Hymenobacter canadensis: O3303_00585
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Entry
O3303_00585 CDS
T09156
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
hcw
Hymenobacter canadensis
Pathway
hcw01501
beta-Lactam resistance
hcw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
O3303_00585
01503 Cationic antimicrobial peptide (CAMP) resistance
O3303_00585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcw02000
]
O3303_00585
01504 Antimicrobial resistance genes [BR:
hcw01504
]
O3303_00585
Transporters [BR:
hcw02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
O3303_00585
Antimicrobial resistance genes [BR:
hcw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
O3303_00585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
WBA42068
LinkDB
All DBs
Position
complement(126737..129829)
Genome browser
AA seq
1030 aa
AA seq
DB search
MSLSSTSINRPVLAIVMSLVIVIFGVIGFRYLSIREYPSVDPPIITVSASYTGASADVMQ
GQVTEPLEEALNGIAGIKNLTSNSRDGRTQITVEFDLDADLETAANDVRDKVSGAQGRLP
RDIDPPIVSKANADSQPIVMTYLSSSKRTLLELTDYANNALKERLQTIPGVSEVRVYGER
KYSMRLWMDPVKLSALGVSPVDVQAALTRENVELPSGSVQGQNTQLTLRTMGRLTSVEDF
NNLIIRKDASSLVRLSDIGYAELYPENDQTIFKVNGVPMVGLAVIPQPGSNQIDIADEFN
KRIELYGKDLPKDLVLKPGFDNSVFIRKSITEVEHTIIEAFVLVVIIIFLFLRDWRSTLI
PVVAIPVSLVGIFFVMYLLDFSINVLTLLAVVLAIGLVVDDAIVVLENIYSRIEEGEDPK
TAAIKGSEEILMAVISTTVVLAAVFLPVVFLTGITGRLFREFGIVVAGSVLISAFVSLTL
TPMMCSVLLKRQEKHNWFYRKTEPFFQKMIGGYQSSLQTFLRNRWMAWLVVLGTGVGIWF
FMKAIPSELAPVEDRSRVNVNATGPEGASFEYMDAYMNQITKMAMDSAGSSLSSVFAVTS
PGFGGGSNSGTARVLLLDADQRPRNQDQVAAGLSAGVKKLTAARTSVSQDQSIGGGGGGG
GGLPVQFVIQTQDFEKLRAAVPKFLDAARQDPTFQFVDVNLKFNKPELRVNIDREKAQSL
GVSVQSISQTLQSGLSGQRFGYFIREGKQYQIIGQVAREDRNQPLDVRLLSVKNADGQLV
QLDNVIRLTESSTPPQLYRFNRYNSATFSASLAPGKTLGDGIAAMQSIAEKNLDDTFSTE
LSGASRDFQESSSSLVFAFGLALVLIYLVLAAQFESFRDPVIIMVTVPLALSGALLSLWY
FNQTLNLFSQIGIIMLVGLVTKNGILIVEFANQQVENGKDYMTGLIEGATARFRPILMTS
LCAILGILPIAIATGAGALSRRAMGIGVVGGLFFATGLTLYVVPVMYSYFATAKKHSQKQ
EAAKKKAVTA
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgagcctttcctccaccagcatcaaccgccccgtcctcgcaatcgtgatgagcctcgtc
atcgtgattttcggtgtgattgggtttcgctacctcagcatccgggaatacccgagtgta
gacccgccgattattaccgtgtcggccagctacaccggcgcctccgccgacgtgatgcag
ggccaggtgactgagccgctcgaagaagcccttaacggtattgcgggcatcaagaacctg
acctccaactcccgcgacggccgcacccagattacggtggagtttgacctcgacgccgac
ctggaaaccgctgccaacgacgtgcgcgacaaggtttcgggcgcgcagggccgccttccg
cgcgacatcgacccgcccatcgtgagcaaggccaacgccgactcgcagccgattgtgatg
acctacctcagctccagcaagcgcaccctgctggaactgaccgactacgccaacaacgcc
ctgaaagagcgcctccagacgattccgggcgtgtcggaggtgcgggtgtacggcgagcgg
aagtactccatgcgcctctggatggaccccgttaagctgtcggcgctgggcgtgagcccc
gtggacgtgcaggccgccctcacccgcgaaaacgtggagctgcccagcggctcggtgcag
ggccagaacacccagctcacgctgcgcacaatgggccgcctgacgtcggtggaggacttc
aacaacctgattatccgcaaagatgcctcgtcgctggtgcggctgtcggatatcggctat
gccgagttgtaccccgaaaacgaccagaccatctttaaagtaaacggcgtgccgatggtg
ggcctggccgtgattccgcagccgggctccaaccagattgacattgccgacgagttcaac
aagcgcattgagctctacggcaaagacttgccgaaagacctggtgctcaagcccggcttc
gacaactcggtgttcatccgcaaatccatcaccgaggtagagcacaccatcatcgaggcc
ttcgtgctggtggtgattatcatcttcttgtttctgcgcgactggcgctccacccttatt
ccggtggtggccattccggtgtcattggtgggtattttcttcgtgatgtatctgctcgac
ttctccatcaacgtgctgacgctgctggccgtggtgctggccattggcctggtggtggac
gacgccattgtggtgctggaaaacatctactcgcgcatcgaggaaggcgaagaccccaaa
acggccgccatcaaaggctccgaggaaattctgatggccgttatcagtaccacggtggtg
ctggcggcggtgttcctgccggtggtattcctgaccggcatcaccgggcgcctattccgc
gagttcgggattgtggtggccggctcggtgctgatttcggcgtttgtatcgctcactctc
acgcccatgatgtgctcggtgctgctcaagcggcaggaaaagcacaactggttttaccgc
aaaaccgagcccttcttccagaagatgatcgggggctaccagagcagcctgcaaaccttt
ttgcgcaaccgctggatggcgtggctggtggtgctgggcacgggcgtgggcatctggttt
ttcatgaaagccattccgtcggagctggcgccggtggaagaccgcagccgcgtcaacgtc
aacgcaacggggccggaaggggcatcttttgagtacatggatgcctacatgaaccagatt
accaagatggccatggactcggccggcagcagcctgagcagcgtgtttgccgtgacttcg
cccggctttggcggcggctccaactccggcacggcccgcgtgctgctgctcgatgccgac
cagcgcccccgcaaccaggaccaagtggcggccggcctcagcgccggcgtgaaaaagctg
accgccgcccgtacgtcggtgtcgcaggaccagagcatcgggggtggcggcggcggcggt
ggtggcctgccggtgcagttcgttatccagacccaggacttcgagaagctgcgggccgca
gtgcccaagttcctcgatgccgcccgccaggaccccaccttccagttcgtggatgtgaac
ctgaagttcaacaagcccgagctgcgcgtaaacatcgaccgcgaaaaggcgcagagcctg
ggcgtgtcggtgcagagcatcagccagacgctgcagtcggggttgagcgggcagcgtttc
ggctatttcatccgggagggcaagcagtaccagatcatcgggcaggtggcgcgcgaagac
cgcaaccagccgctggacgtgcgcctgctgtcggtgaagaacgccgacggccagctcgtg
cagctcgacaacgtgattcgcctcacggaaagcagcacgccgccgcagctctaccgcttc
aaccgctacaactcggccaccttctcggcctcgctggcgcccggcaaaaccctcggcgac
ggtattgcggctatgcagagcatcgccgagaagaacctcgacgacaccttttccaccgag
ctgtcgggtgcctcccgcgacttccaggagagctctagcagcctcgtgtttgccttcggg
ctggcgctggtgctgatttacctggtgctggctgcgcagtttgagagcttccgcgacccg
gtcatcatcatggtgacggtgccgctggcgctgtcgggcgcgctgctcagcctgtggtac
ttcaaccagaccctgaacctgttttcgcagatcggcatcatcatgctggtgggccttgtg
accaaaaacggtatcctcatcgtggaatttgccaaccagcaggtggaaaacggcaaggac
tacatgaccggcctgattgaaggcgccactgcccgcttccgccctattctgatgaccagc
ctgtgcgccatcctgggcattctgccgattgccattgccaccggcgccggcgccctgagc
cgccgggccatgggcattggggtggtaggcggcctgttctttgccaccggcctcacgctc
tacgtagtgcccgtgatgtactcctacttcgccacggccaaaaagcacagccagaagcag
gaggccgccaaaaagaaggccgtaacggcataa
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