KEGG   Natronorubrum daqingense: BB347_05250
Entry
BB347_05250       CDS       T04679                                 
Name
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hda  Natronorubrum daqingense
Pathway
hda03030  DNA replication
hda03410  Base excision repair
hda03420  Nucleotide excision repair
hda03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BB347_05250
   03410 Base excision repair
    BB347_05250
   03420 Nucleotide excision repair
    BB347_05250
   03430 Mismatch repair
    BB347_05250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hda03032]
    BB347_05250
   03400 DNA repair and recombination proteins [BR:hda03400]
    BB347_05250
Enzymes [BR:hda01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BB347_05250
    6.5.1.6  DNA ligase (ATP or NAD+)
     BB347_05250
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BB347_05250
DNA replication proteins [BR:hda03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    BB347_05250
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     BB347_05250
DNA repair and recombination proteins [BR:hda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BB347_05250
   NER (nucleotide excision repair)
    Other NER factors
     BB347_05250
   MMR (mismatch excision repair)
    Other MMR factors
     BB347_05250
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-ProteinID: APX96070
UniProt: A0A1N7DMV8
LinkDB
Position
1071313..1073121
AA seq 602 aa
MEFATFAQRVAAIEAEPADLEIVTLVTELFEETLETPSLEGVNPGSDAGHGTDSSDDLDT
PDTLEIVARFVQGRVFPAWQSRTLDIGPSTCYEAIARAAGTNVRTDDVEARLADIGEIGE
VAASYDLGGQQGLGAFGGGSSSDDGTDGTDLTVREVYETLSELAAAEGAGSQDRKVDLLF
GLVNRCSSEEARYLARLVLSEMRIGVGEGTVRDAIAEAFDVPGGEVERALQVSNDYGQVA
RVARDDGLEGLTQLDLAVGRPVQAMLAQAGTVTDALEEWECAAVEWKYDGARIQLHYEPD
SDDASETIGVFSRNMEDVTDALPEVVEFAEETLENPVILDGEVVAIDDDGTPLPFQEVLK
RFRRKHDVEKAREDVTVRPVFFDCLHADGDDLLEEPLTTRHDRLEAVLRDGDEQSRSPEN
VDGLSLLWRSDDPEEIESIDAEALEGGHEGIMLKNPESTYSPGRRGKHWRKRKPDVETLD
CVVTGAEWGEGRRATFLGTFELSVLAGEAGDELETVGKVATGITDEKLEELTALLEPYIT
VEEGQEVSLEPEVVFEVGYEEIQTSPTYSSGYALRFPRFVGVRSDKETADADSLERLERL
RG
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggagttcgccacgttcgcccaacgtgtggccgcgatcgaagccgagcccgccgatctc
gagatcgttacactcgtcacggaactgttcgaggagacgctcgagacgccctcgctcgag
ggtgtaaatcccggctccgacgccgggcacggcactgactcgtccgacgacctcgacaca
ccagacaccctcgagatcgtcgcccgattcgtgcaggggcgggtctttccggcctggcag
tcccgaacgctcgatatcgggccgagcacgtgctacgaggcgatcgctcgggcggcgggg
acgaacgtacgaaccgacgacgtcgaggcgcgactcgcggatatcggtgagatcggcgag
gtcgcggcgagttacgacctcggcggacagcagggactcggagccttcggtggcggatcc
tcgagcgacgacggaaccgatggaaccgacctcaccgtccgggaggtctacgagacgctt
tcggaactcgcggcggccgaaggcgccggcagccaggatcgaaaggtcgacctcctcttc
gggctggtcaatcgctgctcgagcgaggaggcgcgttacctcgcacggctcgtcctctcg
gagatgcgcatcggcgtcggcgagggaaccgtccgcgacgcgatcgccgaggcgttcgac
gttcccggcggcgaggtcgaacgcgcgctgcaggtctcgaacgactacgggcaagtcgct
cgagtggcccgcgacgacggcctcgagggcctgacccaactcgacctcgccgtcggccgc
cccgttcaggcgatgctcgcacaggccggcacggtgacggacgccctcgaggagtgggag
tgcgcggccgtcgagtggaagtacgacggcgcacggattcaactgcactacgagcccgat
tcggacgacgcgagcgagacgatcggcgtcttctcgaggaacatggaagacgtcaccgac
gcgctgcccgaagtcgtcgagttcgccgaggagacgctcgagaaccccgtcattttggac
ggcgaagtggtggccatcgacgacgacggcacgccgctcccgttccaggaggtactcaaa
cgcttccggcgaaagcacgacgtcgagaaggctcgggaagacgtgacggttcggccggtg
ttcttcgactgtttgcacgccgacggcgacgacttgctcgaggagccgttgacaactcgc
cacgacaggctcgaggcggtccttcgcgatggggacgaacaatctcgctctcccgagaac
gtggacggactctccctgctctggcggagcgacgaccccgaggagatcgagtcgatcgac
gccgaggcgctcgagggcggccacgaggggatcatgctcaagaatcccgaatcgacgtat
tcgcccggtcgtcgggggaaacactggcgcaaacgcaagccggacgtcgagacgctcgac
tgcgtcgtaacgggggcggagtggggcgaaggtcggcgggcgacgtttttgggtacgttc
gaactctccgtgctggcgggggaggcgggcgacgaactcgagaccgtcggcaaggtcgca
acgggaatcaccgacgaaaaactcgaggagttgaccgcgttgctcgagccctacattact
gtcgaggaggggcaggaagtctccctcgagcccgaagtcgtcttcgaggtgggatacgag
gagatccagacctcgccgacgtactcttcgggctacgccctgcggttcccgcggttcgtg
ggggtgcgttcggacaaggagacggcggacgcggattccctcgagcgactcgaacgactt
cgcgggtga

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