gccccggcctacaccgagatgttccagacctacgataaggcggccaagaaggacaagaag
atgaaggaggccgtgaccttcgtcaagcagaagcttgactcggcccgctggtttattgac
gccatcaagcaacgccagcagaccctgctgcgcaccatggactccatcgtgcgctaccag
cacgacttcttcctagaaggcgacgaaagcaagctgcggcccatgattctgaaagacatt
gccaccgaaatcggcatggatatcagcaccgtgagccgggtagccaactccaagtcggtg
cagaccgagttcggcatttaccccttgaagtacttcttctccgagggcattgctaccgac
tcaggcgaagacgctagctcacgggaagtgaagcacatcctgaaggaaatcatcgagggg
gaaagcaaaaagcggccactgagcgacgacaagctggaaaaaatgctcaatgcccgtggc
tacaacattgcccgccgcacggtggctaagtaccgggagcagctcaatattccggtagcc
cgcctgcgcaaggaactgtaa
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