Hymenobacter canadensis: O3303_12270
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Entry
O3303_12270 CDS
T09156
Name
(GenBank) O-antigen ligase family protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
hcw
Hymenobacter canadensis
Pathway
hcw00540
Lipopolysaccharide biosynthesis
hcw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
O3303_12270
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hcw01005
]
O3303_12270
Enzymes [BR:
hcw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
O3303_12270
Lipopolysaccharide biosynthesis proteins [BR:
hcw01005
]
Core region
O3303_12270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
DUF1440
Motif
Other DBs
NCBI-ProteinID:
WBA40599
LinkDB
All DBs
Position
complement(2852624..2853916)
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AA seq
430 aa
AA seq
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MTTTSVSPFSLRQLYADGRLSQYLLLLGSLAAVTGLFASRALVALSSVVGVLAVLAQPHL
RQQLRACTRLQTVLGMALMYLFWLLSVVYTSETDIWRHEVYRKLPLVIVPLAFAVAVPLS
LRQRFGVGLLFVGLGTLLALGTLGRYLLDPETANYEISIGHNVPAITGVFHIHFSIMLAL
AFFFALLMRRSVLALPVVRNVLLACSAILFVVMHVLAYRTGLMVLYGMLLLDAGLLVVLR
RRYVLGAVVVLALIGVPLLTYYTLEPIQQRVNVTLDDVNQYRSGRDINDYSLAKRFAAWK
TATVIISQYPVAGVAPADVDAAMLDQYSYQDYGLLPKNWVMTHNQYLEALVGGGIVGLLL
WLFVLFGPFLQPALRQNPYVVHFLLMMGIANLVDTLLQMQIGFSLFVFLYGFLVVAAERQ
TRNTHLAQTA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgactacaacttccgtctcacctttctccctgcgccagctctatgctgatggtcgtttg
tcgcaatacctgttgctgctgggaagcctggccgccgttacggggctgtttgcgtcgcgg
gccctcgtagcgctcagctcggtggtgggggtgctggccgtgctagcccagccgcacctg
cgccagcagctacgggcctgcacccgcctgcaaaccgtgctgggcatggccctgatgtac
ctgttctggctgctgagcgtggtctacacatccgaaaccgacatctggcgccacgaagtc
taccgcaagctgcccctggtaattgtgccgctggcttttgccgtggcggtgcccctgagt
ctgcggcagcggtttggggtagggctcctgttcgtcgggctgggcacgttgctggcgctg
ggtacgctcggccgctacctgctcgacccggaaacggccaactacgaaatcagcatcggc
cacaatgtgccggccatcacgggcgtctttcatatccacttcagcatcatgctggcgctg
gccttcttcttcgcgctgctgatgcggcgtagcgtgctggctctgccggtagtgcgcaac
gtgctgctggcctgctcggccattttgtttgtggtgatgcatgtgctggcttaccgcact
gggctcatggtgctctacggcatgctgctgctcgatgccggcctgctggttgtattgcgg
cgccgctacgtgctgggcgccgtggtagtgctggcgctgattggagtgccgcttctgacc
tactataccctcgaacccatccagcagcgcgtcaacgttaccctcgacgacgtcaaccag
taccgctccggccgcgacatcaatgactactccctggccaagcgctttgccgcctggaaa
acggccaccgtcatcatcagccagtatccggttgcgggcgtggcccccgcagatgtagat
gccgccatgctggaccagtacagctaccaggattacggcttgctgcccaaaaactgggta
atgacccacaatcagtacctggaggccttggtaggcggcggcattgtgggcttattgctc
tggctttttgtgctattcggaccatttttgcaacctgcgctccgccaaaacccgtacgtt
gtacacttcctgctgatgatgggcatcgccaatctggtcgatacgctgttacagatgcag
attgggttcagcctgttcgtgtttctctacggctttctggttgtagctgccgagcggcag
acccgcaatacgcacttggctcaaactgcttga
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