Heliorestis convoluta: FTV88_1075
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Entry
FTV88_1075 CDS
T06277
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
hcv
Heliorestis convoluta
Pathway
hcv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FTV88_1075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcv03400
]
FTV88_1075
Enzymes [BR:
hcv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
FTV88_1075
DNA repair and recombination proteins [BR:
hcv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
FTV88_1075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
QGG47227
UniProt:
A0A5Q2MXH4
LinkDB
All DBs
Position
1059876..1060382
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AA seq
168 aa
AA seq
DB search
MVFDLDPHESQSFETVVEVAWLVKEALDSFGLTSYPKTSGRSGLHIYVPLKPQYSYDTAR
QCAIVLARFIEKIDCRVTLERSIERRGQALYLDCWQIGKGKTLASIYSPRPLPGAPVSTP
LAWSEVKSNVDPQAFNLTSVVDRVKQKGDLFASLLTEENDLTALLELL
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcgacctcgatccccatgagagccagtcatttgagaccgtcgtagaagttgcc
tggctcgtcaaagaagctttagatagttttggactgacttcgtaccccaaaacatcggga
cgatcgggcttgcatatctatgtgccccttaagccccagtatagctatgatacagcaagg
caatgcgctatcgtcttagcccgatttatagaaaagatagactgccgcgttaccctagag
cgctcgattgaaagaagaggacaagctctctatctcgattgctggcagataggaaaggga
aaaaccttggcttctatctacagtcctcgaccccttcctggtgcacctgtctcaacacca
ttagcgtggtcagaagtgaaaagcaatgtagatccacaagctttcaatctaacctcggtc
gtagatagagtaaagcaaaaaggcgatctttttgcatctcttttgacagaagaaaatgac
ttgacggctttgttggagcttttgtag
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